8K8E
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![BU of 8k8e by Molmil](/molmil-images/mine/8k8e) | Human gamma-secretase in complex with a substrate mimetic | Descriptor: | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Shi, Y.G, Zhou, R, Wolfe, M.S. | Deposit date: | 2023-07-29 | Release date: | 2024-01-31 | Last modified: | 2024-02-28 | Method: | ELECTRON MICROSCOPY (2.6 Å) | Cite: | Familial Alzheimer mutations stabilize synaptotoxic gamma-secretase-substrate complexes. Cell Rep, 43, 2024
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4GJP
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![BU of 4gjp by Molmil](/molmil-images/mine/4gjp) | Crystal structure of the TAL effector dHax3 bound to dsDNA containing repetitive methyl-CpG | Descriptor: | DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*(5CM)P*GP*TP*CP*TP*CP*T)-3'), Hax3, ... | Authors: | Yan, N, Deng, D, Yan, C.Y, Yin, P, Pan, X.J, Shi, Y.G. | Deposit date: | 2012-08-10 | Release date: | 2012-10-03 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.94 Å) | Cite: | Crystal structure of a protein complex To be Published
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4GJR
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![BU of 4gjr by Molmil](/molmil-images/mine/4gjr) | Crystal structure of the TAL effector dHax3 bound to methylated dsDNA | Descriptor: | DNA (5'-D(*AP*GP*GP*GP*AP*GP*GP*TP*AP*GP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*(5CM)P*TP*AP*(5CM)P*CP*TP*CP*(5CM)P*CP*T)-3'), Hax3 | Authors: | Yan, N, Deng, D, Yan, C.Y, Yin, P, Pan, X.J, Shi, Y.G. | Deposit date: | 2012-08-10 | Release date: | 2012-10-03 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Crystal structure of a protein complex To be Published
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7D7F
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![BU of 7d7f by Molmil](/molmil-images/mine/7d7f) | Structure of PKD1L3-CTD/PKD2L1 in calcium-bound state | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Polycystic kidney disease 2-like 1 protein, ... | Authors: | Su, Q, Shi, Y.G. | Deposit date: | 2020-10-03 | Release date: | 2021-09-01 | Method: | ELECTRON MICROSCOPY (3 Å) | Cite: | Structural basis for Ca 2+ activation of the heteromeric PKD1L3/PKD2L1 channel. Nat Commun, 12, 2021
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2Y1Q
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![BU of 2y1q by Molmil](/molmil-images/mine/2y1q) | Crystal Structure of ClpC N-terminal Domain | Descriptor: | NEGATIVE REGULATOR OF GENETIC COMPETENCE CLPC/MECB, SULFATE ION | Authors: | Wang, F, Mei, Z.Q, Wang, J.W, Shi, Y.G. | Deposit date: | 2010-12-10 | Release date: | 2011-03-16 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Structure and Mechanism of the Hexameric Meca-Clpc Molecular Machine. Nature, 471, 2011
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2Y1R
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![BU of 2y1r by Molmil](/molmil-images/mine/2y1r) | Structure of MecA121 & ClpC N-domain complex | Descriptor: | ADAPTER PROTEIN MECA 1, NEGATIVE REGULATOR OF GENETIC COMPETENCE CLPC/MECB, S,R MESO-TARTARIC ACID | Authors: | Wang, F, Mei, Z.Q, Wang, J.W, Shi, Y.G. | Deposit date: | 2010-12-10 | Release date: | 2011-03-16 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (2.595 Å) | Cite: | Structure and Mechanism of the Hexameric Meca-Clpc Molecular Machine. Nature, 471, 2011
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4GG4
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![BU of 4gg4 by Molmil](/molmil-images/mine/4gg4) | Crystal structure of the TAL effector dHax3 bound to specific DNA-RNA hybrid | Descriptor: | DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3, RNA (5'-R(*AP*GP*AP*GP*AP*GP*AP*UP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3') | Authors: | Yin, P, Deng, D, Yan, C.Y, Pan, X.J, Yan, N, Shi, Y.G. | Deposit date: | 2012-08-05 | Release date: | 2012-10-03 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.501 Å) | Cite: | Specific DNA-RNA hybrid recognition by TAL effectors Cell Rep, 2, 2012
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3PXI
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![BU of 3pxi by Molmil](/molmil-images/mine/3pxi) | Structure of MecA108:ClpC | Descriptor: | Adapter protein mecA 1, Negative regulator of genetic competence ClpC/MecB | Authors: | Wang, F, Mei, Z.Q, Wang, J.W, Shi, Y.G. | Deposit date: | 2010-12-09 | Release date: | 2011-03-16 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (6.926 Å) | Cite: | Structure and mechanism of the hexameric MecA-ClpC molecular machine. Nature, 471, 2011
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4F6P
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![BU of 4f6p by Molmil](/molmil-images/mine/4f6p) | |
4DJI
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![BU of 4dji by Molmil](/molmil-images/mine/4dji) | Structure of glutamate-GABA antiporter GadC | Descriptor: | Probable glutamate/gamma-aminobutyrate antiporter | Authors: | Ma, D, Lu, P.L, Yan, C.Y, Fan, C, Yin, P, Wang, J.W, Shi, Y.G. | Deposit date: | 2012-02-02 | Release date: | 2012-03-14 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (3.187 Å) | Cite: | Structure and mechanism of a glutamate-GABA antiporter Nature, 483, 2012
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4DJK
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![BU of 4djk by Molmil](/molmil-images/mine/4djk) | Structure of glutamate-GABA antiporter GadC | Descriptor: | Probable glutamate/gamma-aminobutyrate antiporter | Authors: | Ma, D, Lu, P.L, Yan, C.Y, Fan, C, Yin, P, Wang, J.W, Shi, Y.G. | Deposit date: | 2012-02-02 | Release date: | 2012-03-14 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (3.097 Å) | Cite: | Structure and mechanism of a glutamate-GABA antiporter Nature, 483, 2012
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3PXG
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![BU of 3pxg by Molmil](/molmil-images/mine/3pxg) | Structure of MecA121 and ClpC1-485 complex | Descriptor: | Adapter protein mecA 1, Negative regulator of genetic competence ClpC/MecB | Authors: | Wang, F, Mei, Z.Q, Wang, J.W, Shi, Y.G. | Deposit date: | 2010-12-09 | Release date: | 2011-03-16 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.654 Å) | Cite: | Structure and mechanism of the hexameric MecA-ClpC molecular machine. Nature, 471, 2011
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4M9R
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![BU of 4m9r by Molmil](/molmil-images/mine/4m9r) | Crystal structure of CED-3 | Descriptor: | Cell death protein 3 | Authors: | Xu, Y, Jeffrey, P.D, Shi, Y.G. | Deposit date: | 2013-08-15 | Release date: | 2013-10-09 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.656 Å) | Cite: | Mechanistic insights into CED-4-mediated activation of CED-3 Genes Dev., 27, 2013
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3JCP
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![BU of 3jcp by Molmil](/molmil-images/mine/3jcp) | Structure of yeast 26S proteasome in M2 state derived from Titan dataset | Descriptor: | 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... | Authors: | Luan, B, Huang, X.L, Wu, J.P, Shi, Y.G, Wang, F. | Deposit date: | 2016-01-06 | Release date: | 2016-06-15 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (4.6 Å) | Cite: | Structure of an endogenous yeast 26S proteasome reveals two major conformational states. Proc.Natl.Acad.Sci.USA, 113, 2016
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4DDP
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![BU of 4ddp by Molmil](/molmil-images/mine/4ddp) | |
4F6O
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![BU of 4f6o by Molmil](/molmil-images/mine/4f6o) | |
5FCG
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![BU of 5fcg by Molmil](/molmil-images/mine/5fcg) | |
3V6P
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![BU of 3v6p by Molmil](/molmil-images/mine/3v6p) | Crystal structure of the DNA-binding domain of dHax3, a TAL effector | Descriptor: | dHax3 | Authors: | Deng, D, Yan, C.Y, Pan, X.J, Wang, J.W, Shi, Y.G, Yan, N. | Deposit date: | 2011-12-20 | Release date: | 2012-01-18 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.401 Å) | Cite: | Structural Basis for Sequence-Specific Recognition of DNA by TAL Effectors Science, 2012
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3V6T
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![BU of 3v6t by Molmil](/molmil-images/mine/3v6t) | Crystal structure of the DNA-bound dHax3, a TAL effector, at 1.85 angstrom | Descriptor: | DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), dHax3 | Authors: | Deng, D, Yan, C.Y, Pan, X.J, Wang, J.W, Yan, N, Shi, Y.G. | Deposit date: | 2011-12-20 | Release date: | 2012-01-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structural Basis for Sequence-Specific Recognition of DNA by TAL Effectors Science, 2012
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4M9X
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![BU of 4m9x by Molmil](/molmil-images/mine/4m9x) | Crystal structure of CED-4 bound CED-3 fragment | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, CED-3 fragment, Cell death protein 4, ... | Authors: | Huang, W.J, Jinag, T.Y, Choi, W.Y, Wang, J.W, Shi, Y.G. | Deposit date: | 2013-08-15 | Release date: | 2013-10-23 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (3.344 Å) | Cite: | Mechanistic insights into CED-4-mediated activation of CED-3. Genes Dev., 27, 2013
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4M9Y
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![BU of 4m9y by Molmil](/molmil-images/mine/4m9y) | Crystal structure of CED-4 bound CED-3 fragment | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, CED-3 fragment, Cell death protein 4, ... | Authors: | Huang, W.J, Jinag, T.Y, Choi, W.Y, Wang, J.W, Shi, Y.G. | Deposit date: | 2013-08-15 | Release date: | 2013-10-23 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (4.2 Å) | Cite: | Mechanistic insights into CED-4-mediated activation of CED-3. Genes Dev., 27, 2013
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3JCO
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![BU of 3jco by Molmil](/molmil-images/mine/3jco) | Structure of yeast 26S proteasome in M1 state derived from Titan dataset | Descriptor: | 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... | Authors: | Luan, B, Huang, X.L, Wu, J.P, Shi, Y.G, Wang, F. | Deposit date: | 2016-01-06 | Release date: | 2016-06-15 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (4.8 Å) | Cite: | Structure of an endogenous yeast 26S proteasome reveals two major conformational states. Proc.Natl.Acad.Sci.USA, 113, 2016
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4M9S
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![BU of 4m9s by Molmil](/molmil-images/mine/4m9s) | crystal structure of CED-4 bound CED-3 fragment | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, CED-3 fragment, Cell death protein 4, ... | Authors: | Huang, W.J, Jinag, T.Y, Choi, W.Y, Wang, J.W, Shi, Y.G. | Deposit date: | 2013-08-15 | Release date: | 2013-10-23 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (3.207 Å) | Cite: | Mechanistic insights into CED-4-mediated activation of CED-3. Genes Dev., 27, 2013
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4M9Z
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![BU of 4m9z by Molmil](/molmil-images/mine/4m9z) | Crystal structure of CED-4 bound CED-3 fragment | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, CED-3 fragment, Cell death protein 4, ... | Authors: | Huang, W.J, Jinag, T.Y, Choi, W.Y, Wang, J.W, Shi, Y.G. | Deposit date: | 2013-08-15 | Release date: | 2013-10-23 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (3.405 Å) | Cite: | Mechanistic insights into CED-4-mediated activation of CED-3. Genes Dev., 27, 2013
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4HZU
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![BU of 4hzu by Molmil](/molmil-images/mine/4hzu) | Structure of a bacterial energy-coupling factor transporter | Descriptor: | Energy-coupling factor transporter ATP-binding protein EcfA 1, Energy-coupling factor transporter ATP-binding protein EcfA 2, Energy-coupling factor transporter transmembrane protein EcfT, ... | Authors: | Wang, T.L, Fu, G.B, Pan, X.J, Shi, Y.G. | Deposit date: | 2012-11-15 | Release date: | 2013-04-17 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (3.53 Å) | Cite: | Structure of a bacterial energy-coupling factor transporter. Nature, 497, 2013
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