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PDB: 1971 件

2LUY
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BU of 2luy by Molmil
Solution structure of the tandem zinc finger domain of fission yeast Stc1
分子名称: Meiotic chromosome segregation protein P8B7.28c, ZINC ION
著者He, C, Shi, Y, Bayne, E, Wu, J.
登録日2012-06-22
公開日2013-05-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural analysis of Stc1 provides insights into the coupling of RNAi and chromatin modification.
Proc.Natl.Acad.Sci.USA, 110, 2013
3SIP
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BU of 3sip by Molmil
Crystal structure of drICE and dIAP1-BIR1 complex
分子名称: Apoptosis 1 inhibitor, Caspase, ZINC ION
著者Li, X, Wang, J, Shi, Y.
登録日2011-06-20
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.496 Å)
主引用文献Structural mechanisms of DIAP1 auto-inhibition and DIAP1-mediated inhibition of drICE.
Nat Commun, 2, 2011
3UYW
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BU of 3uyw by Molmil
Crystal structures of globular head of 2009 pandemic H1N1 hemagglutinin
分子名称: 2-AMINOETHANESULFONIC ACID, Hemagglutinin
著者Xuan, C.L, Shi, Y, Qi, J.X, Xiao, H.X, Gao, G.F.
登録日2011-12-06
公開日2012-10-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Structural vaccinology: structure-based design of influenza A virus hemagglutinin subtype-specific subunit vaccines
Protein Cell, 2, 2011
2JXN
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BU of 2jxn by Molmil
Solution Structure of S. cerevisiae PDCD5-like Protein Ymr074cp
分子名称: S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, Uncharacterized protein YMR074C
著者Hong, J, Zhang, J, Liu, Z, Shi, Y, Wu, J.
登録日2007-11-23
公開日2008-12-02
最終更新日2021-10-20
実験手法SOLUTION NMR
主引用文献Solution Structure and Dynamics of S. cerevisiae PDCD5-like Protein Ymr074cp Determined by Heteronuclear NMR Spectroscopy
To be Published
3U83
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BU of 3u83 by Molmil
Crystal structure of nectin-1
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Poliovirus receptor-related protein 1
著者Zhang, N, Yan, J, Lu, G, Guo, Z, Fan, Z, Wang, J, Shi, Y, Qi, J, Gao, G.F.
登録日2011-10-15
公開日2012-03-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion.
Nat Commun, 2, 2011
2KXJ
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BU of 2kxj by Molmil
Solution structure of UBX domain of human UBXD2 protein
分子名称: UBX domain-containing protein 4
著者Wu, Q, Huang, H, Zhang, J, Hu, Q, Wu, J, Shi, Y.
登録日2010-05-06
公開日2011-05-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution strcture of UBX domain of human UBXD2 protein
To be Published
3UYX
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BU of 3uyx by Molmil
Crystal structures of globular head of 2009 pandemic H1N1 hemagglutinin
分子名称: Hemagglutinin, NITRATE ION
著者Xuan, C.L, Shi, Y, Qi, J.X, Xiao, H.X, Gao, G.F.
登録日2011-12-06
公開日2012-10-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural vaccinology: structure-based design of influenza A virus hemagglutinin subtype-specific subunit vaccines
Protein Cell, 2, 2011
2NRF
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BU of 2nrf by Molmil
Crystal Structure of GlpG, a Rhomboid family intramembrane protease
分子名称: Protein GlpG
著者Wu, Z, Yan, N, Feng, L, Yan, H, Gu, L, Shi, Y.
登録日2006-11-02
公開日2006-11-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural analysis of a rhomboid family intramembrane protease reveals a gating mechanism for substrate entry.
Nat.Struct.Mol.Biol., 13, 2006
2NWM
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BU of 2nwm by Molmil
Solution structure of the first SH3 domain of human Vinexin and its interaction with the peptides from Vinculin
分子名称: Vinexin
著者Zhang, J, Yao, B, Wu, J, Shi, Y.
登録日2006-11-15
公開日2007-04-24
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the first SH3 domain of human vinexin and its interaction with vinculin peptides
Biochem.Biophys.Res.Commun., 357, 2007
2K7N
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BU of 2k7n by Molmil
Solution structure of the PPIL1 bound to a fragment of SKIP
分子名称: Peptidyl-prolyl cis-trans isomerase-like 1
著者Wang, X, Wu, J, Shi, Y.
登録日2008-08-17
公開日2009-09-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of PPIL1 Bound to the Fragment of SKIP Shown Disorder-Order Transition Induced by Protein Binding
To be Published
3U82
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BU of 3u82 by Molmil
Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion
分子名称: Envelope glycoprotein D, Poliovirus receptor-related protein 1
著者Zhang, N, Yan, J, Lu, G, Guo, Z, Fan, Z, Wang, J, Shi, Y, Qi, J, Gao, G.F.
登録日2011-10-15
公開日2012-03-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.164 Å)
主引用文献Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion.
Nat Commun, 2, 2011
3SIQ
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BU of 3siq by Molmil
Crystal Structure of autoinhibited dIAP1-BIR1 domain
分子名称: Apoptosis 1 inhibitor, ZINC ION
著者Li, X, Wang, J, Shi, Y.
登録日2011-06-20
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural mechanisms of DIAP1 auto-inhibition and DIAP1-mediated inhibition of drICE.
Nat Commun, 2, 2011
3SIR
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BU of 3sir by Molmil
Crystal Structure of drICE
分子名称: Caspase
著者Li, X, Wang, J, Shi, Y.
登録日2011-06-20
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structural mechanisms of DIAP1 auto-inhibition and DIAP1-mediated inhibition of drICE.
Nat Commun, 2, 2011
3T7I
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BU of 3t7i by Molmil
Crystal structure of Se-Met Rtt107p (residues 820-1070)
分子名称: Regulator of Ty1 transposition protein 107
著者Li, X, Li, F, Wu, J, Shi, Y.
登録日2011-07-30
公開日2012-02-15
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
5TDH
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BU of 5tdh by Molmil
The crystal structure of the dominant negative mutant G protein alpha(i)-1-beta-1-gamma-2 G203A/A326S
分子名称: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Liu, P, Jia, M.-Z, Zhou, X.E, de Waal, P.W, Dickson, B.M, Liu, B, Hou, L, Yin, Y.-T, Kang, Y.-Y, Shi, Y, Melcher, K, Xu, H.E, Jiang, Y.
登録日2016-09-19
公開日2016-11-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structural basis of the dominant negative phenotype of the G alpha i1 beta 1 gamma 2 G203A/A326S heterotrimer
Acta Pharmacol.Sin., 37, 2016
7JVB
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BU of 7jvb by Molmil
Crystal structure of the SARS-CoV-2 spike receptor-binding domain (RBD) with nanobody Nb20
分子名称: CACODYLATE ION, Nanobody Nb20, Spike protein S1
著者Xiang, Y, Xiao, Z, Liu, H, Sang, Z, Schneidman-Duhovny, D, Zhang, C, Shi, Y.
登録日2020-08-20
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.287 Å)
主引用文献Versatile and multivalent nanobodies efficiently neutralize SARS-CoV-2.
Science, 370, 2020
2JR7
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BU of 2jr7 by Molmil
Solution structure of human DESR1
分子名称: DPH3 homolog, ZINC ION
著者Wu, F, Wu, J, Shi, Y.
登録日2007-06-21
公開日2008-03-25
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution structure of human DESR1, a CSL zinc-binding protein
Proteins, 71, 2008
3T7K
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BU of 3t7k by Molmil
Complex structure of Rtt107p and phosphorylated histone H2A
分子名称: Histone H2A.1, Regulator of Ty1 transposition protein 107
著者Li, X, Li, F, Wu, J, Shi, Y.
登録日2011-07-30
公開日2012-02-15
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.028 Å)
主引用文献Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
3T7J
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BU of 3t7j by Molmil
Crystal structure of Rtt107p (residues 820-1070)
分子名称: Regulator of Ty1 transposition protein 107
著者Li, X, Li, F, Wu, J, Shi, Y.
登録日2011-07-30
公開日2012-02-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.042 Å)
主引用文献Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
2ISM
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BU of 2ism by Molmil
Crystal structure of the putative oxidoreductase (glucose dehydrogenase) (TTHA0570) from thermus theromophilus HB8
分子名称: CALCIUM ION, CHLORIDE ION, Putative oxidoreductase
著者Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Ebihara, A, Shinkai, A, Nakagawa, N, Shimizu, N, Yamamoto, M, Kuramitsu, S, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-10-18
公開日2007-11-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of the Putative Oxidoreductase (Glucose Dehydrogenase) (TTHA0570) from Thermus Theromophilus HB8
To be Published
3X29
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BU of 3x29 by Molmil
CRYSTAL STRUCTURE of MOUSE CLAUDIN-19 IN COMPLEX with C-TERMINAL FRAGMENT OF CLOSTRIDIUM PERFRINGENS ENTEROTOXIN
分子名称: Claudin-19, Heat-labile enterotoxin B chain
著者Saitoh, Y, Suzuki, H, Tani, K, Nishikawa, K, Irie, K, Ogura, Y, Tamura, A, Tsukita, S, Fujiyoshi, Y.
登録日2014-12-13
公開日2015-01-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural insight into tight junction disassembly by Clostridium perfringens enterotoxin
Science, 347, 2015
7EVO
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BU of 7evo by Molmil
The cryo-EM structure of the human 17S U2 snRNP
分子名称: HIV Tat-specific factor 1, PHD finger-like domain-containing protein 5A, RNA helicase, ...
著者Zhang, X, Zhan, X, Shi, Y.
登録日2021-05-21
公開日2022-08-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structural insights into branch site proofreading by human spliceosome.
Nat.Struct.Mol.Biol., 2024
1T7H
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BU of 1t7h by Molmil
X-ray structure of [Lys(-2)-Arg(-1)-des(17-21)]-endothelin-1 peptide
分子名称: Endothelin-1
著者Hoh, F, Cerdan, R, Kaas, Q, Nishi, Y, Chiche, L, Kubo, S, Chino, N, Kobayashi, Y, Dumas, C, Aumelas, A.
登録日2004-05-10
公開日2004-12-21
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献High-resolution X-ray structure of the unexpectedly stable dimer of the [Lys(-2)-Arg(-1)-des(17-21)]endothelin-1 peptide
Biochemistry, 43, 2004
7EVN
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BU of 7evn by Molmil
The cryo-EM structure of the DDX42-SF3b complex
分子名称: ATP-dependent RNA helicase DDX42, PHD finger-like domain-containing protein 5A, Splicing factor 3B subunit 1, ...
著者Zhang, X, Zhan, X, Shi, Y.
登録日2021-05-21
公開日2022-08-03
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural insights into branch site proofreading by human spliceosome
Nat.Struct.Mol.Biol., 2024
2Y1Q
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BU of 2y1q by Molmil
Crystal Structure of ClpC N-terminal Domain
分子名称: NEGATIVE REGULATOR OF GENETIC COMPETENCE CLPC/MECB, SULFATE ION
著者Wang, F, Mei, Z.Q, Wang, J.W, Shi, Y.G.
登録日2010-12-10
公開日2011-03-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and Mechanism of the Hexameric Meca-Clpc Molecular Machine.
Nature, 471, 2011

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