4F13
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![BU of 4f13 by Molmil](/molmil-images/mine/4f13) | Alginate lyase A1-III Y246F complexed with tetrasaccharide | 分子名称: | 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, Alginate lyase, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid | 著者 | Mikami, B, Ban, M, Suzuki, S, Yoon, H.-J, Miyake, O, Yamasaki, M, Ogura, K, Maruyama, Y, Hashimoto, W, Murata, K. | 登録日 | 2012-05-06 | 公開日 | 2012-06-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.208 Å) | 主引用文献 | Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III Acta Crystallogr.,Sect.D, 68, 2012
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4F10
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![BU of 4f10 by Molmil](/molmil-images/mine/4f10) | Alginate lyase A1-III H192A complexed with tetrasaccharide | 分子名称: | 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, Alginate lyase, alpha-L-gulopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid | 著者 | Mikami, B, Ban, M, Suzuki, S, Yoon, H.-J, Miyake, O, Yamasaki, M, Ogura, K, Maruyama, Y, Hashimoto, W, Murata, K. | 登録日 | 2012-05-05 | 公開日 | 2012-06-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III Acta Crystallogr.,Sect.D, 68, 2012
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4MMH
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![BU of 4mmh by Molmil](/molmil-images/mine/4mmh) | Crystal structure of heparan sulfate lyase HepC from Pedobacter heparinus | 分子名称: | CALCIUM ION, Heparinase III protein | 著者 | Maruyama, Y, Nakamichi, Y, Mikami, B, Murata, K, Hashimoto, W. | 登録日 | 2013-09-09 | 公開日 | 2014-01-29 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal Structure of Pedobacter heparinus Heparin Lyase Hep III with the Active Site in a Deep Cleft Biochemistry, 53, 2014
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4MMI
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![BU of 4mmi by Molmil](/molmil-images/mine/4mmi) | Crystal structure of heparan sulfate lyase HepC mutant from Pedobacter heparinus | 分子名称: | CALCIUM ION, Heparinase III protein | 著者 | Maruyama, Y, Nakamichi, Y, Mikami, B, Murata, K, Hashimoto, W. | 登録日 | 2013-09-09 | 公開日 | 2014-01-29 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal Structure of Pedobacter heparinus Heparin Lyase Hep III with the Active Site in a Deep Cleft Biochemistry, 53, 2014
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1FP3
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![BU of 1fp3 by Molmil](/molmil-images/mine/1fp3) | CRYSTAL STRUCTURE OF N-ACYL-D-GLUCOSAMINE 2-EPIMERASE FROM PORCINE KIDNEY | 分子名称: | N-ACYL-D-GLUCOSAMINE 2-EPIMERASE | 著者 | Itoh, T, Mikami, B, Maru, I, Ohta, Y, Hashimoto, W, Murata, K. | 登録日 | 2000-08-30 | 公開日 | 2000-11-22 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of N-acyl-D-glucosamine 2-epimerase from porcine kidney at 2.0 A resolution. J.Mol.Biol., 303, 2000
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7CJ3
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![BU of 7cj3 by Molmil](/molmil-images/mine/7cj3) | Crystal structure of the transmembrane domain of Salpingoeca rosetta rhodopsin phosphodiesterase | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Phosphodiesterase, RETINAL | 著者 | Ikuta, T, Shihoya, W, Yamashita, K, Nureki, O. | 登録日 | 2020-07-09 | 公開日 | 2020-11-25 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Structural insights into the mechanism of rhodopsin phosphodiesterase. Nat Commun, 11, 2020
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7D7Q
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![BU of 7d7q by Molmil](/molmil-images/mine/7d7q) | Crystal structure of the transmembrane domain and linker region of Salpingoeca rosetta rhodopsin phosphodiesterase | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Phosphodiesterase, RETINAL | 著者 | Ikuta, T, Shihoya, W, Yamashita, K, Nureki, O. | 登録日 | 2020-10-05 | 公開日 | 2020-11-18 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3.5 Å) | 主引用文献 | Structural insights into the mechanism of rhodopsin phosphodiesterase. Nat Commun, 11, 2020
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7D7P
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![BU of 7d7p by Molmil](/molmil-images/mine/7d7p) | Crystal structure of the phosphodiesterase domain of Salpingoeca rosetta rhodopsin phosphodiesterase | 分子名称: | 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... | 著者 | Ikuta, T, Shihoya, W, Yamashita, K, Nureki, O. | 登録日 | 2020-10-05 | 公開日 | 2020-11-18 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structural insights into the mechanism of rhodopsin phosphodiesterase. Nat Commun, 11, 2020
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8IY6
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![BU of 8iy6 by Molmil](/molmil-images/mine/8iy6) | ETB-Gi complex bound to Endotheline-1, focused on receptor | 分子名称: | Endothelin type B receptor, Endothelin-1 | 著者 | Sano, F.K, Akasaka, H, Shihoya, W, Nureki, O. | 登録日 | 2023-04-04 | 公開日 | 2023-08-16 | 最終更新日 | 2023-12-06 | 実験手法 | ELECTRON MICROSCOPY (3.13 Å) | 主引用文献 | Cryo-EM structure of the endothelin-1-ET B -G i complex. Elife, 12, 2023
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8IY5
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![BU of 8iy5 by Molmil](/molmil-images/mine/8iy5) | ETB-Gi complex bound to endothelin-1 | 分子名称: | Endothelin type B receptor, Endothelin-1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... | 著者 | Sano, F.K, Akasaka, H, Shihoya, W, Nureki, O. | 登録日 | 2023-04-04 | 公開日 | 2023-08-16 | 最終更新日 | 2023-12-06 | 実験手法 | ELECTRON MICROSCOPY (2.8 Å) | 主引用文献 | Cryo-EM structure of the endothelin-1-ET B -G i complex. Elife, 12, 2023
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7CLJ
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![BU of 7clj by Molmil](/molmil-images/mine/7clj) | Crystal structure of Thermoplasmatales archaeon heliorhodopsin E108D mutant | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, RETINAL, SULFATE ION, ... | 著者 | Tanaka, T, Shihoya, W, Yamashita, K, Nureki, O. | 登録日 | 2020-07-21 | 公開日 | 2020-09-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Structural basis for unique color tuning mechanism in heliorhodopsin. Biochem.Biophys.Res.Commun., 533, 2020
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8J97
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![BU of 8j97 by Molmil](/molmil-images/mine/8j97) | Structure of Muscarinic receptor (M2R) in complex with beta-arrestin1 (Local refine, cross-linked) | 分子名称: | Beta-arrestin-1, Fab30 Heavy Chain, Fab30 Light Chain, ... | 著者 | Maharana, J, Sano, F.K, Shihoya, W, Banerjee, R, Nureki, O, Shukla, A.K. | 登録日 | 2023-05-02 | 公開日 | 2023-12-27 | 最終更新日 | 2024-01-17 | 実験手法 | ELECTRON MICROSCOPY (3.2 Å) | 主引用文献 | Molecular insights into atypical modes of beta-arrestin interaction with seven transmembrane receptors. Science, 383, 2024
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8JAF
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![BU of 8jaf by Molmil](/molmil-images/mine/8jaf) | Structure of Muscarinic receptor (M2R) in complex with beta-arrestin1 (Local Refine, non-cross linked) | 分子名称: | Beta-arrestin-1, Fab30 heavy chain, Fab30 light chain, ... | 著者 | Maharana, J, Sano, F.K, Shihoya, W, Banerjee, R, Nureki, O, Shukla, A.K. | 登録日 | 2023-05-05 | 公開日 | 2023-12-27 | 最終更新日 | 2024-01-17 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Molecular insights into atypical modes of beta-arrestin interaction with seven transmembrane receptors. Science, 383, 2024
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6JBO
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![BU of 6jbo by Molmil](/molmil-images/mine/6jbo) | Crystal structure of EfeO-like protein Algp7 containing samarium ion | 分子名称: | 1,2-ETHANEDIOL, Alginate-binding protein, CITRIC ACID | 著者 | Okumura, K, Takase, R, Maruyama, Y, Mikami, B, Murata, K, Hashimoto, W. | 登録日 | 2019-01-26 | 公開日 | 2020-01-29 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.88 Å) | 主引用文献 | Rare metal binding by a cell-surface component of bacterial EfeUOB iron importer To Be Published
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6JBN
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![BU of 6jbn by Molmil](/molmil-images/mine/6jbn) | Crystal structure of Sphingomonas sp. A1 peroxidase EfeB responsible for import of iron | 分子名称: | 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, OXYGEN MOLECULE, ... | 著者 | Okumura, K, Takase, R, Mikami, B, Murata, K, Hashimoto, W. | 登録日 | 2019-01-26 | 公開日 | 2020-01-29 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Rare metal binding by a cell-surface component of bacterial EfeUOB iron importer To Be Published
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6JHX
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![BU of 6jhx by Molmil](/molmil-images/mine/6jhx) | |
6INZ
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![BU of 6inz by Molmil](/molmil-images/mine/6inz) | Crystal structure of solute-binding protein complexed with unsaturated hyaluronan disaccharide | 分子名称: | 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Extracellular solute-binding protein family 1, ... | 著者 | Oiki, S, Mikami, B, Murata, K, Hashimoto, W. | 登録日 | 2018-10-29 | 公開日 | 2019-09-11 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.289 Å) | 主引用文献 | Substrate recognition by bacterial solute-binding protein is responsible for import of extracellular hyaluronan and chondroitin sulfate from the animal host. Biosci.Biotechnol.Biochem., 83, 2019
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6K1Q
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![BU of 6k1q by Molmil](/molmil-images/mine/6k1q) | Human endothelin receptor type-B in complex with inverse agonist IRL2500 | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2~{S})-2-[[(2~{R})-2-[(3,5-dimethylphenyl)carbonyl-methyl-amino]-3-(4-phenylphenyl)propanoyl]amino]-3-(1~{H}-indol-3-yl)propanoic acid, Endothelin B receptor,Endolysin,Endothelin B receptor, ... | 著者 | Nagiri, C, Shihoya, W, Nureki, O. | 登録日 | 2019-05-11 | 公開日 | 2019-07-17 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structure of human endothelin ETBreceptor in complex with peptide inverse agonist IRL2500. Commun Biol, 2, 2019
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3VLW
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![BU of 3vlw by Molmil](/molmil-images/mine/3vlw) | Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with mannuronate-guluronate disaccharide | 分子名称: | AlgQ1, CALCIUM ION, GLYCEROL, ... | 著者 | Nishitani, Y, Maruyama, Y, Itoh, T, Mikami, B, Hashimoto, W, Murata, K. | 登録日 | 2011-12-05 | 公開日 | 2012-01-25 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter Biochemistry, 51, 2012
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3VLU
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![BU of 3vlu by Molmil](/molmil-images/mine/3vlu) | Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with saturated trimannuronate | 分子名称: | AlgQ1, CALCIUM ION, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid | 著者 | Nishitani, Y, Maruyama, Y, Itoh, T, Mikami, B, Hashimoto, W, Murata, K. | 登録日 | 2011-12-05 | 公開日 | 2012-01-25 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter Biochemistry, 51, 2012
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3VLV
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![BU of 3vlv by Molmil](/molmil-images/mine/3vlv) | Crystal structure of Sphingomonas sp. A1 alginate-binding ptotein AlgQ1 in complex with unsaturated triguluronate | 分子名称: | 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid, AlgQ1, CALCIUM ION | 著者 | Nishitani, Y, Maruyama, Y, Itoh, T, Mikami, B, Hashimoto, W, Murata, K. | 登録日 | 2011-12-05 | 公開日 | 2012-01-25 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter Biochemistry, 51, 2012
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7E4S
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![BU of 7e4s by Molmil](/molmil-images/mine/7e4s) | Crystal structure of Lactobacillus rhamnosus 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI complexed with HEPES | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-dehydro-4-deoxy-D-glucuronate isomerase, ZINC ION | 著者 | Yamamoto, Y, Takase, R, Mikami, B, Hashimoto, W. | 登録日 | 2021-02-15 | 公開日 | 2022-02-23 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.79 Å) | 主引用文献 | Crystal structures of Lacticaseibacillus 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI in complex with substrate analogs J.Appl.Glyosci., 2023
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7D20
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![BU of 7d20 by Molmil](/molmil-images/mine/7d20) | Cryo-EM structure of SET8-CENP-A-nucleosome complex | 分子名称: | DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Ho, C.-H, Takizawa, Y, Kobayashi, W, Arimura, Y, Kurumizaka, H. | 登録日 | 2020-09-15 | 公開日 | 2021-02-10 | 最終更新日 | 2024-03-27 | 実験手法 | ELECTRON MICROSCOPY (3 Å) | 主引用文献 | Structural basis of nucleosomal histone H4 lysine 20 methylation by SET8 methyltransferase. Life Sci Alliance, 4, 2021
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7D1Z
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![BU of 7d1z by Molmil](/molmil-images/mine/7d1z) | Cryo-EM structure of SET8-nucleosome complex | 分子名称: | DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Ho, C.-H, Takizawa, Y, Kobayashi, W, Arimura, Y, Kurumizaka, H. | 登録日 | 2020-09-15 | 公開日 | 2021-02-10 | 最終更新日 | 2024-03-27 | 実験手法 | ELECTRON MICROSCOPY (3.15 Å) | 主引用文献 | Structural basis of nucleosomal histone H4 lysine 20 methylation by SET8 methyltransferase. Life Sci Alliance, 4, 2021
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7FGT
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![BU of 7fgt by Molmil](/molmil-images/mine/7fgt) | |