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PDB: 2085 件

2DT9
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Crystal structure of the regulatory subunit of aspartate kinase from Thermus flavus
分子名称: ACETATE ION, Aspartokinase, THREONINE
著者Yoshida, A, Tomita, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M.
登録日2006-07-11
公開日2007-07-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures of the regulatory subunit of Thr-sensitive aspartate kinase from Thermus thermophilus
Febs J., 276, 2009
1X6B
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Solution structures of the SH3 domain of human rho guanine exchange factor (GEF) 16
分子名称: Rho guanine exchange factor (GEF) 16
著者Sato, M, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the SH3 domain of human rho guanine exchange factor (GEF) 16
To be Published
1X6H
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Solution structures of the C2H2 type zinc finger domain of human Transcriptional repressor CTCF
分子名称: Transcriptional repressor CTCF, ZINC ION
著者Sato, M, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the C2H2 type zinc finger domain of human Transcriptional repressor CTCF
To be Published
2DN9
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Solution structure of J-domain from the DnaJ homolog, human Tid1 protein
分子名称: DnaJ homolog subfamily A member 3
著者Kobayashi, N, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-25
公開日2006-10-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of J-domain from the DnaJ homolog, human Tid1 protein
To be Published
1X6G
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Solution structures of the SH3 domain of human megakaryocyte-associated tyrosine-protein kinase.
分子名称: Megakaryocyte-associated tyrosine-protein kinase
著者Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the SH3 domain of human megakaryocyte-associated tyrosine-protein kinase.
To be Published
1K6G
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Solution Structure of Conserved AGNN Tetraloops: Insights into Rnt1p RNA Processing
分子名称: RNA (5'-R(P*GP*GP*CP*GP*UP*CP*AP*UP*GP*AP*GP*UP*CP*CP*AP*UP*GP*GP*CP*GP*CP*C)-3')
著者Lebars, I, Lamontagne, B, Yoshizawa, S, Abou Elela, S, Fourmy, D.
登録日2001-10-16
公開日2001-12-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of conserved AGNN tetraloops: insights into Rnt1p RNA processing.
EMBO J., 20, 2001
1X68
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Solution structures of the C-terminal LIM domain of human FHL5 protein
分子名称: FHL5 protein, ZINC ION
著者Nameki, N, Sasagawa, A, Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the C-terminal LIM domain of human FHL5 protein
To be Published
1X6F
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Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 462
分子名称: ZINC ION, Zinc finger protein 462
著者Sato, M, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 462
To be Published
1X6D
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Solution structures of the PDZ domain of human Interleukin-16
分子名称: Interleukin-16
著者Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the PDZ domain of human Interleukin-16
To be Published
5Y98
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Crystal structure of native unbound peptidyl tRNA hydrolase from Acinetobacter baumannii at 1.36 A resolution
分子名称: GLYCEROL, Peptidyl-tRNA hydrolase
著者Iqbal, N, Singh, N, Kaushik, S, Singh, P.K, Sharma, S, Singh, T.P.
登録日2017-08-23
公開日2017-09-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Search of multiple hot spots on the surface of peptidyl-tRNA hydrolase: structural, binding and antibacterial studies.
Biochem. J., 475, 2018
1X6C
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Solution structures of the SH2 domain of human protein-tyrosine phosphatase SHP-1
分子名称: Tyrosine-protein phosphatase, non-receptor type 6
著者Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the SH2 domain of human protein-tyrosine phosphatase SHP-1
To be Published
1X6A
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Solution structures of the second LIM domain of human LIM-kinase 2 (LIMK2)
分子名称: LIM domain kinase 2, ZINC ION
著者Nameki, N, Sasagawa, A, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the second LIM domain of human LIM-kinase 2 (LIMK2)
To be Published
1X6E
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Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
分子名称: ZINC ION, Zinc finger protein 24
著者Sato, M, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
To be Published
3WSG
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BU of 3wsg by Molmil
Reduced HcgD from Methanocaldococcus jannaschii with citrate
分子名称: CITRIC ACID, FE (II) ION, Putative GTP cyclohydrolase 1 type 2
著者Fujishiro, T, Ermler, U, Shima, S.
登録日2014-03-13
公開日2014-08-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献A possible iron delivery function of the dinuclear iron center of HcgD in [Fe]-hydrogenase cofactor biosynthesis
Febs Lett., 588, 2014
5YCQ
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Unique Specificity-Enhancing Factor for the AAA+ Lon Protease
分子名称: Heat shock protein HspQ
著者Abe, Y, Shioi, S, Kita, S, Nakata, H, Maenaka, K, Kohda, D, Katayama, T, Ueda, T.
登録日2017-09-08
公開日2018-04-11
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献X-ray crystal structure of Escherichia coli HspQ, a protein involved in the retardation of replication initiation
FEBS Lett., 591, 2017
3WV7
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HcgE from Methanothermobacter marburgensis
分子名称: ADENOSINE-5'-DIPHOSPHATE, Hmd co-occurring protein HcgE
著者Fujishiro, T, Ermler, U, Shima, S.
登録日2014-05-16
公開日2015-04-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Protein-pyridinol thioester precursor for biosynthesis of the organometallic acyl-iron ligand in [Fe]-hydrogenase cofactor
Nat Commun, 6, 2015
3WFB
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Reduced cytochrome c-dependent nitric oxide reductase (cNOR) from Pseudomonas aeruginosa in complex with antibody fragment
分子名称: CALCIUM ION, CHLORIDE ION, FE (III) ION, ...
著者Sato, N, Ishii, S, Hino, T, Sugimoto, H, Fukumori, Y, Shiro, Y, Tosha, T.
登録日2013-07-18
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structures of reduced and ligand-bound nitric oxide reductase provide insights into functional differences in respiratory enzymes.
Proteins, 82, 2014
1X69
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Solution structures of the SH3 domain of human Src substrate cortactin
分子名称: cortactin isoform a
著者Sato, M, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the SH3 domain of human Src substrate cortactin
To be Published
3WII
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Crystal structure of the Fab fragment of B2212A, a murine monoclonal antibody specific for the third fibronectin domain (Fn3) of human ROBO1.
分子名称: anti-human ROBO1 antibody B2212A Fab heavy chain, anti-human ROBO1 antibody B2212A Fab light chain
著者Nakayama, T, Mizohata, E, Yamashita, T, Nagatoishi, S, Nakakido, M, Iwanari, H, Mochizuki, Y, Kado, Y, Yokota, Y, Sato, R, Tsumoto, K, Fujitani, H, Kodama, T, Hamakubo, T, Inoue, T.
登録日2013-09-12
公開日2015-01-21
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural features of interfacial tyrosine residue in ROBO1 fibronectin domain-antibody complex: Crystallographic, thermodynamic, and molecular dynamic analyses
Protein Sci., 24, 2015
3WB1
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HcgB from Methanocaldococcus jannaschii
分子名称: SULFATE ION, Uncharacterized protein MJ0488
著者Tamura, H, Fujishiro, T, Ermler, U, Shima, S.
登録日2013-05-11
公開日2014-02-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of the HcgB enzyme in [Fe]-hydrogenase-cofactor biosynthesis.
Angew.Chem.Int.Ed.Engl., 52, 2013
3WSD
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Oxidized HcgD from Methanocaldococcus jannaschii
分子名称: CHLORIDE ION, FE (III) ION, Putative GTP cyclohydrolase 1 type 2
著者Fujishiro, T, Ermler, U, Shima, S.
登録日2014-03-13
公開日2014-08-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A possible iron delivery function of the dinuclear iron center of HcgD in [Fe]-hydrogenase cofactor biosynthesis
Febs Lett., 588, 2014
3WV9
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Guanylylpyridinol (GP)- and ATP-bound HcgE from Methanothermobacter marburgensis
分子名称: 5'-O-[(S)-{[2-(carboxymethyl)-6-hydroxy-3,5-dimethylpyridin-4-yl]oxy}(hydroxy)phosphoryl]guanosine, ADENOSINE-5'-TRIPHOSPHATE, Hmd co-occurring protein HcgE, ...
著者Fujishiro, T, Ermler, U, Shima, S.
登録日2014-05-16
公開日2015-04-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Protein-pyridinol thioester precursor for biosynthesis of the organometallic acyl-iron ligand in [Fe]-hydrogenase cofactor
Nat Commun, 6, 2015
3WV8
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ATP-bound HcgE from Methanothermobacter marburgensis
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Hmd co-occurring protein HcgE, SULFATE ION
著者Fujishiro, T, Ermler, U, Shima, S.
登録日2014-05-16
公開日2015-04-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Protein-pyridinol thioester precursor for biosynthesis of the organometallic acyl-iron ligand in [Fe]-hydrogenase cofactor
Nat Commun, 6, 2015
3WSE
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BU of 3wse by Molmil
Reduced HcgD from Methanocaldococcus jannaschii
分子名称: FE (II) ION, PHOSPHATE ION, Putative GTP cyclohydrolase 1 type 2
著者Fujishiro, T, Ermler, U, Shima, S.
登録日2014-03-13
公開日2014-08-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A possible iron delivery function of the dinuclear iron center of HcgD in [Fe]-hydrogenase cofactor biosynthesis
Febs Lett., 588, 2014
3WB2
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HcgB from Methanocaldococcus jannaschii in complex with the guanylyl-pyridinol product in a model reaction of [Fe]-hydrogenase cofactor biosynthesis
分子名称: 5'-O-[(R)-[(3,6-dimethyl-2-oxo-1,2-dihydropyridin-4-yl)oxy](hydroxy)phosphoryl]guanosine, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Fujishiro, T, Ermler, U, Shima, S.
登録日2013-05-11
公開日2014-02-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Identification of the HcgB enzyme in [Fe]-hydrogenase-cofactor biosynthesis.
Angew.Chem.Int.Ed.Engl., 52, 2013

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件を2024-07-10に公開中

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