Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 605 results

2OVF
DownloadVisualize
BU of 2ovf by Molmil
Crystal Structure of StaL-PAP complex
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, StaL
Authors:Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2007-02-13
Release date:2007-02-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of StaL, a glycopeptide antibiotic sulfotransferase from Streptomyces toyocaensis.
J.Biol.Chem., 282, 2007
7KEZ
DownloadVisualize
BU of 7kez by Molmil
Crystal structure of bH1 Fab variant (CDR H3 loop design 16_0325) in complex with VEGF
Descriptor: CHLORIDE ION, Isoform L-VEGF206 of Vascular endothelial growth factor A, anti-VEGF-A Fab bH1 heavy chain, ...
Authors:Shi, R, Manenda, M.S, Picard, M.-E.
Deposit date:2020-10-13
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of bH1 Fab CDR H3 loop variants in apo form and in complex with VEGF
to be published
7KF0
DownloadVisualize
BU of 7kf0 by Molmil
Crystal structure of bH1 Fab variant (CDR H3 loop design 13_0346) in complex with VEGF
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Isoform L-VEGF206 of Vascular endothelial growth factor A, ...
Authors:Shi, R, Picard, M.-E.
Deposit date:2020-10-13
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structure of bH1 Fab CDR H3 loop variants in apo form and in complex with VEGF
to be published
7KF1
DownloadVisualize
BU of 7kf1 by Molmil
Crystal structure of bH1 Fab variant (CDR H3 loop design 14_0130) in complex with VEGF
Descriptor: CHLORIDE ION, Isoform L-VEGF206 of Vascular endothelial growth factor A, anti-VEGF-A Fab bH1 heavy chain, ...
Authors:Shi, R, Picard, M.-E, Manenda, M.S.
Deposit date:2020-10-13
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of bH1 Fab CDR H3 loop variants in apo form and in complex with VEGF
to be published
1QYV
DownloadVisualize
BU of 1qyv by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with NADP
Descriptor: Estradiol 17 beta-dehydrogenase 1, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Shi, R, Lin, S.X.
Deposit date:2003-09-12
Release date:2004-08-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
1QYW
DownloadVisualize
BU of 1qyw by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with androstanedione and NADP
Descriptor: 5ALPHA-ANDROSTAN-3,17-DIONE, Estradiol 17 beta-dehydrogenase 1, GLYCEROL, ...
Authors:Shi, R, Lin, S.X.
Deposit date:2003-09-12
Release date:2004-08-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
1QYX
DownloadVisualize
BU of 1qyx by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with androstenedione and NADP
Descriptor: 4-ANDROSTENE-3-17-DIONE, Estradiol 17 beta-dehydrogenase 1, GLYCEROL, ...
Authors:Shi, R, Lin, S.X.
Deposit date:2003-09-12
Release date:2004-08-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
3UOY
DownloadVisualize
BU of 3uoy by Molmil
Crystal Structure of OTEMO complex with FAD and NADP (form 1)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, OTEMO, ...
Authors:Shi, R, Matte, A, Cygler, M, Lau, P.
Deposit date:2011-11-17
Release date:2012-02-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cloning, Baeyer-Villiger biooxidations, and structures of the camphor pathway 2-oxo-{Delta}(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A monooxygenase of Pseudomonas putida ATCC 17453.
Appl.Environ.Microbiol., 78, 2012
3UOV
DownloadVisualize
BU of 3uov by Molmil
Crystal Structure of OTEMO (FAD bound form 1)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, OTEMO
Authors:Shi, R, Matte, A, Cygler, M, Lau, P.
Deposit date:2011-11-17
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.045 Å)
Cite:Cloning, Baeyer-Villiger biooxidations, and structures of the camphor pathway 2-oxo-{Delta}(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A monooxygenase of Pseudomonas putida ATCC 17453.
Appl.Environ.Microbiol., 78, 2012
3UP5
DownloadVisualize
BU of 3up5 by Molmil
Crystal Structure of OTEMO complex with FAD and NADP (form 4)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, OTEMO
Authors:Shi, R, Matte, A, Cygler, M, Lau, P.
Deposit date:2011-11-17
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.453 Å)
Cite:Cloning, Baeyer-Villiger biooxidations, and structures of the camphor pathway 2-oxo-{Delta}(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A monooxygenase of Pseudomonas putida ATCC 17453.
Appl.Environ.Microbiol., 78, 2012
3UP4
DownloadVisualize
BU of 3up4 by Molmil
Crystal Structure of OTEMO complex with FAD and NADP (form 3)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, OTEMO
Authors:Shi, R, Matte, A, Cygler, M, Lau, P.
Deposit date:2011-11-17
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Cloning, Baeyer-Villiger biooxidations, and structures of the camphor pathway 2-oxo-{Delta}(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A monooxygenase of Pseudomonas putida ATCC 17453.
Appl.Environ.Microbiol., 78, 2012
3UCS
DownloadVisualize
BU of 3ucs by Molmil
Crystal structure of the complex between CBPA J-domain and CBPM
Descriptor: Chaperone-modulator protein CbpM, Curved DNA-binding protein
Authors:Shi, R, Sarraf, N.S, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2011-10-27
Release date:2013-07-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structure of the complex between CbpA J-domain and CbpM provides a link between chaperone and transcription regulation in bacterial heat shock response
to be published
3UOZ
DownloadVisualize
BU of 3uoz by Molmil
Crystal Structure of OTEMO complex with FAD and NADP (form 2)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, OTEMO
Authors:Shi, R, Matte, A, Cygler, M, Lau, P.
Deposit date:2011-11-17
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.407 Å)
Cite:Cloning, Baeyer-Villiger biooxidations, and structures of the camphor pathway 2-oxo-{Delta}(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A monooxygenase of Pseudomonas putida ATCC 17453.
Appl.Environ.Microbiol., 78, 2012
3UOX
DownloadVisualize
BU of 3uox by Molmil
Crystal Structure of OTEMO (FAD bound form 2)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, OTEMO
Authors:Shi, R, Matte, A, Cygler, M, Lau, P.
Deposit date:2011-11-17
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.956 Å)
Cite:Cloning, Baeyer-Villiger biooxidations, and structures of the camphor pathway 2-oxo-{Delta}(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A monooxygenase of Pseudomonas putida ATCC 17453.
Appl.Environ.Microbiol., 78, 2012
8ZLY
DownloadVisualize
BU of 8zly by Molmil
Crystal structure of Streptococcus pneumoniae pyruvate kinase in complex with oxalate and fructose 1,6-bisphosphate and UDP
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, OXALATE ION, ...
Authors:Nakashima, R, Taguchi, A.
Deposit date:2024-05-21
Release date:2024-07-31
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural Basis of Nucleotide Selectivity in Pyruvate Kinase.
J.Mol.Biol., 436, 2024
6ZBT
DownloadVisualize
BU of 6zbt by Molmil
Structure of 14-3-3 gamma in complex with Nedd4-2 14-3-3 binding motif Ser342
Descriptor: 1,1,1,3,3,3-hexafluoropropan-2-ol, 14-3-3 protein gamma, E3 ubiquitin-protein ligase NEDD4-like
Authors:Joshi, R, Kalabova, D, Obsil, T, Obsilova, V.
Deposit date:2020-06-09
Release date:2021-07-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.79948521 Å)
Cite:14-3-3-protein regulates Nedd4-2 by modulating interactions between HECT and WW domains.
Commun Biol, 4, 2021
5B83
DownloadVisualize
BU of 5b83 by Molmil
Crystal structure of Optineurin UBAN in complex with linear ubiquitin
Descriptor: Optineurin, tetra ubiquitin
Authors:Ishii, R, Nureki, O.
Deposit date:2016-06-12
Release date:2016-09-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.694 Å)
Cite:Linear ubiquitination is involved in the pathogenesis of optineurin-associated amyotrophic lateral sclerosis
Nat Commun, 7, 2016
8IC7
DownloadVisualize
BU of 8ic7 by Molmil
exo-beta-D-arabinofuranosidase ExoMA2 from Microbacterium arabinogalactanolyticum in complex with beta-D-arabinofuranose
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Fukushima, R, Kashima, T, Ishiwata, A, Fujita, K, Fushinobu, S.
Deposit date:2023-02-11
Release date:2023-08-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Identification and characterization of endo-alpha-, exo-alpha-, and exo-beta-D-arabinofuranosidases degrading lipoarabinomannan and arabinogalactan of mycobacteria.
Nat Commun, 14, 2023
8IC6
DownloadVisualize
BU of 8ic6 by Molmil
exo-beta-D-arabinanase ExoMA2 from Microbacterium arabinogalactanolyticum in complex with Tris
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Fukushima, R, Kashima, T, Ishiwata, A, Fujita, K, Fushinobu, S.
Deposit date:2023-02-10
Release date:2023-08-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Identification and characterization of endo-alpha-, exo-alpha-, and exo-beta-D-arabinofuranosidases degrading lipoarabinomannan and arabinogalactan of mycobacteria.
Nat Commun, 14, 2023
5I20
DownloadVisualize
BU of 5i20 by Molmil
Crystal structure of protein
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, SULFATE ION, Uncharacterized protein
Authors:Ishitani, R, Nureki, O.
Deposit date:2016-02-08
Release date:2016-06-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for amino acid export by DMT superfamily transporter YddG.
Nature, 534, 2016
8WM2
DownloadVisualize
BU of 8wm2 by Molmil
Crystal structure of AbmM
Descriptor: Fe-S radical SAM, IRON/SULFUR CLUSTER, SULFATE ION
Authors:Ushimaru, R, Mori, T, Abe, I, Liu, H.-w.
Deposit date:2023-10-02
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of AbmM
To Be Published
7XSG
DownloadVisualize
BU of 7xsg by Molmil
Crystal structure of ClAgl29B
Descriptor: Alpha-L-fucosidase, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Shishiuchi, R, Kang, H, Tagami, T, Okuyama, M.
Deposit date:2022-05-14
Release date:2023-01-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.609 Å)
Cite:Discovery of alpha-l-Glucosidase Raises the Possibility of alpha-l-Glucosides in Nature.
Acs Omega, 7, 2022
7XSF
DownloadVisualize
BU of 7xsf by Molmil
Crystal structure of ClAgl29A
Descriptor: Alpha-L-fucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Shishiuchi, R, Kang, H, Tagami, T, Okuyama, M.
Deposit date:2022-05-14
Release date:2023-01-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Discovery of alpha-l-Glucosidase Raises the Possibility of alpha-l-Glucosides in Nature.
Acs Omega, 7, 2022
7XSH
DownloadVisualize
BU of 7xsh by Molmil
Crystal structure of ClAgl29B bound with L-glucose
Descriptor: Alpha-L-fucosidase, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Shishiuchi, R, Kang, H, Tagami, T, Okuyama, M.
Deposit date:2022-05-14
Release date:2023-01-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.708 Å)
Cite:Discovery of alpha-l-Glucosidase Raises the Possibility of alpha-l-Glucosides in Nature.
Acs Omega, 7, 2022
8JQP
DownloadVisualize
BU of 8jqp by Molmil
Protocatecuate hydroxylase from Xylophilus ampelinus complexed with 3,4-dihydroxybenzoate
Descriptor: 3,4-DIHYDROXYBENZOIC ACID, 4-hydroxybenzoate 3-monooxygenase (NAD(P)H), CALCIUM ION, ...
Authors:Fukushima, R, Katsuki, N, Fushinobu, S, Takaya, N.
Deposit date:2023-06-14
Release date:2023-12-06
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Protocatechuate hydroxylase is a novel group A flavoprotein monooxygenase with a unique substrate recognition mechanism.
J.Biol.Chem., 300, 2023

225946

數據於2024-10-09公開中

PDB statisticsPDBj update infoContact PDBjnumon