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PDB: 2537 件

1J0S
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Solution structure of the human interleukin-18
分子名称: Interleukin-18
著者Kato, Z, Jee, J, Shikano, H, Mishima, M, Ohki, I, Yoneda, T, Hara, T, Torigoe, K, Kondo, N, Shirakawa, M.
登録日2002-11-21
公開日2003-11-11
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献The structure and binding mode of interleukin-18
Nat.Struct.Biol., 10, 2003
1WG8
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BU of 1wg8 by Molmil
Crystal structure of a predicted S-adenosylmethionine-dependent methyltransferase TT1512 from Thermus thermophilus HB8.
分子名称: S-ADENOSYLMETHIONINE, predicted S-adenosylmethionine-dependent methyltransferase
著者Kishishita, S, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-27
公開日2004-11-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a predicted S-adenosylmethionine-dependent methyltransferase TT1512 from Thermus thermophilus HB8 at 2.0 Ang. resolution.
To be Published
3VMZ
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Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel (oxidation/H2O2)
分子名称: Voltage-gated hydrogen channel 1
著者Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
登録日2011-12-19
公開日2013-01-30
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Oxidation/H2O2)
To be Published
5C68
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Crystal structure of C-As lyase at 1.46 Angstroms resolution
分子名称: Glyoxalase/bleomycin resistance protein/dioxygenase, NICKEL (II) ION, SODIUM ION
著者Venkadesh, S, Yoshinaga, M, Kandavelu, P, Rosen, B.P.
登録日2015-06-22
公開日2016-07-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.4618 Å)
主引用文献Crystal structure of C-As lyase at 1.46 Angstroms resolution
To Be Published
3L10
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Structure of split monoubiquitinated PCNA with ubiquitin in position one
分子名称: Monoubiquitinated Proliferating cell nuclear antigen, Proliferating cell nuclear antigen
著者Freudenthal, B.D, Gakhar, L, Ramaswamy, S, Washington, M.T.
登録日2009-12-10
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of monoubiquitinated PCNA and implications for translesion synthesis and DNA polymerase exchange.
Nat.Struct.Mol.Biol., 17, 2010
1WI1
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BU of 1wi1 by Molmil
Solution structure of the PH domain of human calcium-dependent activator protein for secretion (CAPS)
分子名称: calcium-dependent activator protein for secretion, CAPS
著者Yoneyama, M, Izumi, K, Yoshida, M, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the PH domain of human calcium-dependent activator protein for secretion (CAPS)
To be Published
1WJX
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BU of 1wjx by Molmil
Crystal sturucture of TT0801 from Thermus thermophilus
分子名称: POTASSIUM ION, SsrA-binding protein
著者Bessho, Y, Shibata, R, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-29
公開日2004-11-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for functional mimicry of long-variable-arm tRNA by transfer-messenger RNA.
Proc.Natl.Acad.Sci.Usa, 104, 2007
7DKC
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BU of 7dkc by Molmil
Stenotrophomonas maltophilia DPP7 in complex with Tyr-Tyr
分子名称: Dipeptidyl-peptidase, GLYCEROL, TYROSINE
著者Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2020-11-23
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7.
Sci Rep, 11, 2021
1WK4
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BU of 1wk4 by Molmil
Crystal structure of ttk003001606
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ttk003001606
著者Kaminishi, T, Sakai, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-30
公開日2004-11-30
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of ttk003001606
To be Published
3E5Z
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BU of 3e5z by Molmil
X-Ray structure of the putative gluconolactonase in protein family PF08450. Northeast Structural Genomics Consortium target DrR130.
分子名称: MAGNESIUM ION, putative Gluconolactonase
著者Kuzin, A.P, Abashidze, M, Seetharaman, J, Wang, D, Mao, L, Maglaqui, M, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Tong, S.N, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-08-14
公開日2008-09-30
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献X-Ray structure of the putative gluconolactonase in protein family PF08450. Northeast Structural Genomics Consortium target DrR130.
To be Published
5C4P
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BU of 5c4p by Molmil
Crystal structure of ArsI C-As lyase solved by Ni-SAD phasing
分子名称: Glyoxalase/bleomycin resistance protein/dioxygenase, NICKEL (II) ION
著者Venkadesh, S, Yoshinaga, M, Kandavelu, P, Rosen, B.P.
登録日2015-06-18
公開日2016-07-13
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal structure of ArsI C-As lyase from Thermomonospora curvata
To Be Published
5C6X
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Crystal structure of C-As lyase with Co(II)
分子名称: COBALT (II) ION, GLYCEROL, Glyoxalase/bleomycin resistance protein/dioxygenase, ...
著者Venkadesh, S, Yoshinaga, M, Sankaran, B, Kandavelu, P, Rosen, B.P.
登録日2015-06-23
公開日2016-07-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of C-As lyase with Co(II)
To Be Published
5GUE
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BU of 5gue by Molmil
Crystal structure of CotB2 (GGSPP/Mg2+-Bound Form) from Streptomyces melanosporofaciens
分子名称: Cyclooctat-9-en-7-ol synthase, MAGNESIUM ION, phosphonooxy-[(10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenyl]sulfanyl-phosphinic acid
著者Tomita, T, Kim, S.-Y, Ozaki, T, Yoshida, A, Kuzuyama, T, Nishiyama, M.
登録日2016-08-28
公開日2017-06-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Insights into the CotB2-Catalyzed Cyclization of Geranylgeranyl Diphosphate to the Diterpene Cyclooctat-9-en-7-ol
ACS Chem. Biol., 12, 2017
5CB9
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Crystal structure of C-As lyase with mercaptoethonal
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Glyoxalase/bleomycin resistance protein/dioxygenase, ...
著者Venkadesh, S, Yoshinaga, M, Sankaran, B, Kandavelu, P, Rosen, B.P.
登録日2015-06-30
公開日2016-07-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of C-As lyase with mercaptoethonal
To Be Published
1WUB
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BU of 1wub by Molmil
Crystal structure of the polyisoprenoid-binding protein, TT1927b, from Thermus thermophilus HB8
分子名称: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, conserved hypothetical protein TT1927b
著者Handa, N, Idaka, M, Terada, T, Hamana, H, Ishizuka, Y, Park, S.-Y, Tame, J.R.H, Doi-Katayama, Y, Hirota, H, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-03
公開日2004-12-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of a novel polyisoprenoid-binding protein from Thermus thermophilus HB8
Protein Sci., 14, 2005
6JMR
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BU of 6jmr by Molmil
CD98hc extracellular domain bound to HBJ127 Fab and MEM-108 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4F2 cell-surface antigen heavy chain, ...
著者Lee, Y, Nishizawa, T, Kusakizako, T, Oda, K, Ishitani, R, Yokoyama, T, Nakane, T, Shirouzu, M, Nureki, O.
登録日2019-03-13
公開日2019-06-19
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Cryo-EM structure of the human L-type amino acid transporter 1 in complex with glycoprotein CD98hc.
Nat.Struct.Mol.Biol., 26, 2019
3VMY
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Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel (REDUCTION/DTT)
分子名称: Voltage-gated hydrogen channel 1
著者Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
登録日2011-12-19
公開日2013-01-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Reduction/Dtt)
To be Published
4KMI
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BU of 4kmi by Molmil
Crystal structure of 4-O-beta-D-mannosyl-D-glucose phosphorylase MGP complexed with PO4
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-O-beta-D-mannosyl-D-glucose phosphorylase, PHOSPHATE ION
著者Nakae, S, Ito, S, Higa, M, Senoura, T, Wasaki, J, Hijikata, A, Shionyu, M, Ito, S, Shirai, T.
登録日2013-05-08
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of Novel Enzyme in Mannan Biodegradation Process 4-O-beta-d-Mannosyl-d-Glucose Phosphorylase MGP
J.Mol.Biol., 425, 2013
5DRH
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BU of 5drh by Molmil
Crystal structure of apo C-As lyase
分子名称: Glyoxalase/bleomycin resistance protein/dioxygenase, SODIUM ION
著者Venkadesh, S, Yoshinaga, M, Sankaran, B, Kandavelu, P, Rosen, B.P.
登録日2015-09-15
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structure of apo C-As lyase
To Be Published
3CGW
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BU of 3cgw by Molmil
Crystal structure of 2-phospho-(S)-lactate transferase from Methanosarcina mazei. Northeast Structural Genomics Consortium target MaR46
分子名称: LPPG:FO 2-phospho-L-lactate transferase
著者Forouhar, F, Abashidze, M, Seetharaman, J, Vorobiev, S.M, Ciao, M, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2008-03-06
公開日2008-03-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Molecular insights into the biosynthesis of the f420 coenzyme.
J.Biol.Chem., 283, 2008
3VMX
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Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel
分子名称: Voltage-gated hydrogen channel 1
著者Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
登録日2011-12-19
公開日2012-05-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The cytoplasmic coiled-coil mediates cooperative gating temperature sensitivity in the voltage-gated H(+) channel Hv1
Nat Commun, 3, 2012
7W79
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Heme exporter HrtBA in complex with Mn-AMPPNP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, Putative ABC transport system integral membrane protein, ...
著者Hisano, T, Nakamura, H, Rahman, M.M, Tosha, T, Shirouzu, M, Shiro, Y.
登録日2021-12-04
公開日2022-06-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for heme detoxification by an ATP-binding cassette-type efflux pump in gram-positive pathogenic bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
3CQ9
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Crystal structure of the lp_1622 protein from Lactobacillus plantarum. Northeast Structural Genomics Consortium target LpR114
分子名称: SULFATE ION, Uncharacterized protein lp_1622
著者Vorobiev, S.M, Abashidze, M, Seetharaman, J, Zhao, L, Maglaqui, M, Foote, E.L, Ciccosanti, C, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2008-04-02
公開日2008-04-15
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the lp_1622 protein from Lactobacillus plantarum.
To be Published
7W78
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Heme exporter HrtBA in complex with Mg-AMPPNP
分子名称: ACETATE ION, DODECANE, GLYCEROL, ...
著者Hisano, T, Nakamura, H, Rahman, M.M, Tosha, T, Shirouzu, M, Shiro, Y.
登録日2021-12-04
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.884 Å)
主引用文献Structural basis for heme detoxification by an ATP-binding cassette-type efflux pump in gram-positive pathogenic bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
5DFG
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BU of 5dfg by Molmil
Crystal structure of C-As lyase with mutations Y100H and V102F
分子名称: Glyoxalase/bleomycin resistance protein/dioxygenase
著者Venkadesh, S, Yoshinaga, M, Kandavelu, P, Sankaran, B, Rosen, B.P.
登録日2015-08-26
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9711 Å)
主引用文献Crystal structure of C-As lyase with mutations Y100H and F102V
To Be Published

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