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PDB: 1022 件

8IYT
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Crystal Structure of Serine Palmitoyltransferase complexed with D-methylserine
分子名称: (2~{R})-2-methyl-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-3-oxidanyl-propanoic acid, 1,2-ETHANEDIOL, Serine palmitoyltransferase
著者Takahashi, A, Murakami, T, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2023-04-06
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of Serine Palmitoyltransferase from Sphingobacterium multivorum
To Be Published
8IYP
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Crystal structure of serine palmitoyltransferase soaked in 190 mM D-serine solution
分子名称: 1,2-ETHANEDIOL, Serine palmitoyltransferase, [3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE
著者Takahashi, A, Murakami, T, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2023-04-05
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.651 Å)
主引用文献Crystal structure of Serine Palmitoyltransferase from Sphingobacterium multivorum
To Be Published
5H1R
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BU of 5h1r by Molmil
C. elegans INX-6 gap junction channel
分子名称: Innexin-6
著者Oshima, A, Tani, K, Fujiyoshi, Y.
登録日2016-10-11
公開日2016-12-07
最終更新日2017-02-01
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Atomic structure of the innexin-6 gap junction channel determined by cryo-EM
Nat Commun, 7, 2016
4H4S
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BU of 4h4s by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175C/Q177G mutant (reduced form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
5H1Q
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BU of 5h1q by Molmil
C. elegans INX-6 gap junction hemichannel
分子名称: Innexin-6
著者Oshima, A, Tani, K, Fujiyoshi, Y.
登録日2016-10-11
公開日2016-12-07
最終更新日2017-02-15
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Atomic structure of the innexin-6 gap junction channel determined by cryo-EM
Nat Commun, 7, 2016
3WLB
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BU of 3wlb by Molmil
HLA-A24 in complex with HIV-1 Nef126-10(8T10F)
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-24 alpha chain, ...
著者Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A, Han, C.
登録日2013-11-08
公開日2014-06-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Switching and emergence of CTL epitopes in HIV-1 infection
Retrovirology, 11, 2014
3WL9
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BU of 3wl9 by Molmil
HLA-A24 in complex with HIV-1 Nef126-10(8I10F)
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-24 alpha chain, ...
著者Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A, Han, C.
登録日2013-11-08
公開日2014-06-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Switching and emergence of CTL epitopes in HIV-1 infection
Retrovirology, 11, 2014
5DBH
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BU of 5dbh by Molmil
Crystal structure of O-acetylserine sulfhydrylase from haemophilus influenzae in complex with reaction intermediate alpha-aminoacrylate
分子名称: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, Cysteine synthase, GLYCEROL
著者Kaushik, A, Ekka, M.K, Singh, A.K, Kumaran, S.
登録日2015-08-21
公開日2015-09-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal structure of O-acetylserine sulfhydrylase from haemophilus influenzae in complex with reaction intermediate alpha-aminoacrylate
To Be Published
2RT3
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BU of 2rt3 by Molmil
Solution structure of the second RRM domain of Nrd1
分子名称: Negative regulator of differentiation 1
著者Kobayashi, A, Kanaba, T, Mishima, M.
登録日2013-04-16
公開日2014-04-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of the second RRM domain of Nrd1, a fission yeast MAPK target RNA binding protein, and implication for its RNA recognition and regulation
Biochem.Biophys.Res.Commun., 437, 2013
3FLM
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BU of 3flm by Molmil
Crystal structure of menD from E.coli
分子名称: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
著者Priyadarshi, A, Hwang, K.Y.
登録日2008-12-19
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insights of the MenD from Escherichia coli reveal ThDP affinity.
Biochem.Biophys.Res.Commun., 380, 2009
3GR6
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BU of 3gr6 by Molmil
Crystal structure of the staphylococcus aureus enoyl-acyl carrier protein reductase (fabI) in complex with NADP and triclosan
分子名称: Enoyl-[acyl-carrier-protein] reductase [NADH], NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRICLOSAN
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-03-25
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural insights into Staphylococcus aureus enoyl-ACP reductase (FabI), in complex with NADP and triclosan.
Proteins, 78, 2010
3HWW
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BU of 3hww by Molmil
Crystal structure of menaquinone synthesis protein MenD from E. coli in complex with oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, CHLORIDE ION, ...
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-06-19
公開日2009-11-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and functional analysis of Vitamin K2 synthesis protein MenD.
Biochem.Biophys.Res.Commun., 388, 2009
5EW9
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BU of 5ew9 by Molmil
Crystal Structure of Aurora A Kinase Domain Bound to MK-5108
分子名称: 4-(3-chloranyl-2-fluoranyl-phenoxy)-1-[[6-(1,3-thiazol-2-ylamino)pyridin-2-yl]methyl]cyclohexane-1-carboxylic acid, Aurora kinase A
著者Shiau, A.K, Motamedi, A.
登録日2015-11-20
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.181 Å)
主引用文献A Cell Biologist's Field Guide to Aurora Kinase Inhibitors.
Front Oncol, 5, 2015
8WAF
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BU of 8waf by Molmil
Crystal structure of the C-terminal fragment (residues 756-982 with the C864S mutation) of Arabidopsis thaliana CHUP1
分子名称: Protein CHUP1, chloroplastic
著者Shimada, A, Takano, A, Nakamura, Y, Kohda, D.
登録日2023-09-07
公開日2024-01-17
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献CHLOROPLAST UNUSUAL POSITIONING 1 is a plant-specific actin polymerization factor regulating chloroplast movement.
Plant Cell, 36, 2024
8WAG
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BU of 8wag by Molmil
Crystal structure of the C-terminal fragment (residues 716-982) of Arabidopsis thaliana CHUP1
分子名称: Protein CHUP1, chloroplastic
著者Shimada, A, Nakamura, Y, Takano, A, Kohda, D.
登録日2023-09-07
公開日2024-01-17
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献CHLOROPLAST UNUSUAL POSITIONING 1 is a plant-specific actin polymerization factor regulating chloroplast movement.
Plant Cell, 36, 2024
2IJO
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BU of 2ijo by Molmil
Crystal Structure of the West Nile virus NS2B-NS3 protease complexed with bovine pancreatic trypsin inhibitor
分子名称: Pancreatic trypsin inhibitor, Polyprotein
著者Aleshin, A.E, Shiryaev, S.A, Strongin, A.Y, Liddington, R.C.
登録日2006-09-29
公開日2007-05-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural evidence for regulation and specificity of flaviviral proteases and evolution of the Flaviviridae fold.
Protein Sci., 16, 2007
5NSJ
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BU of 5nsj by Molmil
GP1 receptor-binding domain from Whitewater Arroyo mammarenavirus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Pre-glycoprotein polyprotein GP complex, ...
著者Shimon, A, Shani, O, Diskin, R.
登録日2017-04-26
公開日2017-08-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.249 Å)
主引用文献Structural Basis for Receptor Selectivity by the Whitewater Arroyo Mammarenavirus.
J. Mol. Biol., 429, 2017
3KLR
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BU of 3klr by Molmil
Bovine H-protein at 0.88 angstrom resolution
分子名称: GLYCEROL, Glycine cleavage system H protein, SULFATE ION
著者Higashiura, A, Kurakane, T, Matsuda, M, Suzuki, M, Inaka, K, Sato, M, Tanaka, H, Fujiwara, K, Nakagawa, A.
登録日2009-11-09
公開日2010-06-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (0.88 Å)
主引用文献High-resolution X-ray crystal structure of bovine H-protein at 0.88 A resolution
Acta Crystallogr.,Sect.D, 66, 2010
3GNS
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BU of 3gns by Molmil
Crystal Structure of the Staphylococcus aureus Enoyl-Acyl Carrier Protein Reductase (FabI) in apo form (one molecule in AU)
分子名称: Enoyl-[acyl-carrier-protein] reductase [NADH], SODIUM ION
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-03-18
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.706 Å)
主引用文献Structural insights into Staphylococcus aureus enoyl-ACP reductase (FabI), in complex with NADP and triclosan
Proteins, 78, 2010
5Z85
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BU of 5z85 by Molmil
The structure of azide-bound cytochrome c oxidase determined using the another batch crystals exposed to 20 mM azide solution for 2 days
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Shimada, A, Hatano, K, Tadehara, H, Tsukihara, T.
登録日2018-01-31
公開日2018-08-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献X-ray structural analyses of azide-bound cytochromecoxidases reveal that the H-pathway is critically important for the proton-pumping activity.
J. Biol. Chem., 293, 2018
3HWX
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BU of 3hwx by Molmil
Crystal structure of menaquinone synthesis protein MenD from E. coli in complex with ThDP
分子名称: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, GLYCEROL, MAGNESIUM ION, ...
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-06-19
公開日2009-11-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and functional analysis of Vitamin K2 synthesis protein MenD.
Biochem.Biophys.Res.Commun., 388, 2009
1IPE
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BU of 1ipe by Molmil
TROPINONE REDUCTASE-II COMPLEXED WITH NADPH
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TROPINONE REDUCTASE-II
著者Yamashita, A, Endo, M, Higashi, T, Nakatsu, T, Yamada, Y, Oda, J, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-05-09
公開日2003-06-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Capturing Enzyme Structure Prior to Reaction Initiation: Tropinone Reductase-II-Substrate Complexes
BIOCHEMISTRY, 42, 2003
8HFH
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BU of 8hfh by Molmil
CENP-E motor domain in complex with AMPPNP and Mg2+
分子名称: Centromere-associated protein E, IMIDAZOLE, MAGNESIUM ION, ...
著者Shibuya, A, Yokoyama, H.
登録日2022-11-10
公開日2023-03-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the motor domain of centromere-associated protein E in complex with a non-hydrolysable ATP analogue.
Febs Lett., 597, 2023
3IHC
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BU of 3ihc by Molmil
Crystal structure of mouse Bcl-xl (wt) at pH 5.0
分子名称: Bcl-2-like protein 1
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-07-30
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural insights into mouse anti-apoptotic Bcl-xl reveal affinity for Beclin 1 and gossypol.
Biochem.Biophys.Res.Commun., 394, 2010
3IIG
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BU of 3iig by Molmil
Crystal structure of mouse Bcl-xl mutant (F105A) at pH 5.0
分子名称: Bcl-2-like protein 1
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-08-01
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into mouse anti-apoptotic Bcl-xl reveal affinity for Beclin 1 and gossypol.
Biochem.Biophys.Res.Commun., 394, 2010

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件を2024-07-10に公開中

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