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PDB: 241 results

1YWY
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BU of 1ywy by Molmil
Solution Structure of Pseudomonas aeruginosa Protein PA2021. The Northeast Structural Genomics Consortium Target Pat85.
Descriptor: hypothetical protein PA2021
Authors:Lin, Y.C, Liu, G, Shen, Y, Yee, A, Arrowsmith, C.H, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-02-18
Release date:2005-04-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of Pseudomonas aeruginosa Protein PA2021.
To be Published
3Q5M
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BU of 3q5m by Molmil
Crystal structure of Escherichia coli BamD
Descriptor: IODIDE ION, UPF0169 lipoprotein yfiO
Authors:Dong, C, Hou, H, Yang, X, Dong, Y, Shen, Y.
Deposit date:2010-12-28
Release date:2011-12-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Structure of Escherichia coli BamD and its functional implications in outer membrane protein assembly
Acta Crystallogr.,Sect.D, 68, 2012
2A5J
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BU of 2a5j by Molmil
Crystal Structure of Human RAB2B
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-2B
Authors:Dong, A, Wang, J, Shen, Y, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Bochkarev, A, Park, H.W, Structural Genomics Consortium (SGC)
Deposit date:2005-06-30
Release date:2005-07-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Crystal structure of human RAB2B
To be Published
8W6D
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BU of 8w6d by Molmil
CryoEM structure of NaDC1 in apo state
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, CHOLESTEROL HEMISUCCINATE, SODIUM ION, ...
Authors:Chi, X, Chen, Y, Li, Y, Zhang, Y, Shen, Y, Chen, Y, Wang, Z, Yan, R.
Deposit date:2023-08-28
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM structures of the human NaS1 and NaDC1 transporters revealed the elevator transport and allosteric regulation mechanism.
Sci Adv, 10, 2024
8W6O
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BU of 8w6o by Molmil
NaS1 in IN/IN state
Descriptor: CHOLESTEROL, SODIUM ION, Solute carrier family 13 member 1
Authors:Chi, X, Chen, Y, Li, Y, Zhang, Y, Shen, Y, Chen, Y, Wang, Z, Yan, R.
Deposit date:2023-08-29
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of the human NaS1 and NaDC1 transporters revealed the elevator transport and allosteric regulation mechanism.
Sci Adv, 10, 2024
8W6C
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BU of 8w6c by Molmil
CryoEM structure of NaDC1 with Citrate
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, CHOLESTEROL HEMISUCCINATE, CITRIC ACID, ...
Authors:Chi, X, Chen, Y, Li, Y, Dai, L, Zhang, Y, Shen, Y, Chen, Y, Shi, T, Yang, H, Wang, Z, Yan, R.
Deposit date:2023-08-28
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures of the human NaS1 and NaDC1 transporters revealed the elevator transport and allosteric regulation mechanism.
Sci Adv, 10, 2024
8W6G
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BU of 8w6g by Molmil
NaDC1 with inhibitor ACA
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 2-[[(~{E})-3-(4-pentylphenyl)prop-2-enoyl]amino]benzoic acid, CHOLESTEROL HEMISUCCINATE, ...
Authors:Chi, X, Chen, Y, Li, Y, Zhang, Y, Shen, Y, Chen, Y, Wang, Z, Yan, R.
Deposit date:2023-08-28
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of the human NaS1 and NaDC1 transporters revealed the elevator transport and allosteric regulation mechanism.
Sci Adv, 10, 2024
8W6H
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BU of 8w6h by Molmil
NaS1 with sulfate - IN/IN state
Descriptor: CHOLESTEROL, SODIUM ION, SULFATE ION, ...
Authors:Chi, X, Chen, Y, Li, Y, Zhang, Y, Shen, Y, Chen, Y, Wang, Z, Yan, R.
Deposit date:2023-08-28
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of the human NaS1 and NaDC1 transporters revealed the elevator transport and allosteric regulation mechanism.
Sci Adv, 10, 2024
8W6T
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BU of 8w6t by Molmil
NaS1 in IN/OUT state
Descriptor: Solute carrier family 13 member 1
Authors:Chi, X, Chen, Y, Li, Y, Zhang, Y, Shen, Y, Chen, Y, Wang, Z, Yan, R.
Deposit date:2023-08-29
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of the human NaS1 and NaDC1 transporters revealed the elevator transport and allosteric regulation mechanism.
Sci Adv, 10, 2024
8W6N
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BU of 8w6n by Molmil
NaS1 with sulfate in IN/OUT state
Descriptor: SODIUM ION, SULFATE ION, Solute carrier family 13 member 1
Authors:Chi, X, Chen, Y, Li, Y, Zhang, Y, Shen, Y, Chen, Y, Wang, Z, Yan, R.
Deposit date:2023-08-29
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures of the human NaS1 and NaDC1 transporters revealed the elevator transport and allosteric regulation mechanism.
Sci Adv, 10, 2024
6AKI
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BU of 6aki by Molmil
Calcium release-activated calcium channel protein 1, P288L mutant
Descriptor: CHLORIDE ION, Calcium release-activated calcium channel protein 1
Authors:Liu, X, Wu, G, Yang, X, Shen, Y.
Deposit date:2018-09-01
Release date:2019-03-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (4.496 Å)
Cite:Calcium release-activated calcium channel protein 1, P288L mutant
To Be Published
6BEK
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BU of 6bek by Molmil
Structure of sIHF bound to an 8bp palindromic DNA
Descriptor: DNA (5'-D(*CP*AP*TP*GP*CP*AP*TP*G)-3'), POTASSIUM ION, SCO1480
Authors:Guarne, A, Nanji, T.N, Shen, Y.
Deposit date:2017-10-25
Release date:2018-10-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Streptomyces IHF uses multiple interfaces to bind DNA.
Biochim Biophys Acta Gen Subj, 1863, 2019
5F4H
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BU of 5f4h by Molmil
Archael RuvB-like Holiday junction helicase
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Nucleotide binding protein PINc
Authors:Zhai, B, DuPrez, K.T, Doukov, T.I, Shen, Y, Fan, L.
Deposit date:2015-12-03
Release date:2016-12-21
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:Structure and Function of a Novel ATPase that Interacts with Holliday Junction Resolvase Hjc and Promotes Branch Migration.
J. Mol. Biol., 429, 2017
8WWW
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BU of 8www by Molmil
Crystal structure of the adenylation domain of SyAstC
Descriptor: Carrier domain-containing protein, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Li, Z, Zhu, Z, Zhu, D, Shen, Y.
Deposit date:2023-10-27
Release date:2024-06-05
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Functional Application of the Single-Module NRPS-like d-Alanyltransferase in Maytansinol Biosynthesis
Acs Catalysis, 14, 2024
3NWN
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BU of 3nwn by Molmil
Crystal structure of the human KIF9 motor domain in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Kinesin-like protein KIF9, ...
Authors:Zhu, H, Tempel, W, He, H, Shen, Y, Wang, J, Brothers, G, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-07-09
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the human KIF9 motor domain in complex with ADP
To be Published
3TEQ
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BU of 3teq by Molmil
Crystal structure of SOAR domain
Descriptor: PHOSPHATE ION, Stromal interaction molecule 1
Authors:Yang, X, Jin, H, Cai, X, Shen, Y.
Deposit date:2011-08-15
Release date:2012-04-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and mechanistic insights into the activation of Stromal interaction molecule 1 (STIM1).
Proc.Natl.Acad.Sci.USA, 109, 2012
3TUO
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BU of 3tuo by Molmil
Crystal structure of N-terminal domain of DNA-binding protein satb1
Descriptor: DNA-binding protein SATB1
Authors:Wang, Z, Yang, X, Long, J, Shen, Y.
Deposit date:2011-09-17
Release date:2012-02-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:The structural basis for the oligomerization of the N-terminal domain of SATB1
Nucleic Acids Res., 40, 2012
3TER
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BU of 3ter by Molmil
Crystal structure of SOAR domain with Inhibition helix from C. elegans
Descriptor: Mammalian stromal interaction molecule-1
Authors:Yang, X, Jin, H, Cai, X, Shen, Y.
Deposit date:2011-08-15
Release date:2012-04-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:Structural and mechanistic insights into the activation of Stromal interaction molecule 1 (STIM1).
Proc.Natl.Acad.Sci.USA, 109, 2012
3UIT
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BU of 3uit by Molmil
Overall structure of Patj/Pals1/Mals complex
Descriptor: ACETATE ION, InaD-like protein, MAGUK p55 subfamily member 5, ...
Authors:Zhang, J, Yang, X, Long, J, Shen, Y.
Deposit date:2011-11-06
Release date:2012-02-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of an L27 domain heterotrimer from cell polarity complex Patj/Pals1/Mals2 reveals mutually independent L27 domain assembly mode
J.Biol.Chem., 287, 2012
3UIU
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BU of 3uiu by Molmil
Crystal structure of Apo-PKR kinase domain
Descriptor: Interferon-induced, double-stranded RNA-activated protein kinase
Authors:Li, F, Li, S, Yang, X, Shen, Y, Zhang, T.
Deposit date:2011-11-06
Release date:2012-11-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.903 Å)
Cite:Crystal structure of Apo-PKR kinase domain
TO BE PUBLISHED
2YD4
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BU of 2yd4 by Molmil
Crystal structure of the N-terminal Ig1-2 module of Chicken Receptor Protein Tyrosine Phosphatase Sigma
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, PROTEIN-TYROSINE PHOSPHATASE CRYPALPHA1 ISOFORM, ...
Authors:Coles, C.H, Shen, Y, Tenney, A.P, Siebold, C, Sutton, G.C, Lu, W, Gallagher, J.T, Jones, E.Y, Flanagan, J.G, Aricescu, A.R.
Deposit date:2011-03-17
Release date:2011-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Proteoglycan-Specific Molecular Switch for Rptp Sigma Clustering and Neuronal Extension.
Science, 332, 2011
2YD5
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BU of 2yd5 by Molmil
Crystal structure of the N-terminal Ig1-2 module of Human Receptor Protein Tyrosine Phosphatase LAR
Descriptor: RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE F
Authors:Coles, C.H, Shen, Y, Tenney, A.P, Siebold, C, Sutton, G.C, Lu, W, Gallagher, J.T, Jones, E.Y, Flanagan, J.G, Aricescu, A.R.
Deposit date:2011-03-17
Release date:2011-04-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Proteoglycan-Specific Molecular Switch for Rptp Sigma Clustering and Neuronal Extension.
Science, 332, 2011
2YD3
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BU of 2yd3 by Molmil
Crystal structure of the N-terminal Ig1-2 module of Human Receptor Protein Tyrosine Phosphatase Sigma
Descriptor: CHLORIDE ION, RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE S, SODIUM ION
Authors:Coles, C.H, Shen, Y, Tenney, A.P, Siebold, C, Sutton, G.C, Lu, W, Gallagher, J.T, Jones, E.Y, Flanagan, J.G, Aricescu, A.R.
Deposit date:2011-03-17
Release date:2011-04-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Proteoglycan-Specific Molecular Switch for Rptp Sigma Clustering and Neuronal Extension.
Science, 332, 2011
2YD6
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BU of 2yd6 by Molmil
Crystal structure of the N-terminal Ig1-2 module of Human Receptor Protein Tyrosine Phosphatase Delta
Descriptor: CHLORIDE ION, CITRATE ANION, PTPRD PROTEIN
Authors:Coles, C.H, Shen, Y, Tenney, A.P, Siebold, C, Sutton, G.C, Lu, W, Gallagher, J.T, Jones, E.Y, Flanagan, J.G, Aricescu, A.R.
Deposit date:2011-03-17
Release date:2011-04-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Proteoglycan-Specific Molecular Switch for Rptp Sigma Clustering and Neuronal Extension.
Science, 332, 2011
2YD2
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BU of 2yd2 by Molmil
Crystal structure of the N-terminal Ig1-2 module of Human Receptor Protein Tyrosine Phosphatase Sigma
Descriptor: CHLORIDE ION, IODIDE ION, RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE S
Authors:Coles, C.H, Shen, Y, Tenney, A.P, Siebold, C, Sutton, G.C, Lu, W, Gallagher, J.T, Jones, E.Y, Flanagan, J.G, Aricescu, A.R.
Deposit date:2011-03-17
Release date:2011-04-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.552 Å)
Cite:Proteoglycan-Specific Molecular Switch for Rptp Sigma Clustering and Neuronal Extension.
Science, 332, 2011

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