Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 296 件

7MBW
DownloadVisualize
BU of 7mbw by Molmil
Crystal structure of TnsC(1-503)A225V
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transposon Tn7 transposition protein TnsC
著者Shen, Y, Guarne, A.
登録日2021-04-01
公開日2022-02-23
最終更新日2022-03-02
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for DNA targeting by the Tn7 transposon.
Nat.Struct.Mol.Biol., 29, 2022
8K8S
DownloadVisualize
BU of 8k8s by Molmil
F8-A22-E4 complex of MPXV in complex with DNA and Ara-CTP
分子名称: 4-amino-1-{5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}pyrimidin-2(1H)-one, DNA (5'-D(*AP*TP*CP*CP*TP*CP*CP*CP*CP*TP*AP*C)-3'), DNA (5'-D(P*TP*AP*GP*GP*TP*AP*GP*GP*GP*GP*AP*GP*GP*AP*T)-3'), ...
著者Shen, Y.P, Li, Y.N, Yan, R.H.
登録日2023-07-31
公開日2024-06-05
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structural basis for the inhibition mechanism of the DNA polymerase holoenzyme from mpox virus.
Structure, 32, 2024
8K8U
DownloadVisualize
BU of 8k8u by Molmil
F8-A22-E4 complex of MPXV in complex with DNA and dCTP
分子名称: CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*TP*CP*CP*TP*CP*CP*CP*CP*TP*AP*C)-3'), DNA (5'-D(P*AP*AP*GP*GP*TP*AP*GP*GP*GP*GP*AP*GP*GP*AP*T)-3'), ...
著者Shen, Y.P, Li, Y.N, Yan, R.H.
登録日2023-07-31
公開日2024-06-05
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Structural basis for the inhibition mechanism of the DNA polymerase holoenzyme from mpox virus.
Structure, 32, 2024
7MCS
DownloadVisualize
BU of 7mcs by Molmil
Cryo-electron microscopy structure of TnsC(1-503)A225V bound to DNA
分子名称: DNA (5'-D(P*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION, ...
著者Shen, Y, Ortega, J, Guarne, A.
登録日2021-04-02
公開日2022-02-23
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Structural basis for DNA targeting by the Tn7 transposon.
Nat.Struct.Mol.Biol., 29, 2022
3COJ
DownloadVisualize
BU of 3coj by Molmil
Crystal Structure of the BRCT Domains of Human BRCA1 in Complex with a Phosphorylated Peptide from Human Acetyl-CoA Carboxylase 1
分子名称: Acetyl-CoA carboxylase 1, Breast cancer type 1 susceptibility protein
著者Shen, Y, Tong, L.
登録日2008-03-28
公開日2008-05-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Structural evidence for direct interactions between the BRCT domains of human BRCA1 and a phospho-peptide from human ACC1
Biochemistry, 47, 2008
3EAP
DownloadVisualize
BU of 3eap by Molmil
Crystal structure of the RhoGAP domain of ARHGAP11A
分子名称: Rho GTPase-activating protein 11A, UNKNOWN ATOM OR ION
著者Shen, Y, Shen, L, Tong, Y, Tempel, W, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium, Structural Genomics Consortium (SGC)
登録日2008-08-26
公開日2008-09-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the RhoGAP domain of ARHGAP11A
To be Published
1PK0
DownloadVisualize
BU of 1pk0 by Molmil
Crystal Structure of the EF3-CaM complexed with PMEApp
分子名称: (ADENIN-9-YL-ETHOXYMETHYL)-HYDROXYPHOSPHINYL-DIPHOSPHATE, CALCIUM ION, Calmodulin, ...
著者Shen, Y, Tang, W.J.
登録日2003-06-04
公開日2004-02-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Selective inhibition of anthrax edema factor by adefovir, a drug for chronic hepatitis B virus infection.
Proc.Natl.Acad.Sci.USA, 101, 2004
1IHY
DownloadVisualize
BU of 1ihy by Molmil
GAPDH complexed with ADP-ribose
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, SULFATE ION
著者Shen, Y.-Q, Song, S.-Y, Lin, Z.-J.
登録日2001-04-20
公開日2002-07-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of D-glyceraldehyde-3-phosphate dehydrogenase complexed with coenzyme analogues.
Acta Crystallogr.,Sect.D, 58, 2002
1IHX
DownloadVisualize
BU of 1ihx by Molmil
Crystal structure of two D-glyceraldehyde-3-phosphate dehydrogenase complexes: a case of asymmetry
分子名称: GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, SULFATE ION, THIONICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Shen, Y.-Q, Song, S.-Y, Lin, Z.-J.
登録日2001-04-20
公開日2002-07-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of D-glyceraldehyde-3-phosphate dehydrogenase complexed with coenzyme analogues.
Acta Crystallogr.,Sect.D, 58, 2002
1CRW
DownloadVisualize
BU of 1crw by Molmil
CRYSTAL STRUCTURE OF APO-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM PALINURUS VERSICOLOR AT 2.0A RESOLUTION
分子名称: D-GLYCERALDEHYDE-3-PHOSPHATE-DEHYDROGENASE
著者Shen, Y, Li, J, Song, S, Lin, Z.
登録日1999-08-16
公開日2000-09-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of apo-glyceraldehyde-3-phosphate dehydrogenase from Palinurus versicolor.
J.Struct.Biol., 130, 2000
1LVC
DownloadVisualize
BU of 1lvc by Molmil
Crystal structure of the adenylyl cyclase domain of anthrax edema factor (EF) in complex with calmodulin and 2' deoxy, 3' anthraniloyl ATP
分子名称: 3'ANTHRANILOYL-2'-DEOXY-ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, YTTERBIUM (III) ION, ...
著者Shen, Y, Lee, Y.-S, Soelaiman, S, Bergson, P, Lu, D, Chen, A, Beckingham, K, Grabarek, Z, Mrksich, M, Tang, W.-J.
登録日2002-05-28
公開日2002-12-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Physiological calcium concentrations regulate calmodulin binding and catalysis of adenylyl cyclase exotoxins
Embo J., 21, 2002
1S26
DownloadVisualize
BU of 1s26 by Molmil
Structure of Anthrax Edema Factor-Calmodulin-alpha,beta-methyleneadenosine 5'-triphosphate Complex Reveals an Alternative Mode of ATP Binding to the Catalytic Site
分子名称: CALCIUM ION, Calmodulin, Calmodulin-sensitive adenylate cyclase, ...
著者Shen, Y, Zhukovskaya, N.L, Bohm, A, Tang, W.-J.
登録日2004-01-08
公開日2004-04-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of anthrax edema factor-calmodulin-adenosine-5'-(alpha,beta-methylene)-triphosphate complex reveals an alternative mode of ATP binding to the catalytic site
Biochem.Biophys.Res.Commun., 317, 2004
3JZY
DownloadVisualize
BU of 3jzy by Molmil
Crystal structure of human Intersectin 2 C2 domain
分子名称: Intersectin 2, UNKNOWN ATOM OR ION
著者Shen, Y, Tempel, W, Tong, Y, Li, Y, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2009-09-24
公開日2009-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Crystal structure of human Intersectin 2 C2 domain
To be Published
1I0E
DownloadVisualize
BU of 1i0e by Molmil
CRYSTAL STRUCTURE OF CREATINE KINASE FROM HUMAN MUSCLE
分子名称: CREATINE KINASE,M CHAIN
著者Shen, Y.-Q, Tang, L, Zhou, H.-M, Lin, Z.-J.
登録日2001-01-29
公開日2003-04-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of human muscle creatine kinase.
Acta Crystallogr.,Sect.D, 57, 2001
2R6M
DownloadVisualize
BU of 2r6m by Molmil
Crystal structure of rat CK2-beta subunit
分子名称: Casein kinase II subunit beta, ZINC ION
著者Shen, Y.
登録日2007-09-06
公開日2008-09-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structures of catalytic and regulatory subunits of rat protein kinase CK2
CHIN.SCI.BULL., 54, 2009
1NR3
DownloadVisualize
BU of 1nr3 by Molmil
SOLUTION STRUCTURE OF THE PROTEIN MTH0916: THE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT212
分子名称: DNA-binding protein tfx
著者Shen, Y, Liu, G, Bhaskaran, R, Yee, A, Arrowsmith, C, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2003-01-23
公開日2003-06-10
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献SOLUTION STRUCTURE OF THE PROTEIN MTH0916: THE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT212
To be Published
3KH0
DownloadVisualize
BU of 3kh0 by Molmil
Crystal structure of the Ras-association (RA) domain of RALGDS
分子名称: Ral guanine nucleotide dissociation stimulator, UNKNOWN ATOM OR ION
著者Shen, Y, Tempel, W, Wang, H, Tong, Y, Guan, X, Crombet, L, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2009-10-29
公開日2009-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the Ras-association (RA) domain of RALGDS
to be published
3KKR
DownloadVisualize
BU of 3kkr by Molmil
Crystal structure of catalytic core domain of BIV integrase in crystal form I
分子名称: Integrase, NITRATE ION
著者Shen, Y.
登録日2009-11-06
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.453 Å)
主引用文献Crystal structures of catalytic core domain of BIV integrase: implications for the interaction between integrase and target DNA
Protein Cell, 1, 2010
3KKS
DownloadVisualize
BU of 3kks by Molmil
Crystal structure of catalytic core domain of BIV integrase in crystal form II
分子名称: ACETATE ION, GLYCEROL, Integrase
著者Shen, Y.
登録日2009-11-06
公開日2010-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of catalytic core domain of BIV integrase: implications for the interaction between integrase and target DNA
Protein Cell, 1, 2010
3I6D
DownloadVisualize
BU of 3i6d by Molmil
Crystal structure of PPO from bacillus subtilis with AF
分子名称: 5-[2-CHLORO-4-(TRIFLUOROMETHYL)PHENOXY]-2-NITROBENZOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, ...
著者Shen, Y.
登録日2009-07-06
公開日2009-12-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insight into unique properties of protoporphyrinogen oxidase from Bacillus subtilis
J.Struct.Biol., 170, 2010
5Z3K
DownloadVisualize
BU of 5z3k by Molmil
Crystal structure of glucosidase from Croceicoccus marinus at 1.8 Angstrom resolution
分子名称: GLYCEROL, glucosidase
著者Shen, Y.F, Hu, X.J, Li, J.X.
登録日2018-01-08
公開日2019-01-23
最終更新日2020-08-05
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Structural and Functional Insights Into CmGH1, a Novel GH39 Family beta-Glucosidase From Deep-Sea Bacterium.
Front Microbiol, 10, 2019
2R7I
DownloadVisualize
BU of 2r7i by Molmil
Crystal structure of catalytic subunit of protein kinase CK2
分子名称: Casein kinase II subunit alpha, SULFATE ION
著者Shen, Y.
登録日2007-09-08
公開日2008-09-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献Crystal structures of catalytic and regulatory subunits of rat protein kinase CK2
CHIN.SCI.BULL., 54, 2009
5C54
DownloadVisualize
BU of 5c54 by Molmil
Crystal structure of a novel N-acetylneuraminic acid lyase from Corynebacterium glutamicum
分子名称: Dihydrodipicolinate synthase/N-acetylneuraminate lyase, GLYCEROL
著者Shen, Y, Zhou, J, Xie, J.
登録日2015-06-19
公開日2016-06-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Crystal structure of a novel N-acetylneuraminic acid lyase from Corynebacterium glutamicum
To Be Published
3DJ1
DownloadVisualize
BU of 3dj1 by Molmil
crystal structure of TIP-1 wild type
分子名称: SULFATE ION, Tax1-binding protein 3
著者Shen, Y.
登録日2008-06-21
公開日2008-10-21
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1.
J.Mol.Biol., 384, 2008
1XFW
DownloadVisualize
BU of 1xfw by Molmil
Crystal structure of anthrax edema factor (EF) in complex with calmodulin and 3'5' cyclic AMP (cAMP)
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CALCIUM ION, Calmodulin 2, ...
著者Shen, Y, Zhukovskaya, N.L, Guo, Q, Florian, J, Tang, W.J.
登録日2004-09-15
公開日2005-05-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Calcium-independent calmodulin binding and two-metal-ion catalytic mechanism of anthrax edema factor.
EMBO J., 24, 2005

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon