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PDB: 354 件

7EW6
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Barley photosystem I-LHCI-Lhca5 supercomplex
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Wang, W.D, Shen, L, Tang, K, Han, G.Y, Zhang, X, Shen, J.R.
登録日2021-05-24
公開日2021-12-22
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare.
Nature, 601, 2022
7EU3
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Chloroplast NDH complex
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BETA-CAROTENE, ...
著者Wang, W.D, Shen, L, Tang, K, Han, G.Y, Zhang, X, Shen, J.R.
登録日2021-05-15
公開日2021-12-29
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare.
Nature, 601, 2022
7EWK
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Barley photosystem I-LHCI-Lhca6 supercomplex
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Wang, W.D, Shen, L, Tang, K, Han, G.Y, Zhang, X, Shen, J.R.
登録日2021-05-25
公開日2022-01-12
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.88 Å)
主引用文献Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare.
Nature, 601, 2022
8AP1
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Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex with two GTP molecules poised for de novo initiation (IC2)
分子名称: DNA-directed RNA polymerase, mitochondrial, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Goovaerts, Q, Shen, J, Patel, S.S, Das, K.
登録日2022-08-09
公開日2023-08-23
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structures illustrate step-by-step mitochondrial transcription initiation.
Nature, 622, 2023
8ATV
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Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex with 5-mer RNA, pppGpGpApApA (IC5)
分子名称: DNA (36-MER), DNA-directed RNA polymerase, mitochondrial, ...
著者Goovaerts, Q, Shen, J, Patel, S.S, Das, K.
登録日2022-08-24
公開日2023-08-30
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Structures illustrate step-by-step mitochondrial transcription initiation.
Nature, 622, 2023
8ATW
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Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex with 6-mer RNA, pppGpGpApApApU (IC6)
分子名称: DNA-directed RNA polymerase, mitochondrial, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Goovaerts, Q, Shen, J, Patel, S.S, Das, K.
登録日2022-08-24
公開日2023-08-30
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Structures illustrate step-by-step mitochondrial transcription initiation.
Nature, 622, 2023
8ATT
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Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex with 4-mer RNA, pppGpGpUpA (IC4)
分子名称: DNA-directed RNA polymerase, mitochondrial, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Goovaerts, Q, Shen, J, Patel, S.S, Das, K.
登録日2022-08-24
公開日2023-08-30
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Structures illustrate step-by-step mitochondrial transcription initiation.
Nature, 622, 2023
6Z18
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Crystal structure of RNA-10mer: CCGG(N4,N4-dimethyl-C)GCCGG; R32 form
分子名称: RNA-10mer: CCGG(N4,N4-dimethyl-C)GCCGG
著者Ruszkowski, M, Sekula, B, Mao, S, Haruehanroengra, P, Sheng, J.
登録日2020-05-12
公開日2020-09-02
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Base pairing, structural and functional insights into N4-methylcytidine (m4C) and N4,N4-dimethylcytidine (m42C) modified RNA.
Nucleic Acids Res., 48, 2020
8QXB
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TDP-43 amyloid fibrils: Morphology-2
分子名称: TAR DNA-binding protein 43
著者Sharma, K, Shenoy, J, Loquet, A, Schmidt, M, Faendrich, M.
登録日2023-10-24
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献Cryo-EM observation of the amyloid key structure of polymorphic TDP-43 amyloid fibrils.
Nat Commun, 15, 2024
8QXA
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TDP-43 amyloid fibrils: Morphology-1b
分子名称: TAR DNA-binding protein 43
著者Sharma, K, Shenoy, J, Loquet, A, Schmidt, M, Faendrich, M.
登録日2023-10-24
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (4.05 Å)
主引用文献Cryo-EM observation of the amyloid key structure of polymorphic TDP-43 amyloid fibrils.
Nat Commun, 15, 2024
5TV8
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A. aeolicus BioW with AMP-CPP and pimelate
分子名称: 6-carboxyhexanoate--CoA ligase, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, ...
著者Estrada, P, Manandhar, M, Dong, S.-H, Deveryshetty, J, Agarwal, V, Cronan, J.E, Nair, S.K.
登録日2016-11-08
公開日2016-12-07
最終更新日2017-05-31
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献The pimeloyl-CoA synthetase BioW defines a new fold for adenylate-forming enzymes.
Nat. Chem. Biol., 13, 2017
6VG3
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Structure of unliganded, inactive PTK7 kinase domain
分子名称: Inactive tyrosine-protein kinase 7
著者Malhotra, K, Stayrook, S.E, Sheetz, J, Lemmon, M.A.
登録日2020-01-07
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural insights into receptor tyrosine kinase pseudokinase function
Mol.Cell, 2020
5TV5
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BioW from Aquifex aeoulicus
分子名称: 6-carboxyhexanoate--CoA ligase
著者Estrada, P, Manandhar, M, Dong, S.-H, Deveryshetty, J, Agarwal, V, Cronan, J.E, Nair, S.K.
登録日2016-11-08
公開日2016-12-07
最終更新日2017-05-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The pimeloyl-CoA synthetase BioW defines a new fold for adenylate-forming enzymes.
Nat. Chem. Biol., 13, 2017
5TV6
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A. aeolicus BioW with pimelate
分子名称: 6-carboxyhexanoate--CoA ligase, PIMELIC ACID
著者Estrada, P, Manandhar, M, Dong, S.-H, Deveryshetty, J, Agarwal, V, Cronan, J.E, Nair, S.K.
登録日2016-11-08
公開日2016-12-07
最終更新日2017-05-31
実験手法X-RAY DIFFRACTION (2.456 Å)
主引用文献The pimeloyl-CoA synthetase BioW defines a new fold for adenylate-forming enzymes.
Nat. Chem. Biol., 13, 2017
5TVA
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BU of 5tva by Molmil
A. aeolicus BioW with AMP and CoA
分子名称: 6-carboxyhexanoate--CoA ligase, ADENOSINE MONOPHOSPHATE, COENZYME A
著者Estrada, P, Manandhar, M, Dong, S.-H, Deveryshetty, J, Agarwal, V, Cronan, J.E, Nair, S.K.
登録日2016-11-08
公開日2016-12-07
最終更新日2017-05-31
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The pimeloyl-CoA synthetase BioW defines a new fold for adenylate-forming enzymes.
Nat. Chem. Biol., 13, 2017
5U0Q
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BU of 5u0q by Molmil
RNA-DNA heptamer duplex with one 2'-5'-linkage
分子名称: COBALT (II) ION, DNA/RNA (5'-R(*GP*GP*AP*GP*C)-D(P*T)-R(P*A)-3'), MAGNESIUM ION, ...
著者Luo, Z, Sheng, J.
登録日2016-11-26
公開日2017-11-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献RNA-DNA heptamer duplex with one 2'-5'-linkage
To Be Published
5TDK
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BU of 5tdk by Molmil
RNA decamer duplex with eight 2'-5'-linkages
分子名称: RNA (5'-R(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3'), STRONTIUM ION
著者Luo, Z, Sheng, J.
登録日2016-09-19
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Structural insights into RNA duplexes with multiple 2 -5 -linkages.
Nucleic Acids Res., 45, 2017
7UBY
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BU of 7uby by Molmil
Structure of the GTD domain of Clostridium difficile toxin A in complex with VHH AH3
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Glucosyltransferase TcdA, ...
著者Chen, B, Rongsheng, J, Kay, P.
登録日2022-03-15
公開日2022-11-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Neutralizing epitopes on Clostridioides difficile toxin A revealed by the structures of two camelid VHH antibodies.
Front Immunol, 13, 2022
7U1Z
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Crystal structure of the DRBD and CROPs of TcdA
分子名称: SULFATE ION, Toxin A
著者Baohua, C, Peng, C, Kay, P, Rongsheng, J.
登録日2022-02-22
公開日2022-03-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Structure and conformational dynamics of Clostridioides difficile toxin A.
Life Sci Alliance, 5, 2022
6OM5
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BU of 6om5 by Molmil
Structure of a haemophore from Haemophilus haemolyticus
分子名称: CHLORIDE ION, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Torrado, M, Walshe, J.L, Mackay, J.P, Guss, J.M, Gell, D.A.
登録日2019-04-18
公開日2019-12-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A heme-binding protein produced by Haemophilus haemolyticus inhibits non-typeable Haemophilus influenzae.
Mol.Microbiol., 113, 2020
5TDJ
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RNA decamer duplex with four 2'-5'-linkages
分子名称: RNA (5'-R(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3'), STRONTIUM ION
著者Luo, Z, Sheng, J.
登録日2016-09-19
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into RNA duplexes with multiple 2 -5 -linkages.
Nucleic Acids Res., 45, 2017
7EDA
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BU of 7eda by Molmil
Structure of monomeric photosystem II
分子名称: (3R)-beta,beta-caroten-3-ol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Yu, H, Hamaguchi, T, Nakajima, Y, Kato, K, kawakami, K, Akita, F, Yonekura, K, Shen, J.R.
登録日2021-03-15
公開日2021-07-07
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Cryo-EM structure of monomeric photosystem II at 2.78 angstrom resolution reveals factors important for the formation of dimer.
Biochim Biophys Acta Bioenerg, 1862, 2021
5ZHP
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M3 muscarinic acetylcholine receptor in complex with a selective antagonist
分子名称: (1R,2R,4S,5S,7s)-7-({[4-fluoro-2-(thiophen-2-yl)phenyl]carbamoyl}oxy)-9,9-dimethyl-3-oxa-9-azatricyclo[3.3.1.0~2,4~]nonan-9-ium, CITRIC ACID, HEXAETHYLENE GLYCOL, ...
著者Liu, H, Hofmann, J, Fish, I, Schaake, B, Eitel, K, Bartuschat, A, Kaindl, J, Rampp, H, Banerjee, A, Hubner, H, Clark, M.J, Vincent, S.G, Fisher, J, Heinrich, M, Hirata, K, Liu, X, Sunahara, R.K, Shoichet, B.K, Kobilka, B.K, Gmeiner, P.
登録日2018-03-13
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure-guided development of selective M3 muscarinic acetylcholine receptor antagonists
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6WY3
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Crystal structure of RNA-10mer: CCGG(N4,N4-dimethyl-C)GCCGG; P212121 form
分子名称: RNA (5'-R(*CP*CP*GP*GP*(LV2)P*GP*CP*CP*GP*G)-3')
著者Sekula, B, Ruszkowski, M, Mao, S, Haruehanroengra, P, Sheng, J.
登録日2020-05-12
公開日2020-09-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.647 Å)
主引用文献Base pairing, structural and functional insights into N4-methylcytidine (m4C) and N4,N4-dimethylcytidine (m42C) modified RNA.
Nucleic Acids Res., 48, 2020
6WW6
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Crystal structure of EutV bound to RNA
分子名称: BERYLLIUM TRIFLUORIDE ION, Response regulator, eutP P2
著者Ataide, S.F, Walshe, J.L.
登録日2020-05-07
公開日2021-11-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structural characterization of the ANTAR antiterminator domain bound to RNA.
Nucleic Acids Res., 50, 2022

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