Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 161 results
5Z4V
DownloadVisualize
BU of 5z4v by Molmil
Crystal structure of the sheep signalling glycoprotein (SPS-40) complex with 2-methyl-2-4-pentanediol at 1.65A resolution reveals specific binding characteristics of SPS-40
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3-like protein 1
Authors:Sharma, P, Singh, P.K, Singh, N, Sharma, S, Kaur, P, Betzel, C, Singh, T.P.
Deposit date:2018-01-15
Release date:2018-02-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the sheep signalling glycoprotein (SPS-40) complex with 2-methyl-2-4-pentanediol at 1.65A resolution reveals specific binding characteristics of SPS-40
To Be Published
8DYE
DownloadVisualize
BU of 8dye by Molmil
Crystal structure of human SDHA-SDHAF4 assembly intermediate
Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Sharma, P, Maklashina, E, Cecchini, G, Iverson, T.M.
Deposit date:2022-08-04
Release date:2024-01-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Disordered-to-ordered transitions in assembly factors allow the complex II catalytic subunit to switch binding partners.
Nat Commun, 15, 2024
8DYD
DownloadVisualize
BU of 8dyd by Molmil
Crystal structure of human SDHA-SDHAF2-SDHAF4 assembly intermediate
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Sharma, P, Maklashina, E, Cecchini, G, Iverson, T.M.
Deposit date:2022-08-04
Release date:2024-01-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Disordered-to-ordered transitions in assembly factors allow the complex II catalytic subunit to switch binding partners.
Nat Commun, 15, 2024
3RT4
DownloadVisualize
BU of 3rt4 by Molmil
Structural Basis of Recognition of Pathogen-associated Molecular Patterns and Inhibition of Proinflammatory Cytokines by Camel Peptidoglycan Recognition Protein
Descriptor: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, L(+)-TARTARIC ACID, Peptidoglycan recognition protein 1
Authors:Sharma, P, Dube, D, Singh, A, Mishra, B, Singh, N, Sinha, M, Dey, S, Kaur, P, Mitra, D.K, Sharma, S, Singh, T.P.
Deposit date:2011-05-03
Release date:2011-06-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis of Recognition of Pathogen-associated Molecular Patterns and Inhibition of Proinflammatory Cytokines by Camel Peptidoglycan Recognition Protein.
J.Biol.Chem., 286, 2011
3T2V
DownloadVisualize
BU of 3t2v by Molmil
Crystal structure of the complex of peptidoglycan recognition protein-short (CPGRP-S) with mycolic acid at 2.5 A resolution
Descriptor: (2S,3R)-2-hexyl-3-hydroxynonanoic acid, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Sharma, P, Dube, D, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-07-23
Release date:2011-08-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural basis of the binding of fatty acids to peptidoglycan recognition protein, PGRP-S through second binding site
Arch.Biochem.Biophys., 529, 2013
3T39
DownloadVisualize
BU of 3t39 by Molmil
Crystal structure of the complex of camel peptidoglycan recognition protein(CPGRP-S) with a mycobacterium metabolite shikimate at 2.7 A resolution
Descriptor: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, GLYCEROL, Peptidoglycan recognition protein 1, ...
Authors:Sharma, P, Dube, D, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-07-25
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein-short (CPGRP-S) with a mycobacterium metabolite shikimate at 2.7 A resolution
To be Published
3QJ1
DownloadVisualize
BU of 3qj1 by Molmil
Crystal structure of camel peptidoglycan recognition protein, PGRP-S with a trapped diethylene glycol in the ligand diffusion channel at 3.2 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Sharma, P, Yamini, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-01-28
Release date:2011-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of camel peptidoglycan recognition protein, PGRP-S with a trapped diethylene glycol in the ligand diffusion channel at 3.2 A resolution
To be Published
5E0B
DownloadVisualize
BU of 5e0b by Molmil
Crystal structure of the complex of Peptidoglycan recognition protein PGRP-S with N-Acetyl Muramic acid at 2.6 A resolution
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, N-acetyl-beta-muramic acid, ...
Authors:Sharma, P, Yamini, S, Dube, D, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2015-09-28
Release date:2015-10-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the complex of Peptidoglycan recognition protein PGRP-S with N-Acetyl Muramic acid at 2.6 A resolution
To Be Published
5GVY
DownloadVisualize
BU of 5gvy by Molmil
Crystal structure of SALT protein from Oryza sativa
Descriptor: Salt stress-induced protein, alpha-D-mannopyranose
Authors:Sharma, P, Sagar, A, Kaur, N, Sharma, I, Kirat, K, Ashish, F.N.U, Pati, P.K.
Deposit date:2016-09-07
Release date:2017-09-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.662 Å)
Cite:Structural insights into rice SalTol QTL located SALT protein.
Sci Rep, 10, 2020
2R2K
DownloadVisualize
BU of 2r2k by Molmil
Crystal structure of the complex of camel peptidoglycan recognition protein with disaccharide at 3.2A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, L(+)-TARTARIC ACID, Peptidoglycan recognition protein
Authors:Sharma, P, Jain, R, Singh, N, Sharma, S, Bhushan, A, Kaur, P, Singh, T.P.
Deposit date:2007-08-26
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal structure of the complex of camel peptidoglycan recognition protein with disaccharide at 3.2A resolution
To be Published
2R90
DownloadVisualize
BU of 2r90 by Molmil
Crystal structure of cameline peptidoglycan recognition protein at 2.8A resolution
Descriptor: Peptidoglycan recognition protein
Authors:Sharma, P, Singh, N, Sinha, M, Sharma, S, Kaur, P, Srinivasan, A, Singh, T.P.
Deposit date:2007-09-12
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of cameline peptidoglycan recognition protein at 2.8A resolution
To be Published
2Z9N
DownloadVisualize
BU of 2z9n by Molmil
Crystal structure of cameline peptidoglycan recognition protein at 3.2 A resolution
Descriptor: L(+)-TARTARIC ACID, Peptidoglycan recognition protein
Authors:Sharma, P, Jain, R, Singh, N, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2007-09-21
Release date:2007-10-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of cameline peptidoglycan recognition protein at 3.2 A resolution
To be Published
3C2X
DownloadVisualize
BU of 3c2x by Molmil
Crystal structure of peptidoglycan recognition protein at 1.8A resolution
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Peptidoglycan recognition protein, ...
Authors:Sharma, P, Singh, N, Sinha, M, Sharma, S, Perbandt, M, Betzel, C, Kaur, P, Srinivasan, A, Singh, T.P.
Deposit date:2008-01-26
Release date:2008-03-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of the peptidoglycan recognition protein at 1.8 A resolution reveals dual strategy to combat infection through two independent functional homodimers
J.Mol.Biol., 378, 2008
3RNX
DownloadVisualize
BU of 3rnx by Molmil
Crystal Structure of Lysozyme in 30% ethanol
Descriptor: ACETATE ION, CHLORIDE ION, ETHANOL, ...
Authors:Sharma, P, Solanki, A.K, Ashish
Deposit date:2011-04-24
Release date:2011-05-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.856 Å)
Cite:Crystal Structure of Lysozyme in 30% ethanol
to be published
3RW8
DownloadVisualize
BU of 3rw8 by Molmil
Crystal structure of lysozyme in 40% ethanol
Descriptor: ACETATE ION, CHLORIDE ION, ETHANOL, ...
Authors:Sharma, P, Solanki, A.K, Ashish
Deposit date:2011-05-08
Release date:2011-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.855 Å)
Cite:Crystal structure of lysozyme in 40% ethanol
to be published
3RT5
DownloadVisualize
BU of 3rt5 by Molmil
Lysozyme in 30% propanol
Descriptor: ACETATE ION, CHLORIDE ION, ISOPROPYL ALCOHOL, ...
Authors:Sharma, P, Solanki, A.K, Ashish
Deposit date:2011-05-03
Release date:2011-06-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Lysozyme in 30% propanol
to be published
3T6U
DownloadVisualize
BU of 3t6u by Molmil
Crystal Structure of Lysozyme in 40% sucrose
Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION, ...
Authors:Sharma, P, Singh, S, Ashish
Deposit date:2011-07-29
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.213 Å)
Cite:Crystal Structure of Lysozyme in 40% sucrose
to be published
4GF9
DownloadVisualize
BU of 4gf9 by Molmil
Structural insights into the dual strategy of recognition of peptidoglycan recognition protein, PGRP-S: ternary complex of PGRP-S with LPS and fatty acid
Descriptor: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, GLYCEROL, Peptidoglycan recognition protein 1, ...
Authors:Sharma, P, Dube, D, Sinha, M, Yadav, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2012-08-03
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the dual strategy of recognition by peptidoglycan recognition protein, PGRP-S: structure of the ternary complex of PGRP-S with lipopolysaccharide and stearic acid.
Plos One, 8, 2013
3CG9
DownloadVisualize
BU of 3cg9 by Molmil
Crystal structure of the complex of peptidoglycan recognition protein with methyloxane-2,3,4,5-tetrol at 2.9 A resolution
Descriptor: L(+)-TARTARIC ACID, Peptidoglycan recognition protein, alpha-L-rhamnopyranose
Authors:Sharma, P, Kaur, A, Singh, N, Sharma, S, Bhushan, A, Pathak, K.M.L, Kaur, P, Singh, T.P.
Deposit date:2008-03-05
Release date:2008-04-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein with methyoxane-2,3,4,5-tetrol at 2.9 A resolution
To be Published
3COR
DownloadVisualize
BU of 3cor by Molmil
Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with N-acetylgalactosamine at 3.1 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, L(+)-TARTARIC ACID, Peptidoglycan recognition protein
Authors:Sharma, P, Vikram, G, Singh, N, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2008-03-29
Release date:2008-04-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with N-acetylgalactosamine at 3.1 A resolution
To be Published
3NG4
DownloadVisualize
BU of 3ng4 by Molmil
Ternary complex of peptidoglycan recognition protein (PGRP-S) with Maltose and N-Acetylglucosamine at 1.7 A Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Peptidoglycan recognition protein 1, ...
Authors:Sharma, P, Dube, D, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-06-10
Release date:2010-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Multiligand specificity of pathogen-associated molecular pattern-binding site in peptidoglycan recognition protein
J.Biol.Chem., 286, 2011
3O4K
DownloadVisualize
BU of 3o4k by Molmil
Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) and lipoteichoic acid at 2.1 A resolution
Descriptor: (2S)-1-({3-O-[2-(acetylamino)-4-amino-2,4,6-trideoxy-beta-D-galactopyranosyl]-alpha-D-glucopyranosyl}oxy)-3-(heptanoyloxy)propan-2-yl (7Z)-pentadec-7-enoate, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Sharma, P, Dube, D, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-07-27
Release date:2010-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural basis of recognition of pathogen-associated molecular patterns and inhibition of proinflammatory cytokines by camel peptidoglycan recognition protein
J.Biol.Chem., 286, 2011
3NW3
DownloadVisualize
BU of 3nw3 by Molmil
Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with the PGN Fragment at 2.5 A resolution
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, ALANINE, D-GLUTAMINE, ...
Authors:Sharma, P, Dube, D, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-07-09
Release date:2010-08-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Multiligand specificity of pathogen-associated molecular pattern-binding site in peptidoglycan recognition protein
J.Biol.Chem., 286, 2011
3OGX
DownloadVisualize
BU of 3ogx by Molmil
Crystal structure of the complex of Peptidoglycan Recognition protein (PGRP-s) with Heparin-Dissacharide at 2.8 A resolution
Descriptor: 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Sharma, P, Dube, D, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-08-17
Release date:2010-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of heparin binding to camel peptidoglycan recognition protein-S
Int J Biochem Mol Biol, 3, 2012
3SP3
DownloadVisualize
BU of 3sp3 by Molmil
Lysozyme in 20% sucrose
Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION, ...
Authors:Sharma, P, Solanki, A.K, Ashish
Deposit date:2011-07-01
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Lysozyme in 20% sucrose
to be published

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon