Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 763 results

5MFB
DownloadVisualize
BU of 5mfb by Molmil
Designed armadillo repeat protein YIII(Dq)4CqI
Descriptor: YIII(Dq)4CqI
Authors:Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Curvature of designed armadillo repeat proteins allows modular peptide binding.
J. Struct. Biol., 201, 2018
5MFN
DownloadVisualize
BU of 5mfn by Molmil
Designed armadillo repeat protein YIIIM5AII
Descriptor: CALCIUM ION, D-MALATE, YIIIM5AII
Authors:Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Curvature of designed armadillo repeat proteins allows modular peptide binding.
J. Struct. Biol., 201, 2018
5MA9
DownloadVisualize
BU of 5ma9 by Molmil
GFP-binding DARPin fusion gc_R11
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, R11
Authors:Hansen, S, Stueber, J, Ernst, P, Koch, A, Bojar, D, Batyuk, A, Plueckthun, A.
Deposit date:2016-11-03
Release date:2017-11-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Design and applications of a clamp for Green Fluorescent Protein with picomolar affinity.
Sci Rep, 7, 2017
7LFV
DownloadVisualize
BU of 7lfv by Molmil
Crystal structure of the SARS CoV-1 Papain-like protease in complex with peptide inhibitor VIR251
Descriptor: 1,2-ETHANEDIOL, AMMONIUM ION, CHLORIDE ION, ...
Authors:Olsen, S.K, Lv, Z.
Deposit date:2021-01-18
Release date:2021-11-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:A molecular sensor determines the ubiquitin substrate specificity of SARS-CoV-2 papain-like protease.
Cell Rep, 36, 2021
5MA5
DownloadVisualize
BU of 5ma5 by Molmil
GFP-binding DARPin fusion gc_K11
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, Green fluorescent protein, ...
Authors:Hansen, S, Stueber, J, Ernst, P, Koch, A, Bojar, D, Batyuk, A, Plueckthun, A.
Deposit date:2016-11-03
Release date:2017-11-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Design and applications of a clamp for Green Fluorescent Protein with picomolar affinity.
Sci Rep, 7, 2017
6ZPN
DownloadVisualize
BU of 6zpn by Molmil
Crystal structure of Chaetomium thermophilum Raptor
Descriptor: WD_REPEATS_REGION domain-containing protein
Authors:Imseng, S, Boehm, R, Jakob, R.P, Hall, M.N, Hiller, S, Maier, T.
Deposit date:2020-07-08
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The dynamic mechanism of 4E-BP1 recognition and phosphorylation by mTORC1.
Mol.Cell, 81, 2021
4PJ2
DownloadVisualize
BU of 4pj2 by Molmil
Crystal structure of Aeromonas hydrophila PliI in complex with Meretrix lusoria lysozyme
Descriptor: GLYCEROL, Lysozyme, MAGNESIUM ION, ...
Authors:Leysen, S, Van Herreweghe, J.M, Yoneda, K, Ogata, M, Usui, T, Michiels, C.W, Araki, T, Strelkov, S.V.
Deposit date:2014-05-10
Release date:2015-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:The structure of the proteinaceous inhibitor PliI from Aeromonas hydrophila in complex with its target lysozyme.
Acta Crystallogr.,Sect.D, 71, 2015
5MFJ
DownloadVisualize
BU of 5mfj by Molmil
Designed armadillo repeat protein YIII(Dq.V2)4CqI in complex with peptide (KR)5
Descriptor: (KR)5, YIII(Dq.V2)4CqI
Authors:Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Curvature of designed armadillo repeat proteins allows modular peptide binding.
J. Struct. Biol., 201, 2018
4II2
DownloadVisualize
BU of 4ii2 by Molmil
Crystal structure of Ubiquitin activating enzyme 1 (Uba1) in complex with the Ub E2 Ubc4, ubiquitin, and ATP/Mg
Descriptor: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Olsen, S.K, Lima, C.D.
Deposit date:2012-12-19
Release date:2013-02-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a ubiquitin E1-E2 complex: insights to E1-E2 thioester transfer.
Mol.Cell, 49, 2013
3OE3
DownloadVisualize
BU of 3oe3 by Molmil
Crystal structure of PliC-St, periplasmic lysozyme inhibitor of C-type lysozyme from Salmonella typhimurium
Descriptor: Putative periplasmic protein, SODIUM ION
Authors:Leysen, S, Van Herreweghe, J.M, Callewaert, L, Heirbaut, M, Buntinx, P, Michiels, C.W, Strelkov, S.V.
Deposit date:2010-08-12
Release date:2010-12-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Molecular Basis of Bacterial Defense against Host Lysozymes: X-ray Structures of Periplasmic Lysozyme Inhibitors PliI and PliC.
J.Mol.Biol., 405, 2011
6RIM
DownloadVisualize
BU of 6rim by Molmil
Crystal structure of the catalytic domain of the Weissela oryzae botulinum like toxin
Descriptor: CALCIUM ION, Putative botulinum-like toxin Wo, ZINC ION
Authors:Kosenina, S, Masuyer, G, Stenmark, P.
Deposit date:2019-04-24
Release date:2019-05-29
Last modified:2019-08-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the catalytic domain of the Weissella oryzae botulinum-like toxin.
Febs Lett., 593, 2019
5MFE
DownloadVisualize
BU of 5mfe by Molmil
Designed armadillo repeat protein YIIIM5AII in complex with (RR)4 peptide
Descriptor: (RR)4, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Curvature of designed armadillo repeat proteins allows modular peptide binding.
J. Struct. Biol., 201, 2018
5MFM
DownloadVisualize
BU of 5mfm by Molmil
Designed armadillo repeat protein peptide fusion YIIIM6AII_GS11_(KR)5
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Importin subunit alpha, ...
Authors:Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Curvature of designed armadillo repeat proteins allows modular peptide binding.
J. Struct. Biol., 201, 2018
5MFL
DownloadVisualize
BU of 5mfl by Molmil
Designed armadillo repeat protein (KR)5_GS10_YIIIM6AII
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (KR)5_GS10_YIIIM6AII, 1,2-ETHANEDIOL, ...
Authors:Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Curvature of designed armadillo repeat proteins allows modular peptide binding.
J. Struct. Biol., 201, 2018
3OD9
DownloadVisualize
BU of 3od9 by Molmil
Crystal structure of PliI-Ah, periplasmic lysozyme inhibitor of I-type lysozyme from Aeromonas hydrophyla
Descriptor: POTASSIUM ION, Putative exported protein, SODIUM ION
Authors:Leysen, S, Van Herreweghe, J.M, Callewaert, L, Heirbaut, M, Buntinx, P, Michiels, C.W, Strelkov, S.V.
Deposit date:2010-08-11
Release date:2010-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.411 Å)
Cite:Molecular Basis of Bacterial Defense against Host Lysozymes: X-ray Structures of Periplasmic Lysozyme Inhibitors PliI and PliC.
J.Mol.Biol., 405, 2011
4II3
DownloadVisualize
BU of 4ii3 by Molmil
Crystal structure of S. pombe Ubiquitin activating enzyme 1 (Uba1) in complex with ubiquitin and ATP/Mg
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Olsen, S.K, Lima, C.D.
Deposit date:2012-12-19
Release date:2013-02-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of a ubiquitin E1-E2 complex: insights to E1-E2 thioester transfer.
Mol.Cell, 49, 2013
5MFH
DownloadVisualize
BU of 5mfh by Molmil
Designed armadillo repeat protein YIIIM5AII in complex with peptide (RR)5
Descriptor: (RR)5, CALCIUM ION, YIIIM5AII
Authors:Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Curvature of designed armadillo repeat proteins allows modular peptide binding.
J. Struct. Biol., 201, 2018
5MFF
DownloadVisualize
BU of 5mff by Molmil
Designed armadillo repeat protein YIIIM5AII in complex with peptide (RR)5
Descriptor: (RR)5, 1,2-ETHANEDIOL, YIIIM5AII
Authors:Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Curvature of designed armadillo repeat proteins allows modular peptide binding.
J. Struct. Biol., 201, 2018
5MFG
DownloadVisualize
BU of 5mfg by Molmil
Designed armadillo repeat protein YIIIM5AII in complex with peptide (RR)4
Descriptor: (RR)4, CALCIUM ION, YIIIM5AII
Authors:Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Curvature of designed armadillo repeat proteins allows modular peptide binding.
J. Struct. Biol., 201, 2018
5EC9
DownloadVisualize
BU of 5ec9 by Molmil
Retinoic acid receptor alpha in complex with chiral dihydrobenzofuran benzoic acid 9a and a fragment of the coactivator TIF2
Descriptor: 4-[(11S,15R)-4,4,7,7-Tetramethyl-16-oxatetracyclo[8.6.0.03,8.011,15]hexadeca-1(10),2,8-trien-11-yl]benzoic acid, LYS-HIS-LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN-ASP, Retinoic acid receptor RXR-alpha
Authors:Leysen, S, Ottmann, C, Schafer, A, Scheepstra, M, Brunsveld, L, Sunden, R, Ma, J.N, Burnstein, E.S, Olsson, R.
Deposit date:2015-10-20
Release date:2016-03-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Chiral Dihydrobenzofuran Acids Show Potent Retinoid X Receptor-Nuclear Receptor Related 1 Protein Dimer Activation.
J.Med.Chem., 59, 2016
3P53
DownloadVisualize
BU of 3p53 by Molmil
Structure of fascin
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, DODECAETHYLENE GLYCOL, Fascin, ...
Authors:Jansen, S, Dominguez, R.
Deposit date:2010-10-07
Release date:2011-06-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism of actin filament bundling by fascin.
J.Biol.Chem., 286, 2011
4Z1O
DownloadVisualize
BU of 4z1o by Molmil
Hypoxanthine-guanine-xanthine phosphoribosyltransferase (HGXPRT) from Sulfolobus solfataricus in complex with alpha-phosphoribosylpyrophosphoric acid (PRPP) and Magnesium
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, MAGNESIUM ION, Phosphoribosyltransferase
Authors:Christoffersen, S.
Deposit date:2015-03-27
Release date:2015-04-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Hypoxanthine-guanine-xanthine phosphoribosyltransferase (HGXPRT) from Sulfolobus solfataricus in complex with alpha-phosphoribosylpyrophosphoric acid (PRPP) and Magnesium
to be published
4YYP
DownloadVisualize
BU of 4yyp by Molmil
Crystal structure of human PLK4-PB3 in complex with STIL-CC
Descriptor: CHLORIDE ION, SCL-interrupting locus protein, Serine/threonine-protein kinase PLK4
Authors:Imseng, S, Arquint, C, Gabryjonczyk, A, Boehm, R, Sauer, E, Hiller, S, Nigg, E.A, Maier, T.
Deposit date:2015-03-24
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:STIL binding to Polo-box 3 of PLK4 regulates centriole duplication.
Elife, 4, 2015
4ZFN
DownloadVisualize
BU of 4zfn by Molmil
Hypoxanthine-guanine-xanthine phosphoribosyltransferase (HGXPRT) from Sulfolobus solfataricus containing GMP complexed in two different ways together with one or two MG2+
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, Purine phosphoribosyltransferase (GpT-2), ...
Authors:Christoffersen, S.
Deposit date:2015-04-21
Release date:2015-04-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Sulfolobus solfataricus P2
to be published
5MFO
DownloadVisualize
BU of 5mfo by Molmil
Designed armadillo repeat protein YIIIM3AIII
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, YIIIM3AIII
Authors:Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Curvature of designed armadillo repeat proteins allows modular peptide binding.
J. Struct. Biol., 201, 2018

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon