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PDB: 257 results

5TZF
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BU of 5tzf by Molmil
Structure of the BldD CTD(D116A)-(c-di-GMP)2 intermediate, form 1
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DNA-binding protein
Authors:Schumacher, M.A.
Deposit date:2016-11-21
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Streptomyces master regulator BldD binds c-di-GMP sequentially to create a functional BldD2-(c-di-GMP)4 complex.
Nucleic Acids Res., 45, 2017
6UMK
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BU of 6umk by Molmil
Structure of E. coli FtsZ(L178E)-GDP complex
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
Authors:Schumacher, M.A.
Deposit date:2019-10-09
Release date:2020-02-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:High-resolution crystal structures of Escherichia coli FtsZ bound to GDP and GTP.
Acta Crystallogr.,Sect.F, 76, 2020
5E1L
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BU of 5e1l by Molmil
Structural and functional analysis of the E. coli FtsZ interacting protein, ZapC, reveals insight into molecular properties of a novel Z ring stabilizing protein
Descriptor: Cell division protein ZapC
Authors:Schumacher, M.A, Huang, K.-H, Tchorzewski, L, Zeng, W, Janakiraman, A.
Deposit date:2015-09-29
Release date:2015-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and Functional Analyses Reveal Insights into the Molecular Properties of the Escherichia coli Z Ring Stabilizing Protein, ZapC.
J.Biol.Chem., 291, 2016
5HAW
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BU of 5haw by Molmil
structures of the NO factor SlmA bound to DNA and the cytoskeletal cell division protein FtsZ
Descriptor: DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*C)-3'), FtsZ CTT, Nucleoid occlusion factor SlmA
Authors:Schumacher, M.A, Zeng, W.
Deposit date:2015-12-31
Release date:2016-04-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structures of the nucleoid occlusion protein SlmA bound to DNA and the C-terminal domain of the cytoskeletal protein FtsZ.
Proc.Natl.Acad.Sci.USA, 113, 2016
4R4E
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BU of 4r4e by Molmil
Structure of GlnR-DNA complex
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, DNA (5'-D(*AP*TP*TP*CP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*GP*TP*A)-3'), ...
Authors:Schumacher, M.A.
Deposit date:2014-08-19
Release date:2015-03-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4R22
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BU of 4r22 by Molmil
TnrA-DNA complex
Descriptor: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*GP*GP*AP*AP*TP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator TnrA
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4R24
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BU of 4r24 by Molmil
Complete dissection of B. subtilis nitrogen homeostatic circuitry
Descriptor: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*GP*GP*AP*AP*TP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator TnrA
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4R25
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BU of 4r25 by Molmil
Structure of B. subtilis GlnK
Descriptor: Nitrogen regulatory PII-like protein, ZINC ION
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5193 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4RX6
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BU of 4rx6 by Molmil
Structure of B. subtilis GlnK-ATP complex to 2.6 Angstrom
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Nitrogen regulatory PII-like protein
Authors:Schumacher, M.A, Cuthbert, B, Tonthat, N, Chinnam, N.G, Whitfill, T.
Deposit date:2014-12-09
Release date:2015-12-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5994 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4S0R
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BU of 4s0r by Molmil
Structure of GS-TnrA complex
Descriptor: GLUTAMINE, Glutamine synthetase, MAGNESIUM ION, ...
Authors:Schumacher, M.A, Chinnam, N.G, Cuthbert, B, Tonthat, N.K.
Deposit date:2015-01-04
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4RS7
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BU of 4rs7 by Molmil
Structure of pNOB8 ParB-C
Descriptor: ParB-C
Authors:Schumacher, M.A, Lee, J, Chinnam, N.B, Barilla, D.
Deposit date:2014-11-07
Release date:2015-09-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science, 349, 2015
4RS8
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BU of 4rs8 by Molmil
Apo structure of novel pNOB8 plasmid centromere binding protein
Descriptor: AspA
Authors:Schumacher, M.A, Lee, J, Chinnam, N.B, Barilla, D.
Deposit date:2014-11-07
Release date:2015-09-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science, 349, 2015
4YG1
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BU of 4yg1 by Molmil
HipB-O1-O2 complex/P21212 crystal form
Descriptor: Antitoxin HipB, DNA (48-MER)
Authors:Schumacher, M.A.
Deposit date:2015-02-25
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
4YG4
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BU of 4yg4 by Molmil
HipB-O1-O1* complex
Descriptor: Antitoxin HipB, DNA (28-MER), DNA (5'-D(*AP*TP*AP*TP*CP*CP*CP*CP*TP*TP*AP*AP*GP*GP*GP*GP*AP*TP*AP*A)-3')
Authors:Schumacher, M.A.
Deposit date:2015-02-25
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
4YG7
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BU of 4yg7 by Molmil
Structure of FL autorepression promoter complex
Descriptor: Antitoxin HipB, DNA (50-MER), Serine/threonine-protein kinase HipA
Authors:Schumacher, M.A.
Deposit date:2015-02-25
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.77 Å)
Cite:HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
1ZX4
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BU of 1zx4 by Molmil
Structure of ParB bound to DNA
Descriptor: CITRIC ACID, Plasmid Partition par B protein, parS-small DNA centromere site
Authors:Schumacher, M.A, Funnell, B.E.
Deposit date:2005-06-06
Release date:2005-11-29
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Structures of ParB bound to DNA reveal mechanism of partition complex formation.
Nature, 438, 2005
1ZVV
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BU of 1zvv by Molmil
Crystal structure of a ccpa-crh-dna complex
Descriptor: DNA recognition strand CRE, Glucose-resistance amylase regulator, HPr-like protein crh, ...
Authors:Schumacher, M.A, Brennan, R.G, Hillen, W, Seidel, G.
Deposit date:2005-06-02
Release date:2006-02-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Phosphoprotein Crh-Ser46-P displays altered binding to CcpA to effect carbon catabolite regulation.
J.Biol.Chem., 281, 2006
6ALX
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BU of 6alx by Molmil
Structure of F. tularensis MglA-SspA solved in the presence of polyP
Descriptor: Macrophage growth locus A, Stringent starvation protein A
Authors:Schumacher, M.A.
Deposit date:2017-08-08
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Dissection of the molecular circuitry controlling virulence in Francisella tularensis.
Genes Dev., 31, 2017
6AMK
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BU of 6amk by Molmil
Structure of Streptomyces venezuelae BldC-whiI opt complex
Descriptor: DNA (5'-D(*AP*AP*TP*GP*TP*CP*CP*GP*AP*AP*TP*TP*AP*CP*CP*CP*GP*AP*AP*TP*TP*G)-3'), DNA (5'-D(*TP*TP*CP*AP*AP*TP*TP*CP*GP*GP*GP*TP*AP*AP*TP*TP*CP*GP*GP*GP*CP*A)-3'), Putative DNA-binding protein
Authors:Schumacher, M.A.
Deposit date:2017-08-09
Release date:2018-03-28
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (3.288 Å)
Cite:The MerR-like protein BldC binds DNA direct repeats as cooperative multimers to regulate Streptomyces development.
Nat Commun, 9, 2018
6AMA
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BU of 6ama by Molmil
Structure of S. coelicolor/S. venezuelae BldC-smeA-ssfA complex to 3.09 Angstrom
Descriptor: DNA (99-MER), Putative DNA-binding protein
Authors:Schumacher, M.A.
Deposit date:2017-08-09
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:The MerR-like protein BldC binds DNA direct repeats as cooperative multimers to regulate Streptomyces development.
Nat Commun, 9, 2018
6CG8
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BU of 6cg8 by Molmil
Structure of C. crescentus GapR-DNA
Descriptor: DNA (5'-D(*TP*TP*AP*AP*AP*AP*TP*TP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*AP*AP*TP*TP*TP*TP*AP*A)-3'), UPF0335 protein B7Z12_12435
Authors:Schumacher, M.A.
Deposit date:2018-02-19
Release date:2018-09-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:A Bacterial Chromosome Structuring Protein Binds Overtwisted DNA to Stimulate Type II Topoisomerases and Enable DNA Replication.
Cell, 175, 2018
6BYJ
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BU of 6byj by Molmil
Structure of human 14-3-3 gamma bound to O-GlcNAc peptide
Descriptor: 14-3-3 protein gamma, 2-acetamido-2-deoxy-beta-D-glucopyranose, TSTTATPPVSQASSTTTSTW O-GlcNac peptide
Authors:Schumacher, M.A.
Deposit date:2017-12-20
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.
Proc.Natl.Acad.Sci.USA, 115, 2018
6CFX
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BU of 6cfx by Molmil
Bosea sp GapR solved in the presence of DNA
Descriptor: PHOSPHATE ION, UPF0335 protein ASE63_04290
Authors:Schumacher, M.A.
Deposit date:2018-02-18
Release date:2018-09-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Bacterial Chromosome Structuring Protein Binds Overtwisted DNA to Stimulate Type II Topoisomerases and Enable DNA Replication.
Cell, 175, 2018
6BYL
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BU of 6byl by Molmil
Structure of 14-3-3 gamma bound to O-GlcNAcylated thr peptide
Descriptor: 14-3-3 protein gamma, 2-acetamido-2-deoxy-beta-D-glucopyranose, TSASTTVPVTTATTTTTSTW O-GlcNac peptide
Authors:Schumacher, M.A.
Deposit date:2017-12-20
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.
Proc.Natl.Acad.Sci.USA, 115, 2018
6BYK
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BU of 6byk by Molmil
Structure of 14-3-3 beta/alpha bound to O-ClcNAc peptide
Descriptor: 14-3-3 protein beta/alpha, 2-acetamido-2-deoxy-beta-D-glucopyranose, ATPPVSQASSTT O-GlcNac peptide
Authors:Schumacher, M.A.
Deposit date:2017-12-20
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.
Proc.Natl.Acad.Sci.USA, 115, 2018

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