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PDB: 98 results

4ZGN
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BU of 4zgn by Molmil
Structure Cdc123 complexed with the C-terminal domain of eIF2gamma
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division cycle protein 123, Eukaryotic translation initiation factor 2 subunit gamma, ...
Authors:Panvert, M, Dubiez, E, Arnold, L, Perez, J, Seufert, W, Mechulam, Y, Schmitt, E.
Deposit date:2015-04-23
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Cdc123, a Cell Cycle Regulator Needed for eIF2 Assembly, Is an ATP-Grasp Protein with Unique Features.
Structure, 23, 2015
4ZGP
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BU of 4zgp by Molmil
Structure of Cdc123 from Schizosaccharomyces pombe
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division cycle protein 123
Authors:Panvert, M, Dubiez, E, Arnold, L, Perez, J, Seufert, W, Mechulam, Y, Schmitt, E.
Deposit date:2015-04-23
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Cdc123, a Cell Cycle Regulator Needed for eIF2 Assembly, Is an ATP-Grasp Protein with Unique Features.
Structure, 23, 2015
4ZGO
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BU of 4zgo by Molmil
Structure of C-terminally truncated Cdc123 from Schizosaccharomyces pombe
Descriptor: Cell division cycle protein 123
Authors:Panvert, M, Dubiez, E, Arnold, L, Perez, J, Seufert, W, Mechulam, Y, Schmitt, E.
Deposit date:2015-04-23
Release date:2015-09-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.063 Å)
Cite:Cdc123, a Cell Cycle Regulator Needed for eIF2 Assembly, Is an ATP-Grasp Protein with Unique Features.
Structure, 23, 2015
1XTY
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BU of 1xty by Molmil
Crystal structure of Sulfolobus solfataricus peptidyl-tRNA hydrolase
Descriptor: Peptidyl-tRNA hydrolase, SULFATE ION
Authors:Fromant, M, Schmitt, E, Mechulam, Y, Lazennec, C, Plateau, P, Blanquet, S.
Deposit date:2004-10-25
Release date:2005-03-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure at 1.8 A resolution and identification of active site residues of Sulfolobus solfataricus peptidyl-tRNA hydrolase.
Biochemistry, 44, 2005
2MS9
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BU of 2ms9 by Molmil
Solution structure of a G-quadruplex
Descriptor: DNA (28-MER)
Authors:Chung, W.J, Heddi, B, Schmitt, E, Lim, K.W, Mechulam, Y, Phan, A.T.
Deposit date:2014-07-25
Release date:2015-02-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of a left-handed DNA G-quadruplex
Proc.Natl.Acad.Sci.USA, 2015
3CW5
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BU of 3cw5 by Molmil
E. coli Initiator tRNA
Descriptor: Initiator tRNA
Authors:Barraud, P, Schmitt, E, Mechulam, Y, Dardel, F, Tisne, C.
Deposit date:2008-04-21
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A unique conformation of the anticodon stem-loop is associated with the capacity of tRNAfMet to initiate protein synthesis.
Nucleic Acids Res., 36, 2008
4Q24
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BU of 4q24 by Molmil
Crystal structure of Cyclo(L-leucyl-L-phenylalanyl) synthase
Descriptor: Cyclo(L-leucyl-L-phenylalanyl) synthase, PHENYLMETHYL N-[(2S)-4-CHLORO-3-OXO-1-PHENYL-BUTAN-2-YL]CARBAMATE
Authors:Moutiez, M, Schmitt, E, Seguin, J, Thai, R, Favry, E, Mechulam, Y, Gondry, M.
Deposit date:2014-04-07
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Unravelling the mechanism of non-ribosomal peptide synthesis by cyclodipeptide synthases.
Nat Commun, 5, 2014
4RCZ
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BU of 4rcz by Molmil
Structure of aIF2-gamma D19A variant from Sulfolobus solfataricus bound to GDPNP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Dubiez, E, Aleksandrov, A, Lazennec-Schurdevin, C, Mechulam, Y, Schmitt, E.
Deposit date:2014-09-18
Release date:2015-05-27
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.429 Å)
Cite:Identification of a second GTP-bound magnesium ion in archaeal initiation factor 2.
Nucleic Acids Res., 43, 2015
4RD6
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Structure of aIF2-gamma from Sulfolobus solfataricus bound to GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Translation initiation factor 2 subunit gamma
Authors:Dubiez, E, Aleksandrov, A, Lazennec-Schurdevin, C, Mechulam, Y, Schmitt, E.
Deposit date:2014-09-18
Release date:2015-07-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.944 Å)
Cite:Identification of a second GTP-bound magnesium ion in archaeal initiation factor 2.
Nucleic Acids Res., 43, 2015
4RD1
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BU of 4rd1 by Molmil
Structure of aIF2-gamma H97A variant from Sulfolobus solfataricus bound to GTP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Dubiez, E, Aleksandrov, A, Lazennec-Schurdevin, C, Mechulam, Y, Schmitt, E.
Deposit date:2014-09-18
Release date:2015-05-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Identification of a second GTP-bound magnesium ion in archaeal initiation factor 2.
Nucleic Acids Res., 43, 2015
4RD3
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BU of 4rd3 by Molmil
Structure of aIF2-gamma H97A variant from Sulfolobus solfataricus bound to GDP and Pi
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Dubiez, E, Aleksandrov, A, Lazennec-Schurdevin, C, Mechulam, Y, Schmitt, E.
Deposit date:2014-09-18
Release date:2015-05-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Identification of a second GTP-bound magnesium ion in archaeal initiation factor 2.
Nucleic Acids Res., 43, 2015
6JCE
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BU of 6jce by Molmil
NMR solution and X-ray crystal structures of a DNA containing both right-and left-handed parallel-stranded G-quadruplexes
Descriptor: 29-mer DNA
Authors:Winnerdy, F.R, Bakalar, B, Maity, A, Vandana, J.J, Mechulam, Y, Schmitt, E, Phan, A.T.
Deposit date:2019-01-28
Release date:2019-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes.
Nucleic Acids Res., 47, 2019
3CW6
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BU of 3cw6 by Molmil
E. coli Initiator tRNA
Descriptor: Initiator tRNA
Authors:Barraud, P, Schmitt, E, Mechulam, Y, Dardel, F, Tisne, C.
Deposit date:2008-04-21
Release date:2008-09-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A unique conformation of the anticodon stem-loop is associated with the capacity of tRNAfMet to initiate protein synthesis.
Nucleic Acids Res., 36, 2008
7ZHG
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BU of 7zhg by Molmil
High-resolution cryo-EM structure of Pyrococcus abyssi 30S ribosomal subunit bound to mRNA and initiator tRNA anticodon stem-loop
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Kazan, R, Bourgeois, G, Mechulam, Y, Coureux, P.D, Schmitt, E.
Deposit date:2022-04-06
Release date:2022-06-29
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.25 Å)
Cite:Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
7ZKI
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BU of 7zki by Molmil
Cryo-EM structure of aIF1A:aIF5B:Met-tRNAiMet complex from a Pyrococcus abyssi 30S initiation complex
Descriptor: MAGNESIUM ION, METHIONINE, Met-tRNAiMet, ...
Authors:Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R.
Deposit date:2022-04-13
Release date:2022-07-20
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
6Y4B
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BU of 6y4b by Molmil
Structure of cyclodipeptide synthase from Candidatus Glomeribacter gigasporarum bound to Phe-tRNAPhe
Descriptor: Cyclodipeptide synthase, PHENYLALANINE, RNA (77-MER)
Authors:Bourgeois, G, Mechulam, Y, Schmitt, E.
Deposit date:2020-02-20
Release date:2020-12-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (5 Å)
Cite:Structural basis of the interaction between cyclodipeptide synthases and aminoacylated tRNA substrates.
Rna, 26, 2020
6Y3G
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BU of 6y3g by Molmil
Crystal structure of phenylalanine tRNA from Escherichia coli
Descriptor: CALCIUM ION, GLYCEROL, GUANIDINE, ...
Authors:Bourgeois, G, Mechulam, Y, Schmitt, E.
Deposit date:2020-02-18
Release date:2020-12-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis of the interaction between cyclodipeptide synthases and aminoacylated tRNA substrates.
Rna, 26, 2020
6Q6R
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BU of 6q6r by Molmil
Recognition of different base tetrads by RHAU: X-ray crystal structure of G4 recognition motif bound to the 3-end tetrad of a DNA G-quadruplex
Descriptor: ATP-dependent DNA/RNA helicase DHX36, POTASSIUM ION, Parallel stranded DNA G-quadruplex
Authors:Heddi, B, Cheong, V.V, Schmitt, E, Mechulam, Y, Phan, A.T.
Deposit date:2018-12-11
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Recognition of different base tetrads by RHAU (DHX36): X-ray crystal structure of the G4 recognition motif bound to the 3'-end tetrad of a DNA G-quadruplex.
J.Struct.Biol., 209, 2020
6QJO
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BU of 6qjo by Molmil
DNA containing both right- and left-handed parallel-stranded G-quadruplexes
Descriptor: DNA (28-MER), POTASSIUM ION
Authors:Winnerdy, F.R, Bakalar, B, Maity, A, Vandana, J.J, Schmitt, E, Mechulam, Y, Phan, A.T.
Deposit date:2019-01-24
Release date:2019-07-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes.
Nucleic Acids Res., 47, 2019
1MKH
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BU of 1mkh by Molmil
C-terminal domain of methionyl-tRNA synthetase from Pyrococcus abyssi
Descriptor: C-terminal domain of Methionyl-tRNA synthetase
Authors:Crepin, T, Schmitt, E, Blanquet, S, Mechulam, Y.
Deposit date:2002-08-29
Release date:2003-02-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure and function of the C-terminal domain of methionyl-tRNA synthetase
Biochemistry, 41, 2002
3M4X
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BU of 3m4x by Molmil
Structure of a ribosomal methyltransferase
Descriptor: NOL1/NOP2/sun family protein
Authors:Galimand, M, Schmitt, E, Panvert, M, Mechulam, Y, Courvalin, P.
Deposit date:2010-03-12
Release date:2010-04-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of an RNA methyltransferase
To be Published
2QMU
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BU of 2qmu by Molmil
Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states
Descriptor: GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, Translation initiation factor 2 alpha subunit, ...
Authors:Yatime, L, Mechulam, Y, Blanquet, S, Schmitt, E.
Deposit date:2007-07-17
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2QN6
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BU of 2qn6 by Molmil
Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Translation initiation factor 2 alpha subunit, ...
Authors:Mechulam, Y, Yatime, L, Blanquet, S, Schmitt, E.
Deposit date:2007-07-18
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states.
Proc.Natl.Acad.Sci.Usa, 104, 2007
5MLQ
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BU of 5mlq by Molmil
Structure of CDPS from Nocardia brasiliensis
Descriptor: CDPS, CITRIC ACID
Authors:Bourgeois, G, Seguin, J, Moutiez, M, Babin, M, Belin, P, Mechulam, Y, Gondry, M, Schmitt, E.
Deposit date:2016-12-07
Release date:2018-05-02
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Structural basis for partition of the cyclodipeptide synthases into two subfamilies.
J.Struct.Biol., 203, 2018
5MLP
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BU of 5mlp by Molmil
Structure of CDPS from Rickettsiella grylli
Descriptor: Uncharacterized protein
Authors:Bourgeois, G, Seguin, J, Moutiez, M, Babin, M, Belin, P, Mechulam, Y, Gondry, M, Schmitt, E.
Deposit date:2016-12-07
Release date:2018-05-02
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural basis for partition of the cyclodipeptide synthases into two subfamilies.
J.Struct.Biol., 203, 2018

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