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PDB: 111 件

3OU0
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re-refined 3CS0
分子名称: Periplasmic serine endoprotease DegP, heptapeptide, pentapeptide
著者Sauer, R.T, Grant, R.A, Kim, S.
登録日2010-09-14
公開日2011-01-19
最終更新日2012-02-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Covalent Linkage of Distinct Substrate Degrons Controls Assembly and Disassembly of DegP Proteolytic Cages.
Cell(Cambridge,Mass.), 145, 2011
4RQZ
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BU of 4rqz by Molmil
re-refinement of 1soz, Crystal Structure of DegS protease in complex with an activating peptide
分子名称: Protease degS, activating peptide
著者Sauer, R.T, Grant, R.A.
登録日2014-11-05
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4RR0
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re-refined 1vcw, CRYSTAL STRUCTURE OF DEGS AFTER BACKSOAKING THE ACTIVATING PEPTIDE
分子名称: Protease degS
著者Sauer, R.T, Grant, R.A.
登録日2014-11-05
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.054 Å)
主引用文献A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4RQY
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RE-REFINED STRUCTURE OF 1TE0 - STRUCTURAL ANALYSIS of DEGS, A STRESS SENSOR OF THE BACTERIAL PERIPLASM
分子名称: PHOSPHATE ION, Protease degS
著者Sauer, R.T, Grant, R.A.
登録日2014-11-05
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.204 Å)
主引用文献A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4RR1
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BU of 4rr1 by Molmil
re-refinement of entry 1sot, Crystal Structure of the DegS stress sensor
分子名称: NICKEL (II) ION, PHOSPHATE ION, Protease degS
著者Sauer, R.T, Grant, R.A.
登録日2014-11-05
公開日2015-03-11
最終更新日2015-03-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
8ET3
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BU of 8et3 by Molmil
Cryo-EM structure of a delivery complex containing the SspB adaptor, an ssrA-tagged substrate, and the AAA+ ClpXP protease
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
著者Ghanbarpour, A, Fei, X, Davis, J.H, Sauer, R.T.
登録日2022-10-16
公開日2023-01-25
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献The SspB adaptor drives structural changes in the AAA+ ClpXP protease during ssrA-tagged substrate delivery.
Proc.Natl.Acad.Sci.USA, 120, 2023
3LGT
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BU of 3lgt by Molmil
Y162A/H198P double mutant of DegS-deltaPDZ protease
分子名称: Protease degS
著者Sohn, J, Grant, R.A, Sauer, R.T.
登録日2010-01-21
公開日2010-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution.
J.Biol.Chem., 285, 2010
3LH3
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BU of 3lh3 by Molmil
DFP modified DegS delta PDZ
分子名称: Protease degS
著者Sohn, J, Grant, R.A, Sauer, R.T.
登録日2010-01-21
公開日2010-08-25
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution.
J.Biol.Chem., 285, 2010
6WRF
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BU of 6wrf by Molmil
ClpX-ClpP complex bound to GFP-ssrA, recognition complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
著者Fei, X, Sauer, R.T.
登録日2020-04-29
公開日2020-11-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structural basis of ClpXP recognition and unfolding of ssrA-tagged substrates.
Elife, 9, 2020
6WSG
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BU of 6wsg by Molmil
ClpX-ClpP complex bound to ssrA-tagged GFP, intermediate complex
分子名称: ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, Green fluorescent protein, ...
著者Fei, X, Sauer, R.T.
登録日2020-04-30
公開日2020-11-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structural basis of ClpXP recognition and unfolding of ssrA-tagged substrates.
Elife, 9, 2020
6BQC
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BU of 6bqc by Molmil
Cyclopropane fatty acid synthase from E. coli
分子名称: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE, CARBONATE ION, Cyclopropane-fatty-acyl-phospholipid synthase, ...
著者Hari, S.B, Grant, R.A, Sauer, R.T.
登録日2017-11-27
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.073 Å)
主引用文献Structural and Functional Analysis of E. coli Cyclopropane Fatty Acid Synthase.
Structure, 26, 2018
2HDD
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BU of 2hdd by Molmil
ENGRAILED HOMEODOMAIN Q50K VARIANT DNA COMPLEX
分子名称: DNA (5'-D(*AP*TP*CP*CP*GP*GP*GP*GP*AP*TP*TP*AP*CP*AP*TP*GP*G P*CP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*CP*CP*C P*CP*GP*GP*A)-3'), PROTEIN (ENGRAILED HOMEODOMAIN Q50K)
著者Tucker-Kellogg, L, Rould, M.A, Chambers, K.A, Ades, S.E, Sauer, R.T, Pabo, C.O.
登録日1998-02-10
公開日1998-05-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Engrailed (Gln50-->Lys) homeodomain-DNA complex at 1.9 A resolution: structural basis for enhanced affinity and altered specificity.
Structure, 5, 1997
5TXR
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BU of 5txr by Molmil
Structure of ALAS from S. cerevisiae non-covalently bound to PLP cofactor
分子名称: 5-aminolevulinate synthase, mitochondrial, FORMIC ACID, ...
著者Brown, B.L, Grant, R.A, Kardon, J.R, Sauer, R.T, Baker, T.A.
登録日2016-11-17
公開日2018-03-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the Mitochondrial Aminolevulinic Acid Synthase, a Key Heme Biosynthetic Enzyme.
Structure, 26, 2018
5TXT
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Structure of asymmetric apo/holo ALAS dimer from S. cerevisiae
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, 5-aminolevulinate synthase, mitochondrial, ...
著者Brown, B.L, Grant, R.A, Kardon, J.R, Sauer, R.T, Baker, T.A.
登録日2016-11-17
公開日2018-03-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the Mitochondrial Aminolevulinic Acid Synthase, a Key Heme Biosynthetic Enzyme.
Structure, 26, 2018
5TXV
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HslU P21 cell with 4 hexamers
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent protease ATPase subunit HslU
著者Grant, R.A, Chen, J, Glynn, S.E, Sauer, R.T.
登録日2016-11-17
公開日2017-03-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (7.086 Å)
主引用文献Covalently linked HslU hexamers support a probabilistic mechanism that links ATP hydrolysis to protein unfolding and translocation.
J. Biol. Chem., 292, 2017
7UIY
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BU of 7uiy by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIIa
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-10-26
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIW
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BU of 7uiw by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIb
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UJ0
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BU of 7uj0 by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIIb
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIZ
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BU of 7uiz by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIc
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIX
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BU of 7uix by Molmil
ClpAP complex bound to ClpS N-terminal extension, class I
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIV
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BU of 7uiv by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIa
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7M1M
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BU of 7m1m by Molmil
Crystal structure of Pseudomonas aeruginosa ClpP1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ATP-dependent Clp protease proteolytic subunit
著者Mawla, G.D, Grant, R.A, Baker, T.A, Sauer, R.T.
登録日2021-03-13
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献ClpP1P2 peptidase activity promotes biofilm formation in Pseudomonas aeruginosa.
Mol.Microbiol., 115, 2021
7M1L
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BU of 7m1l by Molmil
Crystal structure of Pseudomonas aeruginosa ClpP2
分子名称: ATP-dependent Clp protease proteolytic subunit, PHOSPHATE ION
著者Hall, B.M, Grant, R.A, Baker, T.A, Sauer, R.T.
登録日2021-03-13
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献ClpP1P2 peptidase activity promotes biofilm formation in Pseudomonas aeruginosa.
Mol.Microbiol., 115, 2021
6WR2
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BU of 6wr2 by Molmil
ClpP and ClpX IGF loop in ClpX-ClpP complex bound to ssrA tagged GFP
分子名称: ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit
著者Fei, X, Sauer, R.T.
登録日2020-04-29
公開日2020-11-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Structural basis of ClpXP recognition and unfolding of ssrA-tagged substrates.
Elife, 9, 2020
3B8J
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BU of 3b8j by Molmil
Q191A mutant of DegS-deltaPDZ
分子名称: Protease degS
著者Grant, R.A, Sohn, J, Sauer, R.T.
登録日2007-11-01
公開日2008-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.507 Å)
主引用文献biochemical characterization of DegS-deltaPDZ q191A mutant
To be Published

223790

件を2024-08-14に公開中

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