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PDB: 29 results

4XD9
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BU of 4xd9 by Molmil
Structure of Rpf2-Rrs1 complex involved in ribosome biogenesis
Descriptor: Ribosome biogenesis protein (Rrs1), putative (AFU_orthologue AFUA_7G04430), Ribosome biogenesis protein, ...
Authors:Asano, N, Kato, K, Yao, M.
Deposit date:2014-12-19
Release date:2015-06-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and functional analysis of the Rpf2-Rrs1 complex in ribosome biogenesis.
Nucleic Acids Res., 43, 2015
6VW4
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BU of 6vw4 by Molmil
2.35 Angstrom structure of Caci_6494 from Catenulispora Acidiphila in complex with S-DNPA
Descriptor: Aromatic-ring-hydroxylating dioxygenase beta subunit, [(3S)-9-hydroxy-1-methyl-10-oxo-4,10-dihydro-3H-benzo[g]isochromen-3-yl]acetic acid
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-02-18
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural characterization of three noncanonical NTF2-like superfamily proteins: implications for polyketide biosynthesis.
Acta Crystallogr.,Sect.F, 76, 2020
6WEY
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BU of 6wey by Molmil
High-resolution structure of the SARS-CoV-2 NSP3 Macro X domain
Descriptor: Non-structural protein 3
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-04-03
Release date:2020-04-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Molecular Basis for ADP-Ribose Binding to the Mac1 Domain of SARS-CoV-2 nsp3.
Biochemistry, 59, 2020
6P35
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BU of 6p35 by Molmil
2.5 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with 2-keto arginine and NADP
Descriptor: 5-[(diaminomethylidene)amino]-2-oxopentanoic acid, GLYCEROL, Glyoxylate/hydroxypyruvate reductase A, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-05-22
Release date:2020-05-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:2.1 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
To Be Published
6P77
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BU of 6p77 by Molmil
2.5 Angstrom structure of Caci_6494 from Catenulispora Acidiphila
Descriptor: Aromatic-ring-hydroxylating dioxygenase beta subunit, GLYCEROL, TETRAETHYLENE GLYCOL, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-06-05
Release date:2020-06-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Structural characterization of three noncanonical NTF2-like superfamily proteins: implications for polyketide biosynthesis.
Acta Crystallogr.,Sect.F, 76, 2020
6XCT
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BU of 6xct by Molmil
Porcine pepsin in complex with amprenavir
Descriptor: Pepsin A, {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL-2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-06-09
Release date:2021-06-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Porcine pepsin in complex with amprenavir
To Be Published
6XCZ
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BU of 6xcz by Molmil
Porcine pepsin in complex with saquinavir
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, Pepsin A
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-06-09
Release date:2021-06-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Porcine pepsin in complex with saquinavir
To Be Published
6XCY
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BU of 6xcy by Molmil
Porcine pepsin in complex with ritonavir
Descriptor: Pepsin A, RITONAVIR
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-06-09
Release date:2021-06-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Porcine pepsin in complex with ritonavir
To Be Published
6XD2
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BU of 6xd2 by Molmil
Porcine pepsin in complex with darunavir
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Pepsin A
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-06-09
Release date:2021-06-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Porcine pepsin in complex with darunavir
To Be Published
6OVL
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BU of 6ovl by Molmil
2.1 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
Descriptor: GLYCEROL, GLYOXYLIC ACID, Glyoxylate/hydroxypyruvate reductase A, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-05-08
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:2.1 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
To Be Published
6OXN
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BU of 6oxn by Molmil
2.6 Angstrom structure of W45F/H46S Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
Descriptor: GLYCEROL, GLYOXYLIC ACID, Glyoxylate/hydroxypyruvate reductase A, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-05-13
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:2.1 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
To Be Published
6P7L
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BU of 6p7l by Molmil
1.8 Angstrom structure of Aln2 from Streptomyces sp. CM020
Descriptor: Aln2, GLYCEROL
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-06-06
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of three noncanonical NTF2-like superfamily proteins: implications for polyketide biosynthesis.
Acta Crystallogr.,Sect.F, 76, 2020
7JQI
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BU of 7jqi by Molmil
Structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with alpha-ketoglutarate and NADP+
Descriptor: 2-OXOGLUTARIC ACID, Glyoxylate/hydroxypyruvate reductase A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-08-11
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with alpha-ketoglutarate and NADP+
To Be Published
7JQH
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BU of 7jqh by Molmil
Structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with phosphate and NADP+
Descriptor: GLYCEROL, Glyoxylate/hydroxypyruvate reductase A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-08-11
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with phosphate and NADP+
To Be Published
7JQJ
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BU of 7jqj by Molmil
Structure of W45F Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with NADP+
Descriptor: Glyoxylate/hydroxypyruvate reductase A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-08-11
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of W45F Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with NADP+
To Be Published
7JME
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BU of 7jme by Molmil
Structure of the SARS-CoV-2 NSP3 Macro X domain in complex with cyclic AMP
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Non-structural protein 3
Authors:Vuksanovic, N, Melkonian, T.R, Silvaggi, N.R.
Deposit date:2020-07-31
Release date:2020-09-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of Drug-Like Ligands for the Mac1 Domain of SARS-CoV-2 Nsp3.
Slas Discov, 25, 2020
5BKA
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BU of 5bka by Molmil
2.1 Angstrom structure of ActVI-ORFA from Streptomyces Coelicolor
Descriptor: Hydroxylacyl-CoA dehydrogenase
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-06-02
Release date:2020-06-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural characterization of three noncanonical NTF2-like superfamily proteins: implications for polyketide biosynthesis.
Acta Crystallogr.,Sect.F, 76, 2020
2RO0
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BU of 2ro0 by Molmil
Solution structure of the knotted tudor domain of the yeast histone acetyltransferase, Esa1
Descriptor: Histone acetyltransferase ESA1
Authors:Shimojo, H, Sano, N, Moriwaki, Y, Okuda, M, Horikoshi, M, Nishimura, Y.
Deposit date:2008-03-01
Release date:2008-04-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Novel structural and functional mode of a knot essential for RNA binding activity of the Esa1 presumed chromodomain
J.Mol.Biol., 378, 2008
2RNZ
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BU of 2rnz by Molmil
Solution structure of the presumed chromodomain of the yeast histone acetyltransferase, Esa1
Descriptor: Histone acetyltransferase ESA1
Authors:Shimojo, H, Sano, N, Moriwaki, Y, Okuda, M, Horikoshi, M, Nishimura, Y.
Deposit date:2008-03-01
Release date:2008-04-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Novel structural and functional mode of a knot essential for RNA binding activity of the Esa1 presumed chromodomain
J.Mol.Biol., 378, 2008
3AAD
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BU of 3aad by Molmil
Structure of the histone chaperone CIA/ASF1-double bromodomain complex linking histone modifications and site-specific histone eviction
Descriptor: Histone chaperone ASF1A, SULFATE ION, Transcription initiation factor TFIID subunit 1
Authors:Akai, Y, Adachi, N, Hayashi, Y, Eitoku, M, Sano, N, Natsume, R, Kudo, N, Tanokura, M, Senda, T, Horikoshi, M.
Deposit date:2009-11-16
Release date:2010-04-28
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of the histone chaperone CIA/ASF1-double bromodomain complex linking histone modifications and site-specific histone eviction
Proc.Natl.Acad.Sci.USA, 107, 2010
5J54
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BU of 5j54 by Molmil
The Structure and Mechanism of NOV1, a Resveratrol-Cleaving Dioxygenase
Descriptor: Carotenoid oxygenase, FE (III) ION, OXYGEN MOLECULE, ...
Authors:McAndrew, R.P, Pereira, J.H, Sathitsuksanoh, N, Sale, K.L, Simmons, B.A, Adams, P.D.
Deposit date:2016-04-01
Release date:2016-11-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure and mechanism of NOV1, a resveratrol-cleaving dioxygenase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5J55
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BU of 5j55 by Molmil
The Structure and Mechanism of NOV1, a Resveratrol-Cleaving Dioxygenase
Descriptor: 4-hydroxy-3-methoxybenzaldehyde, Carotenoid oxygenase, FE (III) ION, ...
Authors:McAndrew, R.P, Pereira, J.H, Sathitsuksanoh, N, Sale, K.L, Simmons, B.A, Adams, P.D.
Deposit date:2016-04-01
Release date:2016-11-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and mechanism of NOV1, a resveratrol-cleaving dioxygenase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5J53
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BU of 5j53 by Molmil
The Structure and Mechanism of NOV1, a Resveratrol-Cleaving Dioxygenase
Descriptor: Carotenoid oxygenase, FE (III) ION, OXYGEN MOLECULE, ...
Authors:McAndrew, R.P, Pereira, J.H, Sathitsuksanoh, N, Sale, K.L, Simmons, B.A, Adams, P.D.
Deposit date:2016-04-01
Release date:2016-11-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structure and mechanism of NOV1, a resveratrol-cleaving dioxygenase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5GIW
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BU of 5giw by Molmil
Solution NMR structure of Humanin containing a D-isomerized serine residue
Descriptor: Humanin
Authors:Furuita, K, Sugiki, T, Alsanousi, N, Fujiwara, T, Kojima, C.
Deposit date:2016-06-25
Release date:2016-07-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution NMR structure and inhibitory effect against amyloid-beta fibrillation of Humanin containing a d-isomerized serine residue
Biochem.Biophys.Res.Commun., 477, 2016
2JI1
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BU of 2ji1 by Molmil
X-ray structure of wild-type superoxide reductase from Desulfoarculus baarsii
Descriptor: CALCIUM ION, Desulfoferrodoxin, FE (II) ION, ...
Authors:Katona, G, Carpentier, P, Niviere, V, Amara, P, Adam, V, Ohana, J, Tsanov, N, Bourgeois, D.
Deposit date:2007-02-24
Release date:2007-05-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Raman-assisted crystallography reveals end-on peroxide intermediates in a nonheme iron enzyme.
Science, 316, 2007

 

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