2JI1

X-ray structure of wild-type superoxide reductase from Desulfoarculus baarsii

Summary for 2JI1

Related1VZG 1VZH 1VZI 2JI2 2JI3
DescriptorDesulfoferrodoxin, FE (III) ION, CALCIUM ION, ... (5 entities in total)
Functional Keywordsoxidoreductase, raman spectroscopy, superoxide reductase, intermediate trapping, microspectrophotometry, detoxification, electron transport, iron, transport, redox states, metal-binding
Biological sourceDesulfarculus baarsii
Total number of polymer chains4
Total molecular weight57312.66
Authors
Katona, G.,Carpentier, P.,Niviere, V.,Amara, P.,Adam, V.,Ohana, J.,Tsanov, N.,Bourgeois, D. (deposition date: 2007-02-24, release date: 2007-05-01, Last modification date: 2019-05-08)
Primary citation
Katona, G.,Carpentier, P.,Niviere, V.,Amara, P.,Adam, V.,Ohana, J.,Tsanov, N.,Bourgeois, D.
Raman-assisted crystallography reveals end-on peroxide intermediates in a nonheme iron enzyme.
Science, 316:449-453, 2007
PubMed: 17446401 (PDB entries with the same primary citation)
DOI: 10.1126/science.1138885
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.7 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.22340 0.7% 4.8%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2ji1
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Molmil generated image of 2ji1
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Molmil generated image of 2ji1
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More Biological unit images

Molmil generated image of 2ji1
no rotation
Molmil generated image of 2ji1
rotated about x axis by 90°
Molmil generated image of 2ji1
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (2ji1.pdb2.gz [49.59 KB])
Coordinate files for Biological unit (2ji1.pdb1.gz [50.72 KB])