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PDB: 63 results

6JBP
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BU of 6jbp by Molmil
Structure of MP-4 from Mucuna pruriens at 2.22 Angstroms
Descriptor: Kunitz-type trypsin inhibitor-like 2 protein
Authors:Jain, A, Shikhi, M, Kumar, A, Kumar, A, Nair, D.T, Salunke, D.M.
Deposit date:2019-01-26
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.217 Å)
Cite:The structure of MP-4 from Mucuna pruriens at 2.22 angstrom resolution.
Acta Crystallogr.,Sect.F, 76, 2020
5I4F
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BU of 5i4f by Molmil
scFv 2D10 complexed with alpha 1,6 mannobiose
Descriptor: alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose, scFv 2D10
Authors:Vashisht, S, Kumar, A, Kaur, K.J, Salunke, D.M.
Deposit date:2016-02-12
Release date:2016-12-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.549 Å)
Cite:Antibodies Can Exploit Molecular Crowding to Bind New Antigens at Noncanonical Paratope Positions
CHEMISTRYSELECT, 1, 2016
1IIZ
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BU of 1iiz by Molmil
Crystal Structure of the Induced Antibacterial Protein from Tasar Silkworm, Antheraea mylitta
Descriptor: LYSOZYME
Authors:Jain, D, Nair, D.T, Swaminathan, G.J, Abraham, E.G, Nagaraju, J, Salunke, D.M.
Deposit date:2001-04-24
Release date:2001-12-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the induced antibacterial protein from tasar silkworm, Antheraea mylitta. Implications to molecular evolution.
J.Biol.Chem., 276, 2001
3LP9
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BU of 3lp9 by Molmil
Crystal structure of LS24, A Seed Albumin from Lathyrus sativus
Descriptor: CALCIUM ION, CHLORIDE ION, LS-24, ...
Authors:Gaur, V, Qureshi, I.A, Singh, A, Chanana, V, Salunke, D.M.
Deposit date:2010-02-05
Release date:2010-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and functional insights of hemopexin fold protein from grass pea
Plant Physiol., 152, 2010
8JSB
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BU of 8jsb by Molmil
Antibody scFv against the Matrix protein 2 of influenza virus
Descriptor: single chain variable fragment
Authors:Kumar, U, Gaur, V, Salunke, D.M.
Deposit date:2023-06-19
Release date:2024-05-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Antibody scFv against the Matrix protein 2 of influenza virus
To Be Published
7YUE
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BU of 7yue by Molmil
Epitope-directed anti-SARS CoV 2 scFv engineered against the key spike protein region.
Descriptor: Single chain variable Fragment, Spike protein S2
Authors:Kumar, U, Jaiswal, D, Gaur, V, Salunke, D.M.
Deposit date:2022-08-17
Release date:2023-02-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Epitope-directed anti-SARS-CoV-2 scFv engineered against the key spike protein region could block membrane fusion.
Protein Sci., 32, 2023
8IA6
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BU of 8ia6 by Molmil
Crystal structure of scFv antibody against Phospholipase A2 of Echis carinatus venom
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, scFv antibody
Authors:Kumar, A, Madni, Z.K, Salunke, D.M.
Deposit date:2023-02-07
Release date:2024-02-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of scFv antibody against Phospholipase A2 of Echis carinatus venom
To Be Published
5YJS
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BU of 5yjs by Molmil
Structure of vicilin from Capsicum annuum
Descriptor: 2-HYDROXYBENZOIC ACID, CHLORIDE ION, COPPER (I) ION, ...
Authors:Shikhi, M, Nair, D.T, Salunke, D.M.
Deposit date:2017-10-11
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structure-guided identification of function: role ofCapsicum annuumvicilin during oxidative stress.
Biochem. J., 475, 2018
5CAD
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BU of 5cad by Molmil
Crystal structure of the vicilin from Solanum melongena revealed existence of different anionic ligands in structurally similar pockets
Descriptor: ACETATE ION, MAGNESIUM ION, PYROGLUTAMIC ACID, ...
Authors:Jain, A, Kumar, A, Salunke, D.M.
Deposit date:2015-06-29
Release date:2016-04-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structure of the vicilin from Solanum melongena reveals existence of different anionic ligands in structurally similar pockets
Sci Rep, 6, 2016
5DSS
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BU of 5dss by Molmil
MP-4 contributes to snake venom neutralization by Mucuna pruriens seeds through stimulation of cross-reactive antibodies
Descriptor: MP-4
Authors:Kumar, A, Nair, D.T, Salunke, D.M.
Deposit date:2015-09-17
Release date:2016-03-30
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:MP-4 Contributes to Snake Venom Neutralization by Mucuna pruriens Seeds through an Indirect Antibody-mediated Mechanism.
J.Biol.Chem., 291, 2016
7W9A
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BU of 7w9a by Molmil
Dynamics of lipid displacement inside the hydrophobic cavity of a non-specific lipid transfer protein from Solanum melongena
Descriptor: LAURIC ACID, Non-specific lipid-transfer protein
Authors:Madni, Z.K, Kumar, A, Salunke, D.M.
Deposit date:2021-12-09
Release date:2022-07-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Dynamics of lipid displacement inside the hydrophobic cavity of a nonspecific lipid transfer protein from Solanum melongena .
J.Biomol.Struct.Dyn., 41, 2023
6L4C
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BU of 6l4c by Molmil
Crystal structure of vicilin from Corylus avellana (Hazelnut)
Descriptor: 48-kDa glycoprotein, COPPER (II) ION
Authors:Shikhi, M, Salunke, D.M.
Deposit date:2019-10-16
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.191 Å)
Cite:Comparative study of 7S globulin from Corylus avellana and Solanum lycopersicum revealed importance of salicylic acid and Cu-binding loop in modulating their function.
Biochem.Biophys.Res.Commun., 522, 2020
6L4M
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BU of 6l4m by Molmil
Crystal structure of vicilin from Solanum lycopersicum (tomato)
Descriptor: 2-HYDROXYBENZOIC ACID, Vicilin
Authors:Jain, A, Salunke, D.M.
Deposit date:2019-10-18
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.302 Å)
Cite:Comparative study of 7S globulin from Corylus avellana and Solanum lycopersicum revealed importance of salicylic acid and Cu-binding loop in modulating their function.
Biochem.Biophys.Res.Commun., 522, 2020
8H73
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BU of 8h73 by Molmil
Crystal structure of antibody scFv against M2e Influenza peptide
Descriptor: CITRATE ANION, Single Chain Variable Fragment
Authors:Kumar, U, Madni, Z.K, Gaur, V, Salunke, D.M.
Deposit date:2022-10-18
Release date:2023-08-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:A structure and knowledge-based combinatorial approach to engineering universal scFv antibodies against influenza M2 protein.
J.Biomed.Sci., 30, 2023
8H3B
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BU of 8h3b by Molmil
Crystal structure of antibody scFv against M2e Influenza peptide
Descriptor: GLYCEROL, Single Chain Variable Fragment
Authors:Kumar, U, Madni, Z.K, Gaur, V, Salunke, D.M.
Deposit date:2022-10-08
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A structure and knowledge-based combinatorial approach to engineering universal scFv antibodies against influenza M2 protein.
J.Biomed.Sci., 30, 2023
8H3C
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BU of 8h3c by Molmil
Crystal structure of M2e Influenza peptide in complex with antibody scFv
Descriptor: Matrix protein 2, Single Chain Variable Fragment
Authors:Kumar, U, Madni, Z.K, Gaur, V, Salunke, D.M.
Deposit date:2022-10-08
Release date:2023-08-02
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:A structure and knowledge-based combinatorial approach to engineering universal scFv antibodies against influenza M2 protein.
J.Biomed.Sci., 30, 2023
2Y07
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BU of 2y07 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE ANTI-(4-HYDROXY-3-NITROPHENYL) - ACETYL MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3 FAB FRAGMENT IN COMPLEX WITH A PHAGE DISPLAY DERIVED DODECAPEPTIDE PPYPAWHAPGNI
Descriptor: ANTI-NP MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3, HEAVY CHAIN, LIGHT CHAIN, ...
Authors:Khan, T, Salunke, D.M.
Deposit date:2010-11-30
Release date:2011-12-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Elucidation of the Mechanistic Basis of Degeneracy in the Primary Humoral Response.
J.Immunol., 188, 2012
2XZQ
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BU of 2xzq by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE ANTI-(4-HYDROXY-3-NITROPHENYL)- ACETYL MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3 FAB FRAGMENT IN COMPLEX WITH A PHAGE DISPLAY DERIVED DODECAPEPTIDE YQLRPNAETLRF
Descriptor: ANTI-NP MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3, HEAVY CHAIN, LIGHT CHAIN, ...
Authors:Khan, T, Salunke, D.M.
Deposit date:2010-12-01
Release date:2011-12-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Elucidation of the Mechanistic Basis of Degeneracy in the Primary Humoral Response.
J.Immunol., 188, 2012
2Y36
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BU of 2y36 by Molmil
Crystal structure analysis of the anti-(4-hydroxy-3-nitrophenyl)- acetyl murine germline antibody BBE6.12H3 Fab fragment in complex with a phage display derived dodecapeptide DLWTTAIPTIPS
Descriptor: ANTI-NP MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3, DODECAPEPTIDE (DLWTTAIPTIPS)
Authors:Khan, T, Salunke, D.M.
Deposit date:2010-12-18
Release date:2011-12-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Elucidation of the Mechanistic Basis of Degeneracy in the Primary Humoral Response.
J.Immunol., 188, 2012
3EHK
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BU of 3ehk by Molmil
Crystal structure of Pru du amandin, an allergenic protein from prunus dulcis
Descriptor: Prunin
Authors:Gaur, V, Salunke, D.M.
Deposit date:2008-09-13
Release date:2009-09-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of Pru du amandin, an allergenic protein from prunus dulcis
To be published
5TVI
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BU of 5tvi by Molmil
Crystal structure of non-specific lipid transfer protein reveals non-canonical lipid binding: possible relevance in modulating allergenicity
Descriptor: GLYCEROL, MYRISTIC ACID, non specific lipid transfer protein, ...
Authors:Jain, A, Salunke, D.M.
Deposit date:2016-11-09
Release date:2017-07-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure of nonspecific lipid transfer protein from Solanum melongena
Proteins, 85, 2017
6IWO
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BU of 6iwo by Molmil
Structural insight into probable lipid transfer mechanism of non-specific lipid transfer protein via intermediate structures in Solanum melongena
Descriptor: GLYCEROL, MYRISTIC ACID, Non-specific lipid-transfer protein, ...
Authors:Madni, Z.K, Salunke, D.M.
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural insights into the lipid transfer mechanism of a non-specific lipid transfer protein.
Plant J., 102, 2020
6IX1
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BU of 6ix1 by Molmil
Structure of 2S albumin seed protein from Dolichos
Descriptor: 2S Albumin protein, SULFATE ION
Authors:Sharma, S.C, Kumar, A, Salunke, D.M.
Deposit date:2018-12-08
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:High resolution structural and functional analysis of a hemopexin motif protein from Dolichos.
Sci Rep, 9, 2019
6IWM
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BU of 6iwm by Molmil
Structural insight into probable lipid transfer mechanism of non-specific lipid transfer protein via intermediate structures in Solanum melongena
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Non-specific lipid-transfer protein, ...
Authors:Madni, Z.K, Salunke, D.M.
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural insights into the lipid transfer mechanism of a non-specific lipid transfer protein.
Plant J., 102, 2020
6IWP
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BU of 6iwp by Molmil
Structural insight into probable lipid transfer mechanism of non-specific lipid transfer protein via intermediate structures in Solanum melongena
Descriptor: MYRISTIC ACID, Non-specific lipid-transfer protein
Authors:Madni, Z.K, Salunke, D.M.
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into the lipid transfer mechanism of a non-specific lipid transfer protein.
Plant J., 102, 2020

 

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