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PDB: 43 results

4CET
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BU of 4cet by Molmil
Crystal structure of the complex of the P187S variant of human NAD(P) H:quinone oxidoreductase with dicoumarol at 2.2 A resolution
Descriptor: BISHYDROXY[2H-1-BENZOPYRAN-2-ONE,1,2-BENZOPYRONE], FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H DEHYDROGENASE [QUINONE] 1
Authors:Lienhart, W.D, Gudipati, V, Uhl, M.K, Binter, A, Pulido, S, Saf, R, Zangger, K, Gruber, K, Macheroux, P.
Deposit date:2013-11-12
Release date:2014-08-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Collapse of the Native Structure by a Single Amino Acid Exchange in Human Nad(P)H:Quinone Oxidoreductase (Nqo1).
FEBS J., 281, 2014
4CF6
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BU of 4cf6 by Molmil
Crystal structure of the complex of the P187S variant of human NAD(P) H:quinone oxidoreductase with Cibacron blue at 2.7 A resolution
Descriptor: CIBACRON BLUE, FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H DEHYDROGENASE [QUINONE] 1
Authors:Lienhart, W.D, Gudipati, V, Uhl, M.K, Binter, A, Pulido, S, Saf, R, Zangger, K, Gruber, K, Macheroux, P.
Deposit date:2013-11-13
Release date:2014-08-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.694 Å)
Cite:Collapse of the Native Structure by a Single Amino Acid Exchange in Human Nad(P)H:Quinone Oxidoreductase (Nqo1).
FEBS J., 281, 2014
5J3W
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BU of 5j3w by Molmil
Crystal structures reveal signaling states of a short blue light photoreceptor protein PpSB1-LOV (dark state)
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2016-03-31
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Signaling States of a Short Blue-Light Photoreceptor Protein PpSB1-LOV Revealed from Crystal Structures and Solution NMR Spectroscopy.
J.Mol.Biol., 428, 2016
2A66
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BU of 2a66 by Molmil
Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter
Descriptor: 5'-D(*CP*TP*GP*GP*CP*CP*TP*TP*GP*AP*AP*C)-3', 5'-D(*GP*TP*TP*CP*AP*AP*GP*GP*CP*CP*AP*G)-3', ACETATE ION, ...
Authors:Solomon, I.H, Hager, J.M, Safi, R, McDonnell, D.P, Redinbo, M.R, Ortlund, E.A.
Deposit date:2005-07-01
Release date:2005-12-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the Human LRH-1 DBD-DNA Complex Reveals Ftz-F1 Domain Positioning is Required for Receptor Activity.
J.Mol.Biol., 354, 2005
4ZRG
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BU of 4zrg by Molmil
Visual arrestin mutant - R175E
Descriptor: CARBON DIOXIDE, S-arrestin
Authors:Granzin, J, Stadler, A, Cousin, A, Schlesinger, R, Batra-Safferling, R.
Deposit date:2015-05-12
Release date:2015-11-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural evidence for the role of polar core residue Arg175 in arrestin activation.
Sci Rep, 5, 2015
6I8W
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BU of 6i8w by Molmil
Crystal structure of a membrane phospholipase A, a novel bacterial virulence factor
Descriptor: Alpha/beta fold hydrolase, CARBON DIOXIDE, ISOPROPYL ALCOHOL, ...
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2018-11-21
Release date:2019-11-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural, mechanistic, and physiological insights into phospholipase A-mediated membrane phospholipid degradation in Pseudomonas aeruginosa.
Elife, 11, 2022
7R4S
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BU of 7r4s by Molmil
Crystal structure of PpSB1-LOV-I48T mutant (dark state)
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2022-02-09
Release date:2022-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Residue alterations within a conserved hydrophobic pocket influence light, oxygen, voltage photoreceptor dark recovery.
Photochem Photobiol Sci, 22, 2023
7R56
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BU of 7r56 by Molmil
Crystal structure of PpSB1-LOV-I48T mutant (light state)
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2022-02-10
Release date:2022-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Residue alterations within a conserved hydrophobic pocket influence light, oxygen, voltage photoreceptor dark recovery.
Photochem Photobiol Sci, 22, 2023
7R5N
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BU of 7r5n by Molmil
Crystal structure of the full-length short LOV protein PF5-LOV from Pseudomonas fluorescens (dark state)
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Arinkin, V, Batra-Safferling, R, Granzin, J.
Deposit date:2022-02-11
Release date:2023-08-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Conserved Signal Transduction Mechanisms and Dark Recovery Kinetic Tuning in the Pseudomonadaceae Short Light, Oxygen, Voltage (LOV) Protein Family.
J.Mol.Biol., 2024
6BWU
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BU of 6bwu by Molmil
Crystal structure of carboxyhemoglobin in complex with beta Cys93 modifying agent, TD3
Descriptor: 1H-1,2,3-triazole-5-thiol, CARBON MONOXIDE, Hemoglobin subunit alpha, ...
Authors:Musayev, F.N, Safo, R.M, Safo, M.K.
Deposit date:2017-12-15
Release date:2018-01-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Triazole Disulfide Compound Increases the Affinity of Hemoglobin for Oxygen and Reduces the Sickling of Human Sickle Cells.
Mol. Pharm., 15, 2018
6BWP
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BU of 6bwp by Molmil
Crystal structure of Deoxy Hemoglobin in complex with beta Cys93 modifying agent, TD3
Descriptor: 1H-1,2,3-triazole-5-thiol, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Musayev, F.N, Safo, R.M, Safo, M.K.
Deposit date:2017-12-15
Release date:2018-01-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Triazole Disulfide Compound Increases the Affinity of Hemoglobin for Oxygen and Reduces the Sickling of Human Sickle Cells.
Mol. Pharm., 15, 2018
3R5I
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BU of 3r5i by Molmil
Crystal structure of liganded Hemoglobin complexed with a potent Antisickling agent, INN-312
Descriptor: 5-methoxy-2-(pyridin-3-ylmethoxy)benzaldehyde, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Safo, M.K, Musayev, F.N, Safo, R.P, Daniels, D, Eseonu, D.N, Parra, J.
Deposit date:2011-03-18
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and in Vitro Chracterization of Pyridyl Derivatives of Benzaldehydes : Highly Potent Antisickling Agents
To be Published
5J4E
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BU of 5j4e by Molmil
Crystal structures reveal signaling states of a short blue light photoreceptor protein PpSB1-LOV (Photoexcited state)
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2016-04-01
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Signaling States of a Short Blue-Light Photoreceptor Protein PpSB1-LOV Revealed from Crystal Structures and Solution NMR Spectroscopy.
J.Mol.Biol., 428, 2016
7A6P
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BU of 7a6p by Molmil
Structural determinants underlying the adduct lifetime in a short LOV protein PpSB2-LOV
Descriptor: DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, Putative Sensory box protein
Authors:Arinkin, V, Granzin, J, Batra-Safferling, R.
Deposit date:2020-08-26
Release date:2021-03-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural determinants underlying the adduct lifetime in the LOV proteins of Pseudomonas putida.
Febs J., 288, 2021
7ABY
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BU of 7aby by Molmil
Crystal structure of iLOV-Q489K mutant
Descriptor: ACETATE ION, FLAVIN MONONUCLEOTIDE, Phototropin-2
Authors:Granzin, J, Batra-Safferling, R.
Deposit date:2020-09-09
Release date:2021-04-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins.
J.Biol.Chem., 296, 2021
5LUV
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BU of 5luv by Molmil
Short LOV protein W619_1 in apo-state
Descriptor: CHLORIDE ION, Putative PAS/PAC sensor protein, SULFATE ION
Authors:Arinkin, V, Granzin, J, Batra-Safferling, R.
Deposit date:2016-09-12
Release date:2017-02-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a LOV protein in apo-state and implications for construction of LOV-based optical tools.
Sci Rep, 7, 2017
5LTL
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BU of 5ltl by Molmil
Structure of human chemokine CCL16
Descriptor: C-C motif chemokine 16, GLYCEROL, SODIUM ION
Authors:Weiergraeber, O.H, Batra-Safferling, R, Haenel, K, Willbold, D.
Deposit date:2016-09-07
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure and dynamics of human chemokine CCL16
To Be Published
3UGX
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BU of 3ugx by Molmil
Crystal Structure of Visual Arrestin
Descriptor: 1,2-ETHANEDIOL, IMIDAZOLE, PENTANEDIAL, ...
Authors:Batra-Safferling, R, Granzin, J.
Deposit date:2011-11-03
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.649 Å)
Cite:Crystal Structure of p44, a Constitutively Active Splice Variant of Visual Arrestin.
J.Mol.Biol., 416, 2012
6FXF
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BU of 6fxf by Molmil
Crystal structure of the SAM domain of murine SLy1
Descriptor: SAM and SH3 domain-containing protein 3
Authors:Kukuk, L.K, Granzin, J, Batra-Safferling, R, Koenig, B.W.
Deposit date:2018-03-09
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of the SLy1 SAM homodimer reveals a new interface for SAM domain self-association.
Sci Rep, 9, 2019
6GBV
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BU of 6gbv by Molmil
A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49T mutant
Descriptor: FLAVIN MONONUCLEOTIDE, PHOSPHATE ION, Putative blue-light photoreceptor
Authors:Granzin, J, Batra-Safferling, R, Roellen, K.
Deposit date:2018-04-16
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Mechanistic Basis of the Fast Dark Recovery of the Short LOV Protein DsLOV from Dinoroseobacter shibae.
Biochemistry, 57, 2018
6GBA
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BU of 6gba by Molmil
A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49A mutant
Descriptor: FLAVIN MONONUCLEOTIDE, Putative blue-light photoreceptor
Authors:Granzin, J, Batra-Safferling, R, Roellen, K.
Deposit date:2018-04-13
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanistic Basis of the Fast Dark Recovery of the Short LOV Protein DsLOV from Dinoroseobacter shibae.
Biochemistry, 57, 2018
6GG9
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BU of 6gg9 by Molmil
Crystal structures of a short blue light photoreceptor protein PpSB1-LOV mutant (dark state) - R61H/R66I
Descriptor: FLAVIN MONONUCLEOTIDE, Sensory box protein
Authors:Roellen, K, Granzin, J, Batra-Safferling, R.
Deposit date:2018-05-03
Release date:2018-07-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Small-angle X-ray scattering study of the kinetics of light-dark transition in a LOV protein.
PLoS ONE, 13, 2018
6GAY
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BU of 6gay by Molmil
A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49I mutant
Descriptor: FLAVIN MONONUCLEOTIDE, Putative blue-light photoreceptor, SULFATE ION
Authors:Granzin, J, Batra-Safferling, R, Roellen, K.
Deposit date:2018-04-13
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Mechanistic Basis of the Fast Dark Recovery of the Short LOV Protein DsLOV from Dinoroseobacter shibae.
Biochemistry, 57, 2018
6GB3
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BU of 6gb3 by Molmil
A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49S mutant
Descriptor: FLAVIN MONONUCLEOTIDE, Putative blue-light photoreceptor
Authors:Granzin, J, Batra-Safferling, R, Roellen, K.
Deposit date:2018-04-13
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Mechanistic Basis of the Fast Dark Recovery of the Short LOV Protein DsLOV from Dinoroseobacter shibae.
Biochemistry, 57, 2018
3UGU
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BU of 3ugu by Molmil
Crystal Structure of p44 (Splice Variant of Visual Arrestin)
Descriptor: S-arrestin
Authors:Batra-Safferling, R, Granzin, J.
Deposit date:2011-11-03
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of p44, a Constitutively Active Splice Variant of Visual Arrestin.
J.Mol.Biol., 416, 2012

 

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