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PDB: 2496 results

3SMD
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BU of 3smd by Molmil
Crystal structure of a mut/nudix family protein from bacillus thuringiensis
Descriptor: MutT/NUDIX family protein
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-06-27
Release date:2011-07-20
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of a mut/nudix family protein from bacillus thuringiensis
To be Published
3UQ5
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BU of 3uq5 by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant L240A F247L (L9A F16L) in the presence of 10 mM cysteamine
Descriptor: Gamma-aminobutyric-acid receptor subunit beta-1, SODIUM ION
Authors:Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
Deposit date:2011-11-19
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UK9
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BU of 3uk9 by Molmil
Galactose-specific lectin from Dolichos lablab
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Shetty, K.N, Latha, V.L, Rao, R.N, Nadimpalli, S.K, Suguna, K.
Deposit date:2011-11-09
Release date:2012-11-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Affinity of a galactose-specific legume lectin from Dolichos lablab to adenine revealed by X-ray cystallography.
Iubmb Life, 65, 2013
3UQ3
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BU of 3uq3 by Molmil
TPR2AB-domain:pHSP90-complex of yeast Sti1
Descriptor: Heat shock protein, Heat shock protein STI1
Authors:Schmid, A.B, Lagleder, S, Graewert, M.A, Roehl, A, Hagn, F, Wandinger, S.K, Cox, M.B, Demmer, O, Richter, K, Groll, M, Kessler, H, Buchner, J.
Deposit date:2011-11-19
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The architecture of functional modules in the Hsp90 co-chaperone Sti1/Hop.
Embo J., 31, 2012
3UL2
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BU of 3ul2 by Molmil
Galactose-specific lectin from Dolichos lablab in P6522 space group
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Shetty, K.N, Latha, V.L, Rao, R.N, Nadimpalli, S.K, Suguna, K.
Deposit date:2011-11-10
Release date:2012-11-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Affinity of a galactose-specific legume lectin from Dolichos lablab to adenine revealed by X-ray cystallography.
Iubmb Life, 65, 2013
3UPV
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BU of 3upv by Molmil
TPR2B-domain:pHsp70-complex of yeast Sti1
Descriptor: Heat shock protein SSA4, Heat shock protein STI1
Authors:Schmid, A.B, Lagleder, S, Graewert, M.A, Roehl, A, Hagn, F, Wandinger, S.K, Cox, M.B, Demmer, O, Richter, K, Groll, M, Kessler, H.
Deposit date:2011-11-18
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The architecture of functional modules in the Hsp90 co-chaperone Sti1/Hop.
Embo J., 31, 2012
3UQ7
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BU of 3uq7 by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant L240S F247L (L9S F16L) in presence of 10 mM cysteamine
Descriptor: Gamma-aminobutyric-acid receptor subunit beta-1
Authors:Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
Deposit date:2011-11-19
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
3V3V
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BU of 3v3v by Molmil
Structural and functional analysis of quercetagetin, a natural JNK1 inhibitor
Descriptor: 3,5,6,7-TETRAHYDROXY-2-(3,4-DIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, C-Jun-amino-terminal kinase-interacting protein 1, CHLORIDE ION, ...
Authors:Baek, S, Kang, N.J, Popowicz, G.M, Arciniega, M, Jung, S.K, Byun, S, Song, N.R, Heo, Y.S, Kim, B.Y, Lee, H.J, Holak, T.A, Augustin, M, Bode, A.M, Huber, R, Dong, Z, Lee, K.W.
Deposit date:2011-12-14
Release date:2012-12-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Functional Analysis of the Natural JNK1 Inhibitor Quercetagetin.
J.Mol.Biol., 425, 2013
3V8U
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BU of 3v8u by Molmil
The crystal structure of transferrin binding protein B (TbpB) from Neisseria meningitidis serogroup B
Descriptor: Transferrin binding-protein B
Authors:Noinaj, N, Easley, N, Buchanan, S.K.
Deposit date:2011-12-23
Release date:2012-02-15
Last modified:2012-04-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for iron piracy by pathogenic Neisseria.
Nature, 483, 2012
5OVA
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BU of 5ova by Molmil
Apo PDZ domain from rat Shank3
Descriptor: SH3 and multiple ankyrin repeat domains protein 3
Authors:Ponna, S.K, Myllykoski, M, Boeckers, T.M, Kursula, P.
Deposit date:2017-08-28
Release date:2018-03-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for PDZ domain interactions in the post-synaptic density scaffolding protein Shank3.
J. Neurochem., 145, 2018
6E5A
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BU of 6e5a by Molmil
PPARg in complex with compound 4b
Descriptor: (5Z)-5-({4-[(prop-2-yn-1-yl)oxy]phenyl}methylidene)-2-sulfanylidene-1,3-thiazolidin-4-one, Peroxisome proliferator-activated receptor gamma
Authors:Bruning, J.B, Chua, B.S.K.
Deposit date:2018-07-19
Release date:2019-03-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Shooting three inflammatory targets with a single bullet: Novel multi-targeting anti-inflammatory glitazones.
Eur J Med Chem, 167, 2019
5OVP
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BU of 5ovp by Molmil
PDZ domain from rat Shank3 bound to the C terminus of CIRL
Descriptor: Adhesion G protein-coupled receptor L1, SH3 and multiple ankyrin repeat domains protein 3
Authors:Ponna, S.K, Myllykoski, M, Boeckers, T.M, Kursula, P.
Deposit date:2017-08-29
Release date:2018-03-07
Last modified:2018-07-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for PDZ domain interactions in the post-synaptic density scaffolding protein Shank3.
J. Neurochem., 145, 2018
6S62
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BU of 6s62 by Molmil
Crystal structure of 2-methylcitrate dehydratase (PrpD) from Pseudomonas aeruginosa in apo form.
Descriptor: Propionate catabolic protein PrpD
Authors:Wijaya, A.J, Brear, P, Dolan, S.K, Welch, M.
Deposit date:2019-07-02
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal structure of 2-methylcitrate dehydratase (PrpD) from Pseudomonas aeruginosa in apo form.
To Be Published
6E6Y
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BU of 6e6y by Molmil
Dieckmann cyclase, NcmC
Descriptor: Dieckmann cyclase, NcmC, SULFATE ION
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-07-25
Release date:2019-07-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for Enzymatic Off-Loading of Hybrid Polyketides by Dieckmann Condensation.
Acs Chem.Biol., 2020
2JRV
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BU of 2jrv by Molmil
The third dimensional structure of mab198-bound pep.1 for autoimmune myasthenia gravis
Descriptor: PEPTIDE PEP.1
Authors:Jung, H.H, Yi, H.J, Lee, S.K, Lee, J.Y, Jung, H.J, Yang, S.T, Eu, Y.-J, Im, S.-H, Kim, J.I.
Deposit date:2007-06-29
Release date:2008-07-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural analysis of immunotherapeutic peptides for autoimmune Myasthenia gravis
Biochemistry, 46, 2007
6EC7
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BU of 6ec7 by Molmil
Glutamylation domain, TbtB, from thiomuracin biosynthesis
Descriptor: Lantibiotic dehydratase domain protein
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-08-07
Release date:2019-08-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
Proc.Natl.Acad.Sci.USA, 116, 2019
2JRW
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BU of 2jrw by Molmil
Solution structure of Cyclic extended Pep1(Cyc.ext.Pep.1) for autoimmune myasthenia gravis
Descriptor: Cyclic extended Pep.1
Authors:Jung, H.H, Yi, H.J, Lee, S.K, Lee, J.Y, Jung, H.J, Yang, S.T, Eu, Y.-J, Im, S.-H, Kim, J.I.
Deposit date:2007-06-29
Release date:2008-07-01
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structural analysis of immunotherapeutic peptides for autoimmune Myasthenia gravis
Biochemistry, 46, 2007
5OVC
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BU of 5ovc by Molmil
PDZ domain from rat Shank3 bound to the C terminus of GKAP
Descriptor: CHLORIDE ION, GKAP C terminus, synthetic peptide, ...
Authors:Ponna, S.K, Myllykoski, M, Boeckers, T.M, Kursula, P.
Deposit date:2017-08-28
Release date:2018-03-07
Last modified:2018-07-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for PDZ domain interactions in the post-synaptic density scaffolding protein Shank3.
J. Neurochem., 145, 2018
2JQ7
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BU of 2jq7 by Molmil
Model for thiostrepton binding to the ribosomal L11-RNA
Descriptor: 50S RIBOSOMAL PROTEIN L11, RIBOSOMAL RNA, THIOSTREPTON
Authors:Jonker, H.R.A, Ilin, S, Grimm, S.K, Woehnert, J, Schwalbe, H.
Deposit date:2007-05-30
Release date:2007-07-03
Last modified:2021-08-18
Method:SOLUTION NMR
Cite:L11 Domain Rearrangement Upon Binding to RNA and Thiostrepton Studied by NMR Spectroscopy
Nucleic Acids Res., 35, 2007
6E6U
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BU of 6e6u by Molmil
Variant C89S of Dieckmann cyclase, NcmC
Descriptor: Dieckmann cyclase, NcmC, SULFATE ION
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-07-25
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Basis for Enzymatic Off-Loading of Hybrid Polyketides by Dieckmann Condensation.
Acs Chem.Biol., 2020
6S6F
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BU of 6s6f by Molmil
Crystal structure of 2-methylcitrate synthase (PrpC) from Pseudomonas aeruginosa in apo form.
Descriptor: CHLORIDE ION, Citrate synthase, GLYCEROL
Authors:Wijaya, A.J, Brear, P, Dolan, S.K, Welch, M.
Deposit date:2019-07-03
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Crystal structure of 2-methylcitrate synthase (PrpC) from Pseudomonas aeruginosa in apo form.
To Be Published
6EC8
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BU of 6ec8 by Molmil
Glutamylation domain, TbtB, from thiomuracin biosynthesis bound to 5'-phosphodesmethylglutamycin
Descriptor: 3'-deoxy-3'-[(L-alpha-glutamyl)amino]adenosine 5'-(dihydrogen phosphate), Lantibiotic dehydratase domain protein
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-08-07
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
Proc.Natl.Acad.Sci.USA, 116, 2019
6LUN
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BU of 6lun by Molmil
NN2101 Antibody Fab fragment
Descriptor: NN2101
Authors:Kim, H.N, Seo, M.D, Park, S.K.
Deposit date:2020-01-30
Release date:2021-02-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Development and characterization of a fully human antibody targeting SCF/c-kit signaling.
Int.J.Biol.Macromol., 159, 2020
6M7W
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BU of 6m7w by Molmil
Role of the highly conserved G68 residue in the yeast phosphorelay protein Ypd1: implications for interactions between histidine phosphotransfer (HPt) and response regulator proteins
Descriptor: Phosphorelay intermediate protein YPD1
Authors:Menon, S.K, Soni, K.S, West, A.H.
Deposit date:2018-08-21
Release date:2019-02-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Role of the highly conserved G68 residue in the yeast phosphorelay protein Ypd1: implications for interactions between histidine phosphotransfer (HPt) and response regulator proteins.
BMC Biochem., 20, 2019
7SOM
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BU of 7som by Molmil
Ciliary C2 central pair apparatus isolated from Chlamydomonas reinhardtii
Descriptor: Cilia- and flagella-associated protein 20, FAP147, FAP178, ...
Authors:Gui, M, Wang, X, Dutcher, S.K, Brown, A, Zhang, R.
Deposit date:2021-11-01
Release date:2022-04-13
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Ciliary central apparatus structure reveals mechanisms of microtubule patterning.
Nat.Struct.Mol.Biol., 29, 2022

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