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PDB: 47 results

3ZDP
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R416A Monomeric nucleoprotein of influenza A virus
Descriptor: NUCLEOCAPSID PROTEIN, POTASSIUM ION
Authors:Chenavas, S, Ruigrok, R.W.H, Crepin, T.
Deposit date:2012-11-29
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Monomeric Nucleoprotein of Influenza a Virus.
Plos Pathog., 9, 2013
3PMK
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Crystal structure of the Vesicular Stomatitis Virus RNA free nucleoprotein/phosphoprotein complex
Descriptor: Nucleocapsid protein, Phosphoprotein
Authors:Leyrat, C, Yabukarski, F, Tarbouriech, N, Ruigrok, R.W.H, Jamin, M.
Deposit date:2010-11-17
Release date:2011-10-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Structure of the Vesicular Stomatitis Virus N0-P Complex
Plos Pathog., 7, 2011
5N2U
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Influenza D virus nucleoprotein
Descriptor: Nucleoprotein
Authors:Labaronne, A, Ruigrok, R.W.H, Crepin, T.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structure of the nucleoprotein of Influenza D shows that all Orthomyxoviridae nucleoproteins have a similar NPCORE, with or without a NPTAILfor nuclear transport.
Sci Rep, 9, 2019
3L32
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Structure of the dimerisation domain of the rabies virus phosphoprotein
Descriptor: Phosphoprotein
Authors:Ivanov, I, Crepin, T, Jamin, M, Ruigrok, R.W.H.
Deposit date:2009-12-16
Release date:2010-02-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the dimerisation domain of the rabies virus phosphoprotein
J.Virol., 2010
8FFR
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BU of 8ffr by Molmil
Revised structure of the rabies virus nucleoprotein-RNA complex
Descriptor: Nucleoprotein, PHOSPHATE ION, RNA (99-MER)
Authors:Leyrat, C, Bourhis, J.M, Albertini, A.A.V, Wernimont, A.K, Muziol, T, Ravelli, R.B.G, Weissenhorn, W, Ruigrok, R.W.H, Jamin, M.
Deposit date:2022-12-09
Release date:2023-01-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Structure and Dynamics of the Unassembled Nucleoprotein of Rabies Virus in Complex with Its Phosphoprotein Chaperone Module.
Viruses, 14, 2022
1VYI
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Structure of the c-terminal domain of the polymerase cofactor of rabies virus: insights in function and evolution.
Descriptor: GLYCEROL, RNA POLYMERASE ALPHA SUBUNIT
Authors:Mavrakis, M, McCarthy, A.A, Roche, S, Blondel, D, Ruigrok, R.W.H.
Deposit date:2004-04-30
Release date:2004-10-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and Function of the C-Terminal Domain of the Polymerase Cofactor of Rabies Virus
J.Mol.Biol., 343, 2004
2GTT
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BU of 2gtt by Molmil
Crystal structure of the rabies virus nucleoprotein-RNA complex
Descriptor: Nucleoprotein, PHOSPHATE ION, RNA (99-MER)
Authors:Albertini, A.A.V, Wernimont, A.K, Muziol, T, Ravelli, R.B.G, Weissenhorn, W, Ruigrok, R.W.H.
Deposit date:2006-04-28
Release date:2006-09-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Crystal Structure of the Rabies Virus Nucleoprotein-RNA Complex
Science, 313, 2006
1EZJ
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CRYSTAL STRUCTURE OF THE MULTIMERIZATION DOMAIN OF THE PHOSPHOPROTEIN FROM SENDAI VIRUS
Descriptor: CALCIUM ION, ETHYL MERCURY ION, NUCLEOCAPSID PHOSPHOPROTEIN
Authors:Tarbouriech, N, Curran, J, Ruigrok, R.W.H, Burmeister, W.P.
Deposit date:2000-05-11
Release date:2000-09-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tetrameric coiled coil domain of Sendai virus phosphoprotein.
Nat.Struct.Biol., 7, 2000
8PZQ
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Model for focused reconstruction of influenza A RNP-like particle
Descriptor: Nucleoprotein, RNA (5'P-(UC)6-FAM3')
Authors:Chenavier, F, Estrozi, L.F, Zarkadas, E, Ruigrok, R.W.H, Schoehn, G, Ballandras-Colas, A, Crepin, T.
Deposit date:2023-07-27
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Cryo-EM structure of influenza helical nucleocapsid reveals NP-NP and NP-RNA interactions as a model for the genome encapsidation.
Sci Adv, 9, 2023
8PZP
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Model for influenza A virus helical ribonucleoprotein-like structure
Descriptor: Nucleoprotein, RNA (5'P-(UC)6-FAM3')
Authors:Chenavier, F, Estrozi, L.F, Zarkadas, E, Ruigrok, R.W.H, Schoehn, G, Ballandras-Colas, A, Crepin, T.
Deposit date:2023-07-27
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (8.7 Å)
Cite:Cryo-EM structure of influenza helical nucleocapsid reveals NP-NP and NP-RNA interactions as a model for the genome encapsidation.
Sci Adv, 9, 2023
1R4G
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BU of 1r4g by Molmil
Solution structure of the Sendai virus protein X C-subdomain
Descriptor: RNA polymerase alpha subunit
Authors:Blanchard, L, Tarbouriech, N, Blackledge, M, Timmins, P, Burmeister, W.P, Ruigrok, R.W, Marion, D.
Deposit date:2003-10-06
Release date:2004-03-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and dynamics of the nucleocapsid-binding domain of the Sendai virus phosphoprotein in solution
Virology, 319, 2004
2VTW
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BU of 2vtw by Molmil
Structure of the C-terminal head domain of the fowl adenovirus type 1 short fibre
Descriptor: FIBER PROTEIN 2, GLYCEROL, SULFATE ION
Authors:ElBakkouri, M, Seiradake, E, Cusack, S, Ruigrok, R.W.H, Schoehn, G.
Deposit date:2008-05-16
Release date:2008-06-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the C-Terminal Head Domain of the Fowl Adenovirus Type 1 Short Fibre.
Virology, 378, 2008
8B8A
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BU of 8b8a by Molmil
Multimerization domain of borna disease virus 1 phosphoprotein
Descriptor: Phosphoprotein
Authors:Tarbouriech, N, Legrand, P, Bourhis, J.M, Chenavier, F, Freslon, L, Kawasaki, J, Horie, M, Tomonaga, K, Bachiri, K, Coyaud, E, Gonzalez-Dunia, D, Ruigrok, R.W.H, Crepin, T.
Deposit date:2022-10-04
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Borna Disease Virus 1 Phosphoprotein Forms a Tetramer and Interacts with Host Factors Involved in DNA Double-Strand Break Repair and mRNA Processing.
Viruses, 14, 2022
6XTE
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BU of 6xte by Molmil
Human karyopherin RanBP5 (isoform-1)
Descriptor: Antipain, CHLORIDE ION, Importin-5, ...
Authors:Swale, C, McCarthy, A.A, Ruigrok, R.W.H, Crepin, T.
Deposit date:2020-01-16
Release date:2020-04-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:X-ray Structure of the Human Karyopherin RanBP5, an Essential Factor for Influenza Polymerase Nuclear Trafficking.
J.Mol.Biol., 432, 2020
6XU2
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Human karyopherin RanBP5 (isoform-3)
Descriptor: Antipain, Importin-5, NICKEL (II) ION
Authors:Swale, C, McCarthy, A.A, Berger, I, Bieniossek, C, Delmas, B, Ruigrok, R.W.H, Crepin, T.
Deposit date:2020-01-17
Release date:2020-04-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.834 Å)
Cite:X-ray Structure of the Human Karyopherin RanBP5, an Essential Factor for Influenza Polymerase Nuclear Trafficking.
J.Mol.Biol., 432, 2020
4UFT
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Structure of the helical Measles virus nucleocapsid
Descriptor: 5'-R(*CP*CP*CP*CP*CP*CP)-3', NUCLEOPROTEIN
Authors:Gutsche, I, Desfosses, A, Effantin, G, Ling, W.L, Haupt, M, Ruigrok, R.W.H, Sachse, C, Schoehn, G.
Deposit date:2015-03-19
Release date:2015-04-29
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Near-Atomic Cryo-Em Structure of the Helical Measles Virus Nucleocapsid.
Science, 348, 2015
4V4U
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The quasi-atomic model of Human Adenovirus type 5 capsid
Descriptor: HEXON PROTEIN, N-TERMINAL PEPTIDE OF FIBER PROTEIN, PENTON PROTEIN
Authors:Fabry, C.M.S, Rosa-Calatrava, M, Conway, J.F, Zubieta, C, Cusack, S, Ruigrok, R.W.H, Schoehn, G.
Deposit date:2005-03-03
Release date:2014-07-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (10 Å)
Cite:A Quasi-Atomic Model of Human Adenovirus Type 5 Capsid.
Embo J., 24, 2005
2VQZ
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Structure of the cap-binding domain of influenza virus polymerase subunit PB2 with bound m7GTP
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, POLYMERASE BASIC PROTEIN 2
Authors:Guilligay, D, Tarendeau, F, Resa-Infante, P, Coloma, R, Crepin, T, Sehr, P, Lewis, J, Ruigrok, R.W.H, Ortin, J, Hart, D.J, Cusack, S.
Deposit date:2008-03-21
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Structural Basis for CAP Binding by Influenza Virus Polymerase Subunit Pb2.
Nat.Struct.Mol.Biol., 15, 2008
2C9F
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BU of 2c9f by Molmil
THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON DODECAHEDRON
Descriptor: FIBER, PENTON PROTEIN
Authors:Fuschiotti, P, Schoehn, G, Fender, P, Fabry, C.M.S, Hewat, E.A, Chroboczek, J, Ruigrok, R.W.H, Conway, J.F.
Deposit date:2005-12-12
Release date:2006-03-02
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (16.5 Å)
Cite:Structure of the Dodecahedral Penton Particle from Human Adenovirus Type 3.
J.Mol.Biol., 356, 2006
2C9G
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THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON BASE DODECAHEDRON
Descriptor: PENTON PROTEIN
Authors:Fuschiotti, P, Schoehn, G, Fender, P, Fabry, C.M.S, Hewat, E.A, Chroboczek, J, Ruigrok, R.W.H, Conway, J.F.
Deposit date:2005-12-12
Release date:2006-01-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9.3 Å)
Cite:Structure of the Dodecahedral Penton Particle from Human Adenovirus Type 3.
J.Mol.Biol., 356, 2006
1NSC
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BU of 1nsc by Molmil
INFLUENZA B VIRUS NEURAMINIDASE CAN SYNTHESIZE ITS OWN INHIBITOR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, N-acetyl-alpha-neuraminic acid, ...
Authors:Burmeister, W.P, Ruigrok, R.W.H, Cusack, S.
Deposit date:1993-05-24
Release date:1993-10-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Influenza B virus neuraminidase can synthesize its own inhibitor.
Structure, 1, 1993
1NSD
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INFLUENZA B VIRUS NEURAMINIDASE CAN SYNTHESIZE ITS OWN INHIBITOR
Descriptor: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Burmeister, W.P, Ruigrok, R.W.H, Cusack, S.
Deposit date:1993-05-24
Release date:1993-10-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Influenza B virus neuraminidase can synthesize its own inhibitor.
Structure, 1, 1993
1NSB
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THE 2.2 ANGSTROMS RESOLUTION CRYSTAL STRUCTURE OF INFLUENZA B NEURAMINIDASE AND ITS COMPLEX WITH SIALIC ACID
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, NEURAMINIDASE
Authors:Burmeister, W.P, Ruigrok, R.W.H, Cusack, S.
Deposit date:1991-08-08
Release date:1993-10-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The 2.2 A resolution crystal structure of influenza B neuraminidase and its complex with sialic acid.
EMBO J., 11, 1992
1T3E
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Structural basis of dynamic glycine receptor clustering
Descriptor: 49-mer fragment of Glycine receptor beta chain, Gephyrin, SULFATE ION
Authors:Sola, M, Bavro, V.N, Timmins, J, Franz, T, Ricard-Blum, S, Schoehn, G, Ruigrok, R.W.H, Paarmann, I, Saiyed, T, O'Sullivan, G.A.
Deposit date:2004-04-26
Release date:2004-07-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structural basis of dynamic glycine receptor clustering by gephyrin
Embo J., 23, 2004
2JDQ
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C-terminal domain of influenza A virus polymerase PB2 subunit in complex with human importin alpha5
Descriptor: IMPORTIN ALPHA-1 SUBUNIT, POLYMERASE BASIC PROTEIN 2
Authors:Tarendeau, F, Guilligay, D, Mas, P, Boulo, S, Baudin, F, Ruigrok, R.W.H, Hart, D.J, Cusack, S.
Deposit date:2007-01-11
Release date:2007-02-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Nuclear Import Function of the C- Terminal Domain of Influenza Virus Polymerase Pb2 Subunit
Nat.Struct.Mol.Biol., 14, 2007

 

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