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PDB: 66 results

2VUD
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PA-IIL lectin from pseudomonas aeruginosa complexed with fucose- derived glycomimetics
Descriptor: CALCIUM ION, FUCOSE-BINDING LECTIN PA-IIL, SULFATE ION, ...
Authors:Beha, S, Marotte, K, Sabin, C, Mitchell, E.P, Imberty, A, Roy, R.
Deposit date:2008-05-22
Release date:2009-07-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Fucose-Derived Glycomimetics as High Affinity Ligands for Bacterial Lectin Pa-Iil from Pseudomonas Aeruginosa
To be Published
2WR9
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CRYSTAL STRUCTURE OF BURKHOLDERIA CENOCEPACIA LECTIN (BCLA) COMPLEXED WITH AMAN1-3MAN DISACCHARIDE
Descriptor: CALCIUM ION, LECTIN, SULFATE ION, ...
Authors:Lameignere, E, Shiao, T.C, Roy, R, Wimmerova, M, Dubreuil, F, Varrot, A, Imberty, A.
Deposit date:2009-09-01
Release date:2009-09-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis of the Affinity for Oligomannosides and Analogs Displayed by Bc2L-A, a Burkholderia Cenocepacia Soluble Lectin.
Glycobiology, 20, 2010
2WRA
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BU of 2wra by Molmil
BclA lectin from Burkholderia cenocepacia complexed with aMan1(aMan1- 6)-3Man trisaccharide
Descriptor: CALCIUM ION, LECTIN, SULFATE ION, ...
Authors:Lameignere, E, Shiao, T.C, Roy, R, Wimmerova, M, Dubreuil, F, Varrot, A, Imberty, A.
Deposit date:2009-09-01
Release date:2009-09-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural Basis of the Affinity for Oligomannosides and Analogs Displayed by Bc2L-A, a Burkholderia Cenocepacia Soluble Lectin.
Glycobiology, 20, 2010
2MLP
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BU of 2mlp by Molmil
MICROCIN LEADER PEPTIDE FROM E. COLI, NMR, 25 STRUCTURES
Descriptor: MCBA PROPEPTIDE
Authors:Kim, S, Sinha Roy, R, Walsh, C.T, Baleja, J.D.
Deposit date:1998-01-21
Release date:1998-07-22
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Role of the microcin B17 propeptide in substrate recognition: solution structure and mutational analysis of McbA1-26.
Chem.Biol., 5, 1998
1B25
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BU of 1b25 by Molmil
FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE FROM PYROCOCCUS FURIOSUS
Descriptor: IRON/SULFUR CLUSTER, PROTEIN (FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE), TUNGSTOPTERIN
Authors:Hu, Y.L, Faham, S, Roy, R, Adams, M.W.W, Rees, D.C.
Deposit date:1998-12-04
Release date:1999-03-24
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Formaldehyde ferredoxin oxidoreductase from Pyrococcus furiosus: the 1.85 A resolution crystal structure and its mechanistic implications.
J.Mol.Biol., 286, 1999
1B4N
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BU of 1b4n by Molmil
FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE FROM PYROCOCCUS FURIOSUS, COMPLEXED WITH GLUTARATE
Descriptor: CALCIUM ION, FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE, GLUTARIC ACID, ...
Authors:Hu, Y.L, Faham, S, Roy, R, Adams, M.W.W, Rees, D.C.
Deposit date:1998-12-24
Release date:1999-05-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Formaldehyde ferredoxin oxidoreductase from Pyrococcus furiosus: the 1.85 A resolution crystal structure and its mechanistic implications.
J.Mol.Biol., 286, 1999
4O8L
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BU of 4o8l by Molmil
Structure of sortase A from Streptococcus pneumoniae
Descriptor: Sortase
Authors:Misra, A, Biswas, T, Das, S, Marathe, U, Roy, R.P, Ramakumar, S.
Deposit date:2013-12-28
Release date:2015-01-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of sortase A from Streptococcus pneumoniae
To be Published
5GO6
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Structure of sortase E T196V mutant from Streptomyces avermitilis
Descriptor: Putative secreted protein, SULFATE ION
Authors:Das, S, Pawale, V.S, Dadireddy, V, Roy, R.P, Ramakumar, S.
Deposit date:2016-07-26
Release date:2017-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of sortase E T196V mutant from Streptomyces avermitilis
To Be Published
5GO5
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BU of 5go5 by Molmil
Structure of sortase E from Streptomyces avermitilis
Descriptor: GLYCINE, SULFATE ION, sortase
Authors:Das, S, Pawale, V.S, Dadireddy, V, Roy, R.P, Ramakumar, S.
Deposit date:2016-07-26
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and specificity of a new class of Ca2+-independent housekeeping sortase from Streptomyces avermitilis provide insights into its non-canonical substrate preference.
J. Biol. Chem., 292, 2017
8U3M
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BU of 8u3m by Molmil
The FARFAR-MD-NMR ensemble of an HIV-1 TAR excited state
Descriptor: The excited state of HIV-1 transactivation response element (31-MER)
Authors:Geng, A, Ganser, L, Roy, R, Shi, H, Pratihar, S, Case, D.A, Al-Hashimi, H.M.
Deposit date:2023-09-07
Release date:2023-10-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An RNA excited conformational state at atomic resolution.
Nat Commun, 14, 2023
5HAU
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BU of 5hau by Molmil
Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Gagnon, M.G, Roy, R.N, Lomakin, I.B, Florin, T, Mankin, A.S, Steitz, T.A.
Deposit date:2015-12-30
Release date:2016-04-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of proline-rich peptides bound to the ribosome reveal a common mechanism of protein synthesis inhibition.
Nucleic Acids Res., 44, 2016
5HD1
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BU of 5hd1 by Molmil
Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Gagnon, M.G, Roy, R.N, Lomakin, I.B, Florin, T, Mankin, A.S, Steitz, T.A.
Deposit date:2016-01-04
Release date:2016-04-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of proline-rich peptides bound to the ribosome reveal a common mechanism of protein synthesis inhibition.
Nucleic Acids Res., 44, 2016
5HCP
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BU of 5hcp by Molmil
Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Gagnon, M.G, Roy, R.N, Lomakin, I.B, Florin, T, Mankin, A.S, Steitz, T.A.
Deposit date:2016-01-04
Release date:2016-04-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.894 Å)
Cite:Structures of proline-rich peptides bound to the ribosome reveal a common mechanism of protein synthesis inhibition.
Nucleic Acids Res., 44, 2016
5HCR
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BU of 5hcr by Molmil
Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Gagnon, M.G, Roy, R.N, Lomakin, I.B, Florin, T, Mankin, A.S, Steitz, T.A.
Deposit date:2016-01-04
Release date:2016-04-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of proline-rich peptides bound to the ribosome reveal a common mechanism of protein synthesis inhibition.
Nucleic Acids Res., 44, 2016
5HCQ
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BU of 5hcq by Molmil
Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Gagnon, M.G, Roy, R.N, Lomakin, I.B, Florin, T, Mankin, A.S, Steitz, T.A.
Deposit date:2016-01-04
Release date:2016-04-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Structures of proline-rich peptides bound to the ribosome reveal a common mechanism of protein synthesis inhibition.
Nucleic Acids Res., 44, 2016
2JDH
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BU of 2jdh by Molmil
Lectin PA-IIL of P.aeruginosa complexed with disaccharide derivative
Descriptor: 2H-1,2,3-TRIAZOL-4-YLMETHANOL, CALCIUM ION, FUCOSE-BINDING LECTIN PA-IIL, ...
Authors:Marotte, K, Sabin, C, Preville, C, Pymbock, M, Deguise, I, Wimmerova, M, Mitchell, E.P, Imberty, A, Roy, R.
Deposit date:2007-01-09
Release date:2007-07-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:X-Ray Structures and Thermodynamics of the Interaction of Pa-Iil from Pseudomonas Aeruginosa with Disaccharide Derivatives.
Chemmedchem, 2, 2007
2JDK
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BU of 2jdk by Molmil
Lectin PA-IIL of P.aeruginosa complexed with disaccharide derivative
Descriptor: CALCIUM ION, FUCOSE-BINDING LECTIN PA-IIL, METHYL 2H-1,2,3-TRIAZOLE-4-CARBOXYLATE, ...
Authors:Marotte, K, Sabin, C, Preville, C, Pymbock, M, Deguise, I, Wimmerova, M, Mitchell, E.P, Imberty, A, Roy, R.
Deposit date:2007-01-10
Release date:2007-07-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:X-Ray Structures and Thermodynamics of the Interaction of Pa-Iil from Pseudomonas Aeruginosa with Disaccharide Derivatives.
Chemmedchem, 2, 2007
4O8T
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BU of 4o8t by Molmil
Structure of sortase A C207A mutant from Streptococcus pneumoniae
Descriptor: GLYCEROL, Sortase
Authors:Misra, A, Biswas, T, Das, S, Marathe, U, Roy, R.P, Ramakumar, S.
Deposit date:2013-12-30
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structure of sortase A C207A mutant from Streptococcus pneumoniae
To be Published
4A6S
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BU of 4a6s by Molmil
Structure of the PAIL lectin from Pseudomonas aeruginosa in complex with 2-Naphtyl-1-thio-beta-D-galactopyranoside
Descriptor: CALCIUM ION, PA-I GALACTOPHILIC LECTIN, naphthalen-2-yl 1-thio-beta-D-galactopyranoside
Authors:Rodrigue, J, Ganne, G, Blanchard, B, Saucier, C, Giguere, D, Chiao, T.S, Varrot, A, Imberty, A, Roy, R.
Deposit date:2011-11-08
Release date:2012-10-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Aromatic Thioglycoside Inhibitors Against the Virulence Factor Leca from Pseudomonas Aeruginosa.
Org.Biomol.Chem., 11, 2013
4AV5
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BU of 4av5 by Molmil
Structure of a triclinic crystal of the FimH lectin domain in complex with a propynyl biphenyl alpha-D-mannoside, at 1.4 A resolution
Descriptor: (2R,3S,4S,5S,6S)-2-(hydroxymethyl)-6-[3-(4-phenylphenyl)prop-2-ynoxy]oxane-3,4,5-triol, FIMH, SULFATE ION
Authors:Wellens, A, Lahmann, M, Touaibia, M, Vaucher, J, Oscarson, S, Roy, R, Remaut, H, Bouckaert, J.
Deposit date:2012-05-23
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Tyrosine Gate as a Potential Entropic Lever in the Receptor-Binding Site of the Bacterial Adhesin Fimh.
Biochemistry, 51, 2012
4AVJ
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BU of 4avj by Molmil
Structure of the FimH lectin domain in the trigonal space group, in complex with a methanol triazol ethyl phenyl alpha-D-mannoside at 2.1 A resolution
Descriptor: FIMH, METHANOL TRIAZOL ETHYL PHENYL 1O-ALPHA-D-MANNOPYRANOSIDE, NICKEL (II) ION, ...
Authors:Wellens, A, Lahmann, M, Touaibia, M, Vaucher, J, Oscarson, S, Roy, R, Remaut, H, Bouckaert, J.
Deposit date:2012-05-26
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.105 Å)
Cite:The Tyrosine Gate as a Potential Entropic Lever in the Receptor-Binding Site of the Bacterial Adhesin Fimh.
Biochemistry, 51, 2012
4AUU
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Crystal structure of apo FimH lectin domain at 1.5 A resolution
Descriptor: 1,2-ETHANEDIOL, FIMH, NICKEL (II) ION, ...
Authors:Wellens, A, Lahmann, M, Touaibia, M, Vaucher, J, Oscarson, S, Roy, R, Remaut, H, Bouckaert, J.
Deposit date:2012-05-22
Release date:2012-06-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Tyrosine Gate as a Potential Entropic Lever in the Receptor-Binding Site of the Bacterial Adhesin Fimh.
Biochemistry, 51, 2012
4AV0
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BU of 4av0 by Molmil
Structure of the FimH lectin domain in the trigonal space group, in complex with a methoxy phenyl propynyl alpha-D-mannoside at 2.1 A resolution
Descriptor: 3-(4-methoxyphenyl)prop-2-yn-1-yl alpha-D-mannopyranoside, FIMH, NICKEL (II) ION, ...
Authors:Wellens, A, Lahmann, M, Touaibia, M, Vaucher, J, Oscarson, S, Roy, R, Remaut, H, Bouckaert, J.
Deposit date:2012-05-23
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:The Tyrosine Gate as a Potential Entropic Lever in the Receptor-Binding Site of the Bacterial Adhesin Fimh.
Biochemistry, 51, 2012
4AUJ
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FimH lectin domain co-crystal with a alpha-D-mannoside O-linked to para hydroxypropargyl phenyl
Descriptor: 4-(3-hydroxyprop-1-yn-1-yl)phenyl alpha-D-mannopyranoside, FIMH
Authors:Bouckaert, J, Touaibia, M, Roos, G, Shiao, T.C, Wang, Q, Papadopoulos, A, Roy, R.
Deposit date:2012-05-17
Release date:2013-05-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.527 Å)
Cite:Validation of Reactivity Descriptors to Assess the Aromatic Stacking within the Tyrosine Gate of Fimh.
Acs Med.Chem.Lett., 4, 2013
4AVK
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BU of 4avk by Molmil
Structure of trigonal FimH lectin domain crystal soaked with an alpha- D-mannoside O-linked to propynyl pyridine at 2.4A resolution
Descriptor: 3-(pyridin-3-yl)prop-2-yn-1-yl alpha-D-mannopyranoside, FIMH, NICKEL (II) ION, ...
Authors:Wellens, A, Lahmann, M, Touaibia, M, Vaucher, J, Oscarson, S, Roy, R, Remaut, H, Bouckaert, J.
Deposit date:2012-05-26
Release date:2012-06-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Tyrosine Gate as a Potential Entropic Lever in the Receptor-Binding Site of the Bacterial Adhesin Fimh.
Biochemistry, 51, 2012

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