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PDB: 32 results

5PGM
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SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE
Descriptor: ALANINE, PHOSPHOGLYCERATE MUTASE 1, SULFATE ION
Authors:Rigden, D.J, Phillips, S.E.V, Fothergill-Gilmore, L.A.
Deposit date:1998-08-19
Release date:1999-02-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Sulphate ions observed in the 2.12 A structure of a new crystal form of S. cerevisiae phosphoglycerate mutase provide insights into understanding the catalytic mechanism.
J.Mol.Biol., 286, 1999
1EBB
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Bacillus stearothermophilus YhfR
Descriptor: GLYCEROL, PHOSPHATASE, SULFATE ION
Authors:Rigden, D.J, Jedrzejas, M.J.
Deposit date:2001-07-24
Release date:2002-02-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Mechanism of Action of a Cofactor-Dependent Phosphoglycerate Mutase Homolog from Bacillus Stearothermophilus with Broad Specificity Phosphatase Activity.
J.Mol.Biol., 315, 2002
1BQ3
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SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE IN COMPLEX WITH INOSITOL HEXAKISPHOSPHATE
Descriptor: INOSITOL HEXAKISPHOSPHATE, PROTEIN (PHOSPHOGLYCERATE MUTASE 1), SULFATE ION
Authors:Rigden, D.J, Phillips, S.E.V, Fothergill-Gilmore, L.A.
Deposit date:1998-08-20
Release date:1998-08-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Polyanionic inhibitors of phosphoglycerate mutase: combined structural and biochemical analysis.
J.Mol.Biol., 289, 1999
1BQ4
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SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE IN COMPLEX WITH BENZENE HEXACARBOXYLATE
Descriptor: BENZENE HEXACARBOXYLIC ACID, PROTEIN (PHOSPHOGLYCERATE MUTASE 1), SULFATE ION
Authors:Rigden, D.J, Phillips, S.E.V, Fothergill-Gilmore, L.A.
Deposit date:1998-08-20
Release date:1998-08-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Polyanionic inhibitors of phosphoglycerate mutase: combined structural and biochemical analysis.
J.Mol.Biol., 289, 1999
1PKL
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THE STRUCTURE OF LEISHMANIA PYRUVATE KINASE
Descriptor: PROTEIN (PYRUVATE KINASE), SULFATE ION
Authors:Rigden, D.J, Phillips, S.E.V, Michels, P.A.M, Fothergill-Gilmore, L.A.
Deposit date:1998-09-15
Release date:1998-09-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structure of pyruvate kinase from Leishmania mexicana reveals details of the allosteric transition and unusual effector specificity.
J.Mol.Biol., 291, 1999
1H2E
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BACILLUS STEAROTHERMOPHILUS PHOE (previously known as yhfr) in complex with phosphate
Descriptor: 1,2-ETHANEDIOL, PHOSPHATASE, PHOSPHATE ION
Authors:Rigden, D.J, Littlejohn, J.E, Jedrzejas, M.J.
Deposit date:2002-08-08
Release date:2002-08-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structures of Phosphate and Trivanadate Complexes of Bacillus Stearothermophilus Phosphatase Phoe: Structural and Functional Analysis in the Cofactor-Dependent Phosphoglycerate Mutase Superfamily
J.Mol.Biol., 325, 2003
1H2F
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BACILLUS STEAROTHERMOPHILUS PHOE (previously known as yhfr) in complex with trivanadate
Descriptor: PHOSPHATASE, PHOSPHATE ION, TRIVANADATE
Authors:Rigden, D.J, Littlejohn, J.E, Jedrzejas, M.J.
Deposit date:2002-08-08
Release date:2002-08-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Phosphate and Trivanadate Complexes of Bacillus Stearothermophilus Phosphatase Phoe: Structural and Functional Analysis in the Cofactor-Dependent Phosphoglycerate Mutase Superfamily
J.Mol.Biol., 325, 2003
1W3Y
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Crystal structure of S. pneumoniae hyaluronate lyase in complex with palmitoyl-vitamin C
Descriptor: (2E,4R,5S)-2,3,4,5-TETRAHYDROXY-6-(PALMITOYLOXY)HEX-2-ENOIC ACID, HYALURONATE LYASE, SULFATE ION, ...
Authors:Rigden, D.J, Jedrzejas, M.J.
Deposit date:2004-07-21
Release date:2004-08-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:L-Ascorbic Acid 6-Hexadecanoate, a Potent Hyaluronidase Inhibitor: X-Ray Structure and Molecular Modeling of Enzyme-Inhibitor Complexes
J.Biol.Chem., 279, 2004
2BRV
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Crystal structure of Streptococcus Pneumoniae Hyaluronate Lyase from 70percent saturated malonate.
Descriptor: HYALURONATE LYASE, MALONIC ACID
Authors:Rigden, D.J, Jedrzejas, M.J.
Deposit date:2005-05-11
Release date:2006-04-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Alternate Structural Conformations of Streptococcus Pneumoniae Hyaluronan Lyase: Insights Into Enzyme Flexibility and Underlying Molecular Mechanism of Action.
J.Mol.Biol., 358, 2006
2BRW
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Crystal structure of Streptococcus Pneumoniae Hyaluronate Lyase from 30percent PEGMME.
Descriptor: HYALURONATE LYASE, SULFATE ION
Authors:Rigden, D.J, Littlejohn, J.E, Jedrzejas, M.J.
Deposit date:2005-05-11
Release date:2006-04-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Alternate Structural Conformations of Streptococcus Pneumoniae Hyaluronan Lyase: Insights Into Enzyme Flexibility and Underlying Molecular Mechanism of Action.
J.Mol.Biol., 358, 2006
1GMZ
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Crystal structure of the D49 phospholipase A2 piratoxin III from Bothrops pirajai.
Descriptor: ISOPROPYL ALCOHOL, PHOSPHOLIPASE A2
Authors:Rigden, D.J, Lee, W.H, Polikarpov, I.
Deposit date:2001-09-27
Release date:2001-11-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Structure of the D49 Phospholipase A2 Piratoxin III from Bothrops Pirajai Reveals Unprecedented Structural Displacement of the Calcium-Binding Loop: Possible Relationship to Cooperative Substrate Binding
Acta Crystallogr.,Sect.D, 59, 2003
2BRP
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Crystal structure of S. pneumoniae hyaluronate lyase in complex with W249b
Descriptor: D-xylose, HYALURONATE LYASE, SULFAMIC ACID 1-DECYL-2-(4-SULFAMOYLOXYPHENYL)-1H-INDOL-6-YL ESTER, ...
Authors:Rigden, D.J, Jedrzejas, M.J.
Deposit date:2005-05-10
Release date:2006-04-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design of new benzoxazole-2-thione-derived inhibitors of Streptococcus pneumoniae hyaluronan lyase: structure of a complex with a 2-phenylindole.
Glycobiology, 16, 2006
4PGM
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SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE
Descriptor: PHOSPHOGLYCERATE MUTASE 1
Authors:Rigden, D.J, Alexeev, D, Phillips, S.E.V, Fothergill-Gilmore, L.A.
Deposit date:1997-04-25
Release date:1997-10-29
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The 2.3 A X-ray crystal structure of S. cerevisiae phosphoglycerate mutase.
J.Mol.Biol., 276, 1998
1O99
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CRYSTAL STRUCTURE OF THE S62A MUTANT OF PHOSPHOGLYCERATE MUTASE FROM BACILLUS STEAROTHERMOPHILUS COMPLEXED WITH 2-PHOSPHOGLYCERATE
Descriptor: 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE, 2-PHOSPHOGLYCERIC ACID, MANGANESE (II) ION, ...
Authors:Rigden, D.J, Lamani, E, Littlejohn, J.E, Jedrzejas, M.J.
Deposit date:2002-12-11
Release date:2002-12-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Insights Into the Catalytic Mechanism of Cofactor-Independent Phosphoglycerate Mutase from X-Ray Crystallography, Simulated Dynamics and Molecular Modeling
J.Mol.Biol., 328, 2003
1O98
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1.4A CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE MUTASE FROM BACILLUS STEAROTHERMOPHILUS COMPLEXED WITH 2-PHOSPHOGLYCERATE
Descriptor: 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE, 2-PHOSPHOGLYCERIC ACID, MANGANESE (II) ION, ...
Authors:Rigden, D.J, Lamani, E, Littlejohn, J.E, Jedrzejas, M.J.
Deposit date:2002-12-11
Release date:2003-05-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Insights Into the Catalytic Mechanism of Cofactor-Independent Phosphoglycerate Mutase from X-Ray Crystallography, Simulated Dynamics and Molecular Modeling
J.Mol.Biol., 328, 2003
1OJN
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BU of 1ojn by Molmil
SPECIFICITY AND MECHANISM OF STREPTOCOCCUS PNEUMONIAE HYALURONATE LYASE: COMPLEX OF THE TYR408PHE MUTANT WITH 6-SULPHATED CHONDROITIN DISACCHARIDE
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-6-O-sulfo-beta-D-galactopyranose, HYALURONATE LYASE, SULFATE ION
Authors:Rigden, D.J, Jedrzejas, M.J.
Deposit date:2003-07-11
Release date:2003-10-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of Streptococcus Pneumoniae Hyaluronate Lyase in Complex with Chondroitin and Chondroitin Sulfate Disaccharides: Insights Into Specificity and Mechanism of Action
J.Biol.Chem., 278, 2003
1OJP
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SPECIFICITY AND MECHANISM OF STREPTOCOCCUS PNEUMONIAE HYALURONATE LYASE: COMPLEX WITH 6-SULPHATED CHONDROITIN DISACCHARIDE
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-6-O-sulfo-beta-D-galactopyranose, HYALURONATE LYASE, SULFATE ION
Authors:Rigden, D.J, Jedrzejas, M.J.
Deposit date:2003-07-11
Release date:2003-10-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of Streptococcus Pneumoniae Hyaluronate Lyase in Complex with Chondroitin and Chondroitin Sulfate Disaccharides: Insights Into Specificity and Mechanism of Action
J.Biol.Chem., 278, 2003
1OJM
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SPECIFICITY AND MECHANISM OF STREPTOCOCCUS PNEUMONIAE HYALURONATE LYASE: COMPLEX WITH UNSULPHATED CHONDROITIN DISACCHARIDE
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, HYALURONATE LYASE, SULFATE ION
Authors:Rigden, D.J, Jedrzejas, M.J.
Deposit date:2003-07-11
Release date:2003-10-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structures of Streptococcus Pneumoniae Hyaluronate Lyase in Complex with Chondroitin and Chondroitin Sulfate Disaccharides: Insights Into Specificity and Mechanism of Action
J.Biol.Chem., 278, 2003
1OJO
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SPECIFICITY AND MECHANISM OF STREPTOCOCCUS PNEUMONIAE HYALURONATE LYASE: COMPLEX OF THE TYR408PHE MUTANT WITH 4-SULPHATED CHONDROITIN DISACCHARIDE
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, HYALURONATE LYASE, SULFATE ION
Authors:Rigden, D.J, Jedrzejas, M.J.
Deposit date:2003-07-11
Release date:2003-10-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of Streptococcus Pneumoniae Hyaluronate Lyase in Complex with Chondroitin and Chondroitin Sulfate Disaccharides: Insights Into Specificity and Mechanism of Action
J.Biol.Chem., 278, 2003
7NIT
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BU of 7nit by Molmil
X-ray structure of a multidomain BbgIII from Bifidobacterium bifidum
Descriptor: Beta-galactosidase, CALCIUM ION, GLYCEROL, ...
Authors:Moroz, O.V, Blagova, E, Lebedev, A.A, Sanchez Rodriguez, F, Rigden, D.J, Tams, J.W, Wilting, R, Vester, J.K, Longhin, E, Krogh, K.B.R, Pache, R.A, Davies, G.J, Wilson, K.S.
Deposit date:2021-02-14
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Multitasking in the gut: the X-ray structure of the multidomain BbgIII from Bifidobacterium bifidum offers possible explanations for its alternative functions.
Acta Crystallogr D Struct Biol, 77, 2021
7M6C
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BU of 7m6c by Molmil
Crystal structure of PLA2 from snake venom of peruvian Bothrops atrox
Descriptor: Basic phospholipase A2, LAURIC ACID
Authors:Leonardo, D.A, Chojnowski, G, Simpkin, A, Seifert-Davila, W, Vivas-Ruiz, D.E, Keegan, R, Rigden, D.
Deposit date:2021-03-25
Release date:2022-01-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:findMySequence: a neural-network-based approach for identification of unknown proteins in X-ray crystallography and cryo-EM
Iucrj, 9, 2022
4A3P
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Structure of USP15 DUSP-UBL deletion mutant
Descriptor: ACETATE ION, IODIDE ION, UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15
Authors:Elliott, P.R, Liu, H, Pastok, M.W, Grossmann, G.J, Rigden, D.J, Clague, M.J, Urbe, S, Barsukov, I.L.
Deposit date:2011-10-03
Release date:2011-11-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Variability of the Ubiquitin Specific Protease Dusp-Ubl Double Domains.
FEBS Lett., 585, 2011
4A3O
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Crystal structure of the USP15 DUSP-UBL monomer
Descriptor: GLYCEROL, UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15
Authors:Elliott, P.R, Liu, H, Pastok, M.W, Grossmann, G.J, Rigden, D.J, Clague, M.J, Urbe, S, Barsukov, I.L.
Deposit date:2011-10-03
Release date:2011-11-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Variability of the Ubiquitin Specific Protease Dusp-Ubl Double Domains.
FEBS Lett., 585, 2011
4N5B
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Crystal structure of the Nipah virus phosphoprotein tetramerization domain
Descriptor: IMIDAZOLE, Phosphoprotein
Authors:Bruhn, J.F, Barnett, K, Bibby, J, Thomas, J, Keegan, R, Rigden, D, Bornholdt, Z.A, Saphire, E.O.
Deposit date:2013-10-09
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the nipah virus phosphoprotein tetramerization domain.
J.Virol., 88, 2014
2PTW
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Crystal Structure of the T. brucei enolase complexed with sulphate, identification of a metal binding site IV
Descriptor: 1,2-ETHANEDIOL, Enolase, SULFATE ION, ...
Authors:Navarro, M.V.A.S, Rigden, D.J, Garratt, R.C, Dias, S.M.G.
Deposit date:2007-05-08
Release date:2007-11-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural flexibility in Trypanosoma brucei enolase revealed by X-ray crystallography and molecular dynamics.
Febs J., 274, 2007

 

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