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PDB: 48 results

6BTC
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BU of 6btc by Molmil
SCCmec type IV LP1413 - nucleic acids binding protein
Descriptor: LP1413 - SCCmec type IV-encoded DNA binding protein
Authors:Rice, P.A, Mir-Sanchis, I.
Deposit date:2017-12-06
Release date:2018-07-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1774075 Å)
Cite:Crystal Structure of an Unusual Single-Stranded DNA-Binding Protein Encoded by Staphylococcal Cassette Chromosome Elements.
Structure, 26, 2018
2NP2
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BU of 2np2 by Molmil
Hbb-DNA complex
Descriptor: 36-MER, Hbb
Authors:Rice, P.A, Mouw, K.W.
Deposit date:2006-10-26
Release date:2007-02-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Shaping the Borrelia burgdorferi genome: crystal structure and binding properties of the DNA-bending protein Hbb.
Mol.Microbiol., 63, 2007
2RSL
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BU of 2rsl by Molmil
REFINEMENT OF GAMMA DELTA RESOLVASE REVEALS A STRIKINGLY FLEXIBLE MOLECULE
Descriptor: GAMMA DELTA-RESOLVASE, SULFATE ION
Authors:Rice, P.A, Steitz, T.A.
Deposit date:1993-09-08
Release date:1994-04-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Refinement of gamma delta resolvase reveals a strikingly flexible molecule.
Structure, 2, 1994
5DGK
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BU of 5dgk by Molmil
SCCmec type IV Cch - active helicase
Descriptor: Active helicase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Rice, P.A, Mir-Sanchis, I.
Deposit date:2015-08-27
Release date:2016-08-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.895 Å)
Cite:Staphylococcal SCCmec elements encode an active MCM-like helicase and thus may be replicative.
Nat.Struct.Mol.Biol., 23, 2016
1IHF
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BU of 1ihf by Molmil
INTEGRATION HOST FACTOR/DNA COMPLEX
Descriptor: CADMIUM ION, DNA (35-MER), DNA (5'-D(*GP*CP*TP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*C P*AP*CP*C)-3'), ...
Authors:Rice, P.A, Yang, S.-W, Mizuuchi, K, Nash, H.A.
Deposit date:1996-08-21
Release date:1997-02-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn.
Cell(Cambridge,Mass.), 87, 1996
2R0Q
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Crystal structure of a serine recombinase- DNA regulatory complex
Descriptor: 31-MER, Putative transposon Tn552 DNA-invertase bin3, SULFATE ION
Authors:Rice, P.A, Mouw, K.W.
Deposit date:2007-08-21
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Architecture of a serine recombinase-DNA regulatory complex.
Mol.Cell, 30, 2008
1GDR
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MODEL FOR A DNA MEDIATED SYNAPTIC COMPLEX SUGGESTED BY CRYSTAL PACKING OF GAMMA DELTA RESOLVASE SUBUNITS
Descriptor: GAMMA DELTA-RESOLVASE
Authors:Rice, P.A, Steitz, T.A.
Deposit date:1993-08-31
Release date:1994-04-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Model for a DNA-mediated synaptic complex suggested by crystal packing of gamma delta resolvase subunits.
EMBO J., 13, 1994
1BCM
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BU of 1bcm by Molmil
BACTERIOPHAGE MU TRANSPOSASE CORE DOMAIN WITH 2 MONOMERS PER ASYMMETRIC UNIT
Descriptor: BACTERIOPHAGE MU TRANSPOSASE
Authors:Rice, P.A, Mizuuchi, K.
Deposit date:1995-05-26
Release date:1995-10-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the bacteriophage Mu transposase core: a common structural motif for DNA transposition and retroviral integration.
Cell(Cambridge,Mass.), 82, 1995
1BCO
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BU of 1bco by Molmil
BACTERIOPHAGE MU TRANSPOSASE CORE DOMAIN
Descriptor: BACTERIOPHAGE MU TRANSPOSASE
Authors:Rice, P.A, Mizuuchi, K.
Deposit date:1995-05-26
Release date:1995-10-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the bacteriophage Mu transposase core: a common structural motif for DNA transposition and retroviral integration.
Cell(Cambridge,Mass.), 82, 1995
1P4E
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BU of 1p4e by Molmil
Flpe W330F mutant-DNA Holliday Junction Complex
Descriptor: 33-MER, 5'-D(*TP*AP*AP*GP*TP*TP*CP*CP*TP*AP*TP*TP*C)-3', 5'-D(*TP*TP*TP*AP*AP*AP*AP*GP*AP*AP*TP*AP*GP*GP*AP*AP*CP*TP*TP*C)-3', ...
Authors:Rice, P.A, Chen, Y.
Deposit date:2003-04-23
Release date:2003-05-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The role of the conserved Trp330 in Flp-mediated recombination. Functional and structural analysis
J.Biol.Chem., 278, 2003
8SH5
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BU of 8sh5 by Molmil
Crystal structure of 3'cap-independent translation enhancers (CITE) from Pea enation mosaic virus RNA 2 (PEMV2) with Fab BL3-6K170A
Descriptor: Fab BL3-6K170A heavy chain, Fab BL3-6K170A light chain, RNA (88-MER)
Authors:Lewicka, A, Roman, C, Rice, P.A, Piccirilli, J.A.
Deposit date:2023-04-13
Release date:2023-08-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of a cap-independent translation enhancer RNA.
Nucleic Acids Res., 51, 2023
3HVT
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BU of 3hvt by Molmil
STRUCTURAL BASIS OF ASYMMETRY IN THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE HETERODIMER
Descriptor: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66)
Authors:Steitz, T.A, Smerdon, S.J, Jaeger, J, Wang, J, Kohlstaedt, L.A, Chirino, A.J, Friedman, J.M, Rice, P.A.
Deposit date:1994-07-25
Release date:1994-10-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the binding site for nonnucleoside inhibitors of the reverse transcriptase of human immunodeficiency virus type 1.
Proc.Natl.Acad.Sci.Usa, 91, 1994
6NY9
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BU of 6ny9 by Molmil
Alpha/beta hydrolase domain-containing protein 10 from mouse
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Mycophenolic acid acyl-glucuronide esterase, mitochondrial, ...
Authors:Cao, Y, Rice, P.A, Dickinson, B.C.
Deposit date:2019-02-11
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:ABHD10 is an S-depalmitoylase affecting redox homeostasis through peroxiredoxin-5.
Nat.Chem.Biol., 15, 2019
4R4P
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BU of 4r4p by Molmil
Crystal Structure of the VS ribozyme-A756G mutant
Descriptor: MAGNESIUM ION, VS ribozyme RNA
Authors:Piccirilli, J.A, Suslov, N.B, Dasgupta, S, Huang, H, Lilley, D.M.J, Rice, P.A.
Deposit date:2014-08-19
Release date:2015-09-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Crystal structure of the Varkud satellite ribozyme.
Nat.Chem.Biol., 11, 2015
4R4V
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BU of 4r4v by Molmil
Crystal structure of the VS ribozyme - G638A mutant
Descriptor: MAGNESIUM ION, POTASSIUM ION, VS ribozyme RNA
Authors:Piccirilli, J.A, Suslov, N.B, Dasgupta, S, Huang, H, Lilley, D.M.J, Rice, P.A.
Deposit date:2014-08-19
Release date:2015-09-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Crystal structure of the Varkud satellite ribozyme.
Nat.Chem.Biol., 11, 2015
3HSE
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BU of 3hse by Molmil
Crystal structure of Staphylococcus aureus protein SarZ in reduced form
Descriptor: HTH-type transcriptional regulator sarZ
Authors:Poor, C.B, Duguid, E, Rice, P.A, He, C.
Deposit date:2009-06-10
Release date:2009-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of the reduced, sulfenic acid, and mixed disulfide forms of SarZ, a redox active global regulator in Staphylococcus aureus.
J.Biol.Chem., 284, 2009
3HSR
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BU of 3hsr by Molmil
Crystal structure of Staphylococcus aureus protein SarZ in mixed disulfide form
Descriptor: ACETATE ION, GLYCEROL, HTH-type transcriptional regulator sarZ, ...
Authors:Poor, C.B, Duguid, E, Rice, P.A, He, C.
Deposit date:2009-06-10
Release date:2009-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of the reduced, sulfenic acid, and mixed disulfide forms of SarZ, a redox active global regulator in Staphylococcus aureus.
J.Biol.Chem., 284, 2009
3JSO
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BU of 3jso by Molmil
Classic Protein With a New Twist: crystal structure of a LexA repressor DNA complex
Descriptor: DNA (5'-D(*TP*AP*TP*AP*CP*TP*GP*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*CP*AP*GP*TP*A)-3'), LexA repressor
Authors:Zhang, A.P.P, Pigli, Y.Z, Rice, P.A.
Deposit date:2009-09-10
Release date:2010-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure of the LexA-DNA complex and implications for SOS box measurement.
Nature, 466, 2010
3K3R
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BU of 3k3r by Molmil
Unrefined crystal structure of a LexA-DNA complex
Descriptor: DNA (28-MER), LexA repressor
Authors:Zhang, A.P.P, Pigli, Y.Z, Rice, P.A.
Deposit date:2009-10-04
Release date:2010-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of the LexA-DNA complex and implications for SOS box measurement.
Nature, 466, 2010
3JSP
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BU of 3jsp by Molmil
Classic Protein With a New Twist: crystal structure of a LexA repressor DNA complex
Descriptor: DNA (5'-D(*TP*AP*TP*AP*CP*TP*GP*TP*AP*TP*GP*CP*GP*CP*AP*TP*AP*CP*AP*GP*TP*A)-3'), LexA repressor
Authors:Zhang, A.P.P, Pigli, Y.Z, Rice, P.A.
Deposit date:2009-09-10
Release date:2010-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the LexA-DNA complex and implications for SOS box measurement.
Nature, 466, 2010
3HRM
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BU of 3hrm by Molmil
Crystal structure of Staphylococcus aureus protein SarZ in sulfenic acid form
Descriptor: HTH-type transcriptional regulator sarZ
Authors:Poor, C.B, Duguid, E, Rice, P.A, He, C.
Deposit date:2009-06-09
Release date:2009-07-07
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of the reduced, sulfenic acid, and mixed disulfide forms of SarZ, a redox active global regulator in Staphylococcus aureus.
J.Biol.Chem., 284, 2009
3K2Z
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Crystal structure of a LexA protein from Thermotoga maritima
Descriptor: GLYCEROL, LexA repressor
Authors:Zhang, A.P.P, Rice, P.A.
Deposit date:2009-09-30
Release date:2010-10-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of a LexA protein from Thermotoga maritima
To be Published
8DUZ
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BU of 8duz by Molmil
Protective antibody against gonococcal lipooligosaccharide bound to peptide mimetic
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Beernink, P.T, Beernink, B.P, Rice, P.A, Ram, S.
Deposit date:2022-07-27
Release date:2023-07-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Protective antibody against gonococcal lipooligosaccharide bound to peptide mimetic
to be published
4FCY
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BU of 4fcy by Molmil
Crystal structure of the bacteriophage Mu transpososome
Descriptor: DNA (13-MER), DNA (49-MER), DNA (68-MER), ...
Authors:Montano, S.P, Pigli, Y.Z, Rice, P.A.
Deposit date:2012-05-25
Release date:2012-11-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.706 Å)
Cite:The Mu transpososome structure sheds light on DDE recombinase evolution.
Nature, 491, 2012
5C31
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BU of 5c31 by Molmil
Constitutively active Sin recombinase catalytic domain reveals two rotational intermediates
Descriptor: SULFATE ION, Sin, putative plasmid resolvase dimer
Authors:Trejo, C.S, Rice, P.A.
Deposit date:2015-06-16
Release date:2016-12-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Snapshots of a molecular swivel in action
Nucleic Acids Res., 2018

 

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