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PDB: 786 件
2V5F
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Crystal structure of wild type peptide-binding domain of human type I collagen prolyl 4-hydroxylase.
分子名称: HEXA-HISTIDINE PEPTIDE, PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1
著者Pekkala, M, Hieta, R, Kivirikko, K, Myllyharju, J, Wierenga, R.
登録日2008-10-06
公開日2009-11-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal Structure of Wild Type Peptide-Binding Domain of Human Type I Collagen Prolyl 4- Hydroxylase.
To be Published
3BT9
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BU of 3bt9 by Molmil
crystal structure of QacR(E57Q) bound to Dequalinium
分子名称: DEQUALINIUM, HTH-type transcriptional regulator qacR, SULFATE ION
著者Shumacher, M.A, Schuman, J.T, Brennan, R.G.
登録日2007-12-28
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
2WL6
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BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. THE N316H-H348N MUTANT.
分子名称: ACETYL-COA ACETYLTRANSFERASE
著者Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
登録日2009-06-22
公開日2009-11-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
3BTI
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BU of 3bti by Molmil
crystal structure of QacR(E58Q) bound to berberine
分子名称: BERBERINE, HTH-type transcriptional regulator qacR, SULFATE ION
著者Schumacher, M.A, Schuman, J.T, Brennan, R.G.
登録日2007-12-28
公開日2008-08-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
2WD8
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BU of 2wd8 by Molmil
PTERIDINE REDUCTASE 1 (PTR1) FROM TRYPANOSOMA BRUCEI IN COMPLEX WITH NADP AND DDD00071204
分子名称: 1-(3,4-DICHLOROBENZYL)-7-PHENYL-1H-BENZIMIDAZOL-2-AMINE, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Robinson, D.A, Wyatt, P.G, Spinks, D, Brenk, R.
登録日2009-03-20
公開日2009-06-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献One Scaffold, Three Binding Modes: Novel and Selective Pteridine Reductase 1 Inhibitors Derived from Fragment Hits Discovered by Virtual Screening.
J.Med.Chem., 52, 2009
3BTC
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BU of 3btc by Molmil
crystal structure of QacR(E57Q) bound to malachite green
分子名称: HTH-type transcriptional regulator qacR, MALACHITE GREEN, SULFATE ION
著者Schumacher, M.A, Schuman, J.T, Brennan, R.G.
登録日2007-12-28
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
3BTJ
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BU of 3btj by Molmil
crystal structure of QacR(E58Q) bound to dequalinium
分子名称: DEQUALINIUM, HTH-type transcriptional regulator qacR, SULFATE ION
著者Schumacher, M.A, Schuman, J.T, Brennan, R.G.
登録日2007-12-28
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
2VTZ
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BU of 2vtz by Molmil
Biosynthetic thiolase from Z. ramigera. Complex of the C89A mutant with coenzyme A.
分子名称: ACETYL-COA ACETYLTRANSFERASE, COENZYME A, SULFATE ION
著者Kursula, P, Merilainen, G, Wierenga, R.K.
登録日2008-05-19
公開日2008-10-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Sulfur Atoms of the Substrate Coa and the Catalytic Cysteine are Required for a Productive Mode of Substrate Binding in Bacterial Biosynthetic Thiolase, a Thioester-Dependent Enzyme.
FEBS J., 275, 2008
3BTL
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BU of 3btl by Molmil
crystal structure of QacR(E58Q) bound to malachite green
分子名称: HTH-type transcriptional regulator qacR, MALACHITE GREEN, SULFATE ION
著者Schumacher, M.A, Schuman, J.T, Brennan, R.G.
登録日2007-12-28
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
3GIB
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BU of 3gib by Molmil
Crystal Structure of the Complex of the E. coli Hfq with Poly(A)
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3', Protein hfq
著者Link, T.M, Valentin-Hansen, P, Brennan, R.G.
登録日2009-03-05
公開日2009-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of Escherichia coli Hfq bound to polyriboadenylate RNA
Proc.Natl.Acad.Sci.USA, 106, 2009
7LQ2
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BU of 7lq2 by Molmil
Apo Rr RsiG- crystal form 1
分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, RR RsiG
著者Schumacher, M.A, Brennan, R.G.
登録日2021-02-12
公開日2021-07-14
最終更新日2021-08-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Evolution of a sigma-(c-di-GMP)-anti-sigma switch.
Proc.Natl.Acad.Sci.USA, 118, 2021
2VEM
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BU of 2vem by Molmil
Structure-based enzyme engineering efforts with an inactive monomeric TIM variant: the importance of a single point mutation for generating an active site with suitable binding properties
分子名称: (3-bromo-2-oxo-propoxy)phosphonic acid, GLYCOSOMAL TRIOSEPHOSPHATE ISOMERASE, TERTIARY-BUTYL ALCOHOL
著者Alahuhta, M, Salin, M, Casteleijn, M.G, Kemmer, C, El-Sayed, I, Augustyns, K, Neubauer, P, Wierenga, R.K.
登録日2007-10-25
公開日2008-02-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-Based Protein Engineering Efforts with a Monomeric Tim Variant: The Importance of a Single Point Mutation for Generating an Active Site with Suitable Binding Properties.
Protein Eng.Des.Sel., 21, 2008
1GYR
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BU of 1gyr by Molmil
Mutant form of enoyl thioester reductase from Candida tropicalis
分子名称: 2,4-DIENOYL-COA REDUCTASE, GLYCEROL, SULFATE ION
著者Airenne, T.T, Torkko, J.M, Van Der Plas, S, Sormunen, R.T, Kastaniotis, A.J, Wierenga, R.K, Hiltunen, J.K.
登録日2002-04-29
公開日2003-03-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-Function Analysis of Enoyl Thioester Reductase Involved in Mitochondrial Maintenance
J.Mol.Biol., 327, 2003
2XO0
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BU of 2xo0 by Molmil
xpt-pbuX C74U Riboswitch from B. subtilis bound to 24-diamino-1,3,5- triazine identified by virtual screening
分子名称: 1,3,5-TRIAZINE-2,4-DIAMINE, ACETATE ION, COBALT HEXAMMINE(III), ...
著者Daldrop, P, Reyes, F.E, Robinson, D.A, Hammond, C.M, Lilley, D.M.J, Batey, R.T, Brenk, R.
登録日2010-08-09
公開日2011-04-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Novel ligands for a purine riboswitch discovered by RNA-ligand docking.
Chem. Biol., 18, 2011
1GUF
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BU of 1guf by Molmil
Enoyl thioester reductase from Candida tropicalis
分子名称: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH, B-SPECIFIC] 1, MITOCHONDRIAL, ...
著者Airenne, T.T, Torkko, J.M, Van Der Plas, S, Sormunen, R.T, Kastaniotis, A.J, Wierenga, R.K, Hiltunen, J.K.
登録日2002-01-25
公開日2003-03-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure-Function Analysis of Enoyl Thioester Reductase Involved in Mitochondrial Maintenance
J.Mol.Biol., 327, 2003
3GZE
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BU of 3gze by Molmil
Algal prolyl 4-hydroxylase complexed with zinc and (Ser-Pro)5 peptide substrate
分子名称: ACETIC ACID, Peptide substrate (Ser-Pro)5, Predicted protein, ...
著者Koski, M.K, Wierenga, R.K.
登録日2009-04-07
公開日2009-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献The Crystal Structure of an Algal Prolyl 4-Hydroxylase Complexed with a Proline-rich Peptide Reveals a Novel Buried Tripeptide Binding Motif
J.Biol.Chem., 284, 2009
1J5E
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BU of 1j5e by Molmil
Structure of the Thermus thermophilus 30S Ribosomal Subunit
分子名称: 16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Wimberly, B.T, Brodersen, D.E, Clemons Jr, W.M, Morgan-Warren, R, Carter, A.P, Vonrhein, C, Hartsch, T, Ramakrishnan, V.
登録日2002-04-08
公開日2002-04-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structure of the 30S ribosomal subunit.
Nature, 407, 2000
1GU7
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BU of 1gu7 by Molmil
Enoyl thioester reductase from Candida tropicalis
分子名称: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH, B-SPECIFIC] 1,MITOCHONDRIAL, GLYCEROL, ...
著者Airenne, T.T, Torkko, J.M, Wierenga, R.K, Hiltunen, J.K.
登録日2002-01-24
公開日2003-03-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-Function Analysis of Enoyl Thioester Reductase Involved in Mitochondrial Maintenance
J.Mol.Biol., 327, 2003
1HNW
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BU of 1hnw by Molmil
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Brodersen, D.E, Clemons Jr, W.M, Carter, A.P, Morgan-Warren, R, Wimberly, B.T, Ramakrishnan, V.
登録日2000-12-08
公開日2001-02-21
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit.
Cell(Cambridge,Mass.), 103, 2000
1HR0
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BU of 1hr0 by Molmil
CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Carter, A.P, Clemons Jr, W.M, Brodersen, D.E, Morgan-Warren, R.J, Wimberly, B.T, Ramakrishnan, V.
登録日2000-12-20
公開日2001-01-24
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of an initiation factor bound to the 30S ribosomal subunit.
Science, 291, 2001
3GN2
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BU of 3gn2 by Molmil
Structure of Pteridine Reductase 1 (PTR1) from TRYPANOSOMA BRUCEI in ternary complex with cofactor (NADP+) and inhibitor (DDD00066730)
分子名称: 1-(3,4-dichlorobenzyl)-1H-benzimidazol-2-amine, ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Tulloch, L.B, Brenk, R, Hunter, W.N.
登録日2009-03-16
公開日2009-12-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献One scaffold, three binding modes: novel and selective pteridine reductase 1 inhibitors derived from fragment hits discovered by virtual screening.
J.Med.Chem., 52, 2009
7JU3
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BU of 7ju3 by Molmil
MtrR bound to the mtrCDE operator from Neisseria gonorrhoeae
分子名称: CALCIUM ION, DNA (5'-D(*AP*CP*AP*TP*AP*CP*AP*CP*GP*AP*TP*TP*GP*CP*AP*CP*GP*GP*AP*TP*A)-3'), DNA (5'-D(*TP*AP*TP*CP*CP*GP*TP*GP*CP*AP*AP*TP*CP*GP*TP*GP*TP*AP*TP*GP*T)-3'), ...
著者Beggs, G.A, Shafer, W.M, Brennan, R.G.
登録日2020-08-19
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structures of Neisseria gonorrhoeae MtrR-operator complexes reveal molecular mechanisms of DNA recognition and antibiotic resistance-conferring clinical mutations.
Nucleic Acids Res., 49, 2021
7JNP
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BU of 7jnp by Molmil
MtrR bound to the rpoH operator from Neisseria gonorrhoeae
分子名称: CALCIUM ION, DNA (5'-D(*TP*AP*CP*AP*TP*AP*CP*GP*TP*GP*GP*TP*TP*GP*TP*AP*TP*GP*TP*AP*A)-3'), DNA (5'-D(*TP*TP*AP*CP*AP*TP*AP*CP*AP*AP*CP*CP*AP*CP*GP*TP*AP*TP*GP*TP*A)-3'), ...
著者Beggs, G.A, Shafer, W.M, Brennan, R.G.
登録日2020-08-05
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of Neisseria gonorrhoeae MtrR-operator complexes reveal molecular mechanisms of DNA recognition and antibiotic resistance-conferring clinical mutations.
Nucleic Acids Res., 49, 2021
4LLL
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BU of 4lll by Molmil
Crystal structure of S. aureus MepR-DNA complex
分子名称: MepR, Palindromized mepR operator sequence
著者Birukou, I, Brennan, R.G.
登録日2013-07-09
公開日2014-05-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.036 Å)
主引用文献Structural mechanism of transcription regulation of the Staphylococcus aureus multidrug efflux operon mepRA by the MarR family repressor MepR.
Nucleic Acids Res., 42, 2014
4L9J
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Crystal structure of S. aureus MepR in DNA-binding conformation
分子名称: MepR
著者Birukou, I, Brennan, R.G.
登録日2013-06-18
公開日2013-09-11
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献The molecular mechanisms of allosteric mutations impairing MepR repressor function in multidrug-resistant strains of Staphylococcus aureus.
MBio, 4, 2013

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