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PDB: 424 results

5DUN
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BU of 5dun by Molmil
The crystal structure of OMe substituted twister ribozyme
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (54-MER)
Authors:Ren, A, Patel, D.J, Micura, R, Rajashankar, K.R.
Deposit date:2015-09-19
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:A Mini-Twister Variant and Impact of Residues/Cations on the Phosphodiester Cleavage of this Ribozyme Class.
Angew.Chem.Int.Ed.Engl., 54, 2015
5DDO
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BU of 5ddo by Molmil
Structural and Dynamic Basis for Low Affinity-High Selectivity Binding of L-glutamine by the Gln-riboswitch
Descriptor: L-glutamine riboswitch (58-MER), U1 small nuclear ribonucleoprotein A
Authors:Ren, A, Patel, D.
Deposit date:2015-08-25
Release date:2015-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.
Cell Rep, 13, 2015
4IX7
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BU of 4ix7 by Molmil
Crystal Structure of the insv-BEN domain complexed to its DNA target site
Descriptor: 5'-D(*GP*TP*TP*CP*CP*AP*AP*TP*TP*GP*GP*AP*A)-3', RE55538p
Authors:Ren, A, Serganov, A, Patel, D.J.
Deposit date:2013-01-24
Release date:2013-03-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.581 Å)
Cite:The BEN domain is a novel sequence-specific DNA-binding domain conserved in neural transcriptional repressors.
Genes Dev., 27, 2013
3KD7
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BU of 3kd7 by Molmil
Designed TPR module (CTPR390) in complex with its peptide-ligand (Hsp90 peptide)
Descriptor: CTPR390, Hsp90 MEEVD peptide
Authors:Cortajarena, A.L, Wang, J, Regan, L.
Deposit date:2009-10-22
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of a designed tetratricopeptide repeat module in complex with its peptide ligand.
Febs J., 277, 2010
3CB0
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BU of 3cb0 by Molmil
CobR
Descriptor: 4-HYDROXYPHENYLACETATE 3-MONOOXYGENASE, FLAVIN MONONUCLEOTIDE
Authors:Lawrence, A.D, Warren, M.J, Pickersgill, R.W.
Deposit date:2008-02-21
Release date:2008-03-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification, characterization, and structure/function analysis of a corrin reductase involved in adenosylcobalamin biosynthesis
J.Biol.Chem., 283, 2008
3DPA
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BU of 3dpa by Molmil
CRYSTAL STRUCTURE OF CHAPERONE PROTEIN PAPD REVEALS AN IMMUNOGLOBULIN FOLD
Descriptor: CHAPERONE PROTEIN PAPD
Authors:Holmgren, A, Branden, C.-I.
Deposit date:1991-10-09
Release date:1991-10-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of chaperone protein PapD reveals an immunoglobulin fold.
Nature, 342, 1989
1I4V
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BU of 1i4v by Molmil
SOLUTION STRUCTURE OF THE UMUD' HOMODIMER
Descriptor: UMUD' PROTEIN
Authors:Ferentz, A.E, Walker, G.C, Wagner, G.
Deposit date:2001-02-23
Release date:2001-08-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Converting a DNA damage checkpoint effector (UmuD2C) into a lesion bypass polymerase (UmuD'2C).
EMBO J., 20, 2001
1E50
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BU of 1e50 by Molmil
AML1/CBFbeta complex
Descriptor: CORE-BINDING FACTOR ALPHA SUBUNIT, CORE-BINDING FACTOR CBF-BETA
Authors:Warren, A.J, Bravo, J, Williams, R.L, Rabbits, T.H.
Deposit date:2000-07-13
Release date:2001-07-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for the Heterodimeric Interaction between the Acute Leukaemia-Associated Transcription Factors Aml1 and Cbfbeta
Embo J., 19, 2000
4IRA
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BU of 4ira by Molmil
CobR in complex with FAD
Descriptor: 4-hydroxyphenylacetate 3-monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
Authors:Lawrence, A.D, Scott, A.F, Warren, M.J, Pickersgill, R.W.
Deposit date:2013-01-14
Release date:2014-01-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biophysical characterisation and structure-function analysis of Brucella melitensis CobR: Protein-flavin interactions determine function and stability
To be Published
1ZEM
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BU of 1zem by Molmil
Crystal Structure of NAD+-Bound Xylitol Dehydrogenase
Descriptor: MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, xylitol dehydrogenase
Authors:Ehrensberger, A.H, Elling, R.A, Wilson, D.K.
Deposit date:2005-04-19
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-guided engineering of xylitol dehydrogenase cosubstrate specificity.
Structure, 14, 2006
1PZ0
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BU of 1pz0 by Molmil
Structure of NADPH-dependent family 11 aldo-keto reductase AKR11A(holo)
Descriptor: IolS protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SODIUM ION
Authors:Ehrensberger, A.H, Wilson, D.K.
Deposit date:2003-07-09
Release date:2004-03-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and Catalytic Diversity in the Two Family 11 Aldo-keto Reductases
J.Mol.Biol., 337, 2004
1QL3
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BU of 1ql3 by Molmil
Structure of the soluble domain of cytochrome c552 from Paracoccus denitrificans in the reduced state
Descriptor: CYTOCHROME C552, HEME C
Authors:Harrenga, A, Reincke, B, Rueterjans, H, Ludwig, B, Michel, H.
Deposit date:1999-08-20
Release date:2000-02-06
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of the Soluble Domain of Cytochrome C552 from Paracoccus Denitrificans in the Oxidized and Reduced States
J.Mol.Biol., 295, 2000
1QL4
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BU of 1ql4 by Molmil
Structure of the soluble domain of cytochrome c552 from Paracoccus denitrificans in the oxidised state
Descriptor: CYTOCHROME C552, HEME C
Authors:Harrenga, A, Reincke, B, Rueterjans, H, Ludwig, B, Michel, H.
Deposit date:1999-08-20
Release date:2000-02-03
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the Soluble Domain of Cytochrome C552 from Paracoccus Denitrificans in the Oxidized and Reduced States
J.Mol.Biol., 295, 2000
1QLE
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BU of 1qle by Molmil
CRYO-STRUCTURE OF THE PARACOCCUS DENITRIFICANS FOUR-SUBUNIT CYTOCHROME C OXIDASE IN THE COMPLETELY OXIDIZED STATE COMPLEXED WITH AN ANTIBODY FV FRAGMENT
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CCYTOCHROME C OXIDASE, ...
Authors:Harrenga, A, Michel, H.
Deposit date:1999-08-30
Release date:1999-12-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Cytochrome C Oxidase from Paracoccus Denitrificans Does not Change the Metal Center Ligation Upon Reduction
J.Biol.Chem., 274, 1999
1E1D
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BU of 1e1d by Molmil
Hybrid Cluster Protein from Desulfovibrio vulgaris
Descriptor: HYDROXYLAMINE REDUCTASE, IRON/SULFUR CLUSTER, IRON/SULFUR/OXYGEN HYBRID CLUSTER
Authors:Arendsen, A.F, Cooper, S.J, Bailey, S, Garner, C.D, Hagen, W.R, Lindley, P.F.
Deposit date:2000-05-02
Release date:2000-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Hybrid-Cluster Protein (Hcp) from Desulfovibrio Vulgaris (Hildenborough) at 1.6 A Resolution.
Biochemistry, 39, 2000
8FY8
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BU of 8fy8 by Molmil
5-MeO-DMT-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Descriptor: 2-(5-methoxy-1H-indol-3-yl)-N,N-dimethylethan-1-amine, CHOLESTEROL HEMISUCCINATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Warren, A.L, Zilberg, G, Capper, M.J, Wacker, D.
Deposit date:2023-01-25
Release date:2024-05-15
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Structural pharmacology and therapeutic potential of 5-methoxytryptamines.
Nature, 630, 2024
1PYF
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BU of 1pyf by Molmil
Structure of NADPH-dependent family 11 aldo-keto reductase AKR11A(apo)
Descriptor: 1,2-ETHANEDIOL, IolS protein, SODIUM ION
Authors:Ehrensberger, A.H, Wilson, D.K.
Deposit date:2003-07-08
Release date:2004-03-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Catalytic Diversity in the Two Family 11 Aldo-keto Reductases
J.Mol.Biol., 337, 2004
1PZ1
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BU of 1pz1 by Molmil
Structure of NADPH-dependent family 11 aldo-keto reductase AKR11B(holo)
Descriptor: General stress protein 69, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ehrensberger, A.H, Wilson, D.K.
Deposit date:2003-07-09
Release date:2004-03-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Catalytic Diversity in the Two Family 11 Aldo-keto Reductases
J.Mol.Biol., 337, 2004
6OEC
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BU of 6oec by Molmil
Yeast Spc42 Trimeric Coiled-Coil Amino Acids 181-211 fused to PDB: 3H5I
Descriptor: CALCIUM ION, Response regulator/sensory box protein/GGDEF domain protein,Spindle pole body component SPC42
Authors:Drennan, A.C, Shivaani, K, Seeger, M.A, Andreas, M.P, Gardner, J.M, Sether, E.K.R, Jasperson, S.L, Rayment, I.
Deposit date:2019-03-27
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.514 Å)
Cite:Structure and function of Spc42 coiled-coils in yeast centrosome assembly and duplication.
Mol.Biol.Cell, 30, 2019
6OEI
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BU of 6oei by Molmil
Yeast Spc42 N-terminal coiled-coil fused to PDB: 3K2N
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Spindle pole body component SPC42,Sigma-54-dependent transcriptional regulator
Authors:Drennan, A.C, Krishna, S, Seeger, M.A, Andreas, M.P, Gardner, J.M, Sether, E.K.R, Jaspersen, S.L, Rayment, I.
Deposit date:2019-03-27
Release date:2019-04-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structure and function of Spc42 coiled-coils in yeast centrosome assembly and duplication.
Mol.Biol.Cell, 30, 2019
8FYE
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BU of 8fye by Molmil
4-F, 5-MeO-PyrT-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Descriptor: 4-fluoro-5-methoxy-3-[2-(pyrrolidin-1-yl)ethyl]-1H-indole, CHOLESTEROL HEMISUCCINATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Warren, A.L, Zilberg, G, Capper, M.J, Wacker, D.
Deposit date:2023-01-26
Release date:2024-05-15
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural pharmacology and therapeutic potential of 5-methoxytryptamines.
Nature, 630, 2024
8FYL
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BU of 8fyl by Molmil
Vilazodone-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Descriptor: 5-{4-[4-(5-cyano-1H-indol-3-yl)butyl]piperazin-1-yl}-1-benzofuran-2-carboxamide, CHOLESTEROL HEMISUCCINATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Warren, A.L, Zilberg, G, Capper, M.J, Wacker, D.
Deposit date:2023-01-26
Release date:2024-05-15
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Structural pharmacology and therapeutic potential of 5-methoxytryptamines.
Nature, 630, 2024
8FYT
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BU of 8fyt by Molmil
LSD-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Descriptor: (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide, CHOLESTEROL HEMISUCCINATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Warren, A.L, Zilberg, G, Capper, M.J, Wacker, D.
Deposit date:2023-01-26
Release date:2024-05-15
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Structural pharmacology and therapeutic potential of 5-methoxytryptamines.
Nature, 630, 2024
8FYX
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BU of 8fyx by Molmil
Buspirone-bound serotonin 1A (5-HT1A) receptor-Gi1 protein complex
Descriptor: Buspirone, CHOLESTEROL HEMISUCCINATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Warren, A.L, Zilberg, G, Capper, M.J, Wacker, D.
Deposit date:2023-01-26
Release date:2024-05-15
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:Structural pharmacology and therapeutic potential of 5-methoxytryptamines.
Nature, 630, 2024
6OD2
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BU of 6od2 by Molmil
Yeast Spc42 C-terminal Antiparallel Coiled-Coil
Descriptor: Spindle pole body component SPC42
Authors:Drennan, A.C, Krishna, S, Seeger, M.A, Andreas, M.P, Gardner, J.M, Sether, E.K.R, Jaspersen, S.L, Rayment, I.
Deposit date:2019-03-25
Release date:2019-04-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.435 Å)
Cite:Structure and function of Spc42 coiled-coils in yeast centrosome assembly and duplication.
Mol.Biol.Cell, 30, 2019

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