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PDB: 384 件
3BCQ
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BU of 3bcq by Molmil
Crystal structure of oxy-hemoglobin from Brycon cephalus
分子名称: Alpha-chain hemoglobin, Beta-chain hemoglobin, OXYGEN MOLECULE, ...
著者Poy, C.D, Leopoldino, A.M, Rahal, P, de Azevedo, W.F, Rodriguez, G.O.B, Murakami, M.T.
登録日2007-11-13
公開日2008-10-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of oxy-hemoglobin from Brycon cephalus
To be Published
3W6I
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BU of 3w6i by Molmil
Crystal structure of 19F probe-labeled hCAI
分子名称: 1-(2-ethoxyethoxy)-3,5-bis(trifluoromethyl)benzene, Carbonic anhydrase 1, ZINC ION
著者Takaoka, Y, Kioi, Y, Morito, A, Otani, J, Arita, K, Ashihara, E, Ariyoshi, M, Tochio, H, Shirakawa, M, Hamachi, I.
登録日2013-02-14
公開日2013-03-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.693 Å)
主引用文献Quantitative Comparison of Protein Dynamics in Live Cells and In Vitro by In-Cell 19F-NMR
To be published
1WYW
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BU of 1wyw by Molmil
Crystal Structure of SUMO1-conjugated thymine DNA glycosylase
分子名称: CHLORIDE ION, G/T mismatch-specific thymine DNA glycosylase, MAGNESIUM ION, ...
著者Baba, D, Maita, N, Jee, J.G, Uchimura, Y, Saitoh, H, Sugasawa, K, Hanaoka, F, Tochio, H, Hiroaki, H, Shirakawa, M.
登録日2005-02-17
公開日2005-06-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of thymine DNA glycosylase conjugated to SUMO-1.
Nature, 435, 2005
5CAB
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BU of 5cab by Molmil
Structure of Leishmania nucleoside diphostate kinase mutant Del5-Cterm
分子名称: Nucleoside diphosphate kinase, SULFATE ION
著者Vieira, P.S, de Giuseppe, P.O, de Oliveira, A.H.C, Murakami, M.T.
登録日2015-06-29
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.953 Å)
主引用文献The role of the C-terminus and Kpn loop in the quaternary structure stability of nucleoside diphosphate kinase from Leishmania parasites.
J.Struct.Biol., 192, 2015
5C7P
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BU of 5c7p by Molmil
Structure of Leishmania nucleoside diphostate kinase mutant P95S
分子名称: Nucleoside diphosphate kinase
著者Vieira, P.S, de Giuseppe, P.O, de Oliveira, A.H.C, Murakami, M.T.
登録日2015-06-24
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.144 Å)
主引用文献The role of the C-terminus and Kpn loop in the quaternary structure stability of nucleoside diphosphate kinase from Leishmania parasites.
J.Struct.Biol., 192, 2015
1X0K
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BU of 1x0k by Molmil
Crystal Structure of Bacteriorhodopsin at pH 10
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
著者Okumura, H, Murakami, M, Kouyama, T.
登録日2005-03-23
公開日2005-08-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin
J.Mol.Biol., 351, 2005
2ZKE
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BU of 2zke by Molmil
Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA
分子名称: DNA (5'-D(*DCP*DTP*DAP*DCP*DCP*DGP*DGP*DAP*DTP*DTP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DAP*DAP*DTP*DCP*(5CM)P*DGP*DGP*DTP*DAP*DG)-3'), E3 ubiquitin-protein ligase UHRF1
著者Arita, K, Ariyoshi, M, Tochio, H, Nakamura, Y, Shirakawa, M.
登録日2008-03-19
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism
Nature, 455, 2008
5CAA
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BU of 5caa by Molmil
Structure of Leishmania nucleoside diphosphate kinase mutant P100S/del5-Cterm
分子名称: Nucleoside diphosphate kinase
著者Vieira, P.S, de Giuseppe, P.O, de Oliveira, A.H.C, Murakami, M.T.
登録日2015-06-29
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The role of the C-terminus and Kpn loop in the quaternary structure stability of nucleoside diphosphate kinase from Leishmania parasites.
J.Struct.Biol., 192, 2015
1X0I
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BU of 1x0i by Molmil
Crystal Structure of the Acid Blue Form of Bacteriorhodopsin
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
著者Okumura, H, Murakami, M, Kouyama, T.
登録日2005-03-23
公開日2005-08-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin
J.Mol.Biol., 351, 2005
2RRE
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BU of 2rre by Molmil
Structure and function of the N-terminal nucleolin binding domain of nuclear valocine containing protein like 2 (NVL2) harboring a nucleolar localization signal
分子名称: Putative uncharacterized protein
著者Fujiwara, Y, Fujiwara, K, Goda, N, Iwaya, N, Tenno, T, Shirakawa, M, Hiroaki, H.
登録日2010-08-03
公開日2011-04-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and function of the N-terminal nucleolin binding domain of nuclear valosin-containing protein-like 2 (NVL2) harboring a nucleolar localization signal
J.Biol.Chem., 286, 2011
3A4S
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BU of 3a4s by Molmil
The crystal structure of the SLD2:Ubc9 complex
分子名称: NFATC2-interacting protein, SUMO-conjugating enzyme UBC9
著者Sekiyama, N, Arita, K, Ikeda, Y, Ariyoshi, M, Tochio, H, Saitoh, H, Shirakawa, M.
登録日2009-07-14
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for regulation of poly-SUMO chain by a SUMO-like domain of Nip45
Proteins, 78, 2009
1VGO
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BU of 1vgo by Molmil
Crystal Structure of Archaerhodopsin-2
分子名称: Archaerhodopsin 2, RETINAL, SULFATE ION, ...
著者Yoshimura, K, Enami, N, Murakami, M, Okumura, H, Ihara, K, Kouyama, T.
登録日2004-04-28
公開日2005-10-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of archaerhodopsin-1 and -2: Common structural motif in archaeal light-driven proton pumps
J.Mol.Biol., 358, 2006
3A1B
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BU of 3a1b by Molmil
Crystal structure of the DNMT3A ADD domain in complex with histone H3
分子名称: 1,2-ETHANEDIOL, DNA (cytosine-5)-methyltransferase 3A, Histone H3.1, ...
著者Otani, J, Arita, K, Ariyoshi, M, Shirakawa, M.
登録日2009-03-28
公開日2009-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.292 Å)
主引用文献Structural basis for recognition of H3K4 methylation status by the DNA methyltransferase 3A ATRX-DNMT3-DNMT3L domain
Embo Rep., 10, 2009
3A4R
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BU of 3a4r by Molmil
The crystal structure of SUMO-like domain 2 in Nip45
分子名称: 1,2-ETHANEDIOL, NFATC2-interacting protein, SULFATE ION
著者Sekiyama, N, Arita, K, Ikeda, Y, Ariyoshi, M, Tochio, H, Saitoh, H, Shirakawa, M.
登録日2009-07-14
公開日2010-02-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural basis for regulation of poly-SUMO chain by a SUMO-like domain of Nip45
Proteins, 78, 2009
3A1A
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BU of 3a1a by Molmil
Crystal Structure of the DNMT3A ADD domain
分子名称: 1,2-ETHANEDIOL, DNA (cytosine-5)-methyltransferase 3A, ZINC ION
著者Otani, J, Arita, K, Ariyoshi, M, Shirakawa, M.
登録日2009-03-28
公開日2009-11-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for recognition of H3K4 methylation status by the DNA methyltransferase 3A ATRX-DNMT3-DNMT3L domain
Embo Rep., 10, 2009
4D8X
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BU of 4d8x by Molmil
Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in space group P6322 at pH 4.6
分子名称: Purine nucleoside phosphorylase deoD-type
著者Santos, C.R, Meza, A.N, Martins, N.H, Giuseppe, P.O, Murakami, M.T.
登録日2012-01-11
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
4D8V
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BU of 4d8v by Molmil
Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis at pH 4.2
分子名称: ADENINE, Purine nucleoside phosphorylase deoD-type, SULFATE ION
著者Santos, C.R, Meza, A.N, Martins, N.H, Giuseppe, P.O, Murakami, M.T.
登録日2012-01-11
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
4D98
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BU of 4d98 by Molmil
Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in space group H32 at pH 7.5
分子名称: CHLORIDE ION, GLYCEROL, Purine nucleoside phosphorylase deoD-type, ...
著者Santos, C.R, Meza, A.N, Martins, N.H, Giuseppe, P.O, Murakami, M.T.
登録日2012-01-11
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
4D9H
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Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with adenosine
分子名称: ADENOSINE, Purine nucleoside phosphorylase deoD-type
著者Giuseppe, P.O, Martins, N.H, Meza, A.N, Murakami, M.T.
登録日2012-01-11
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
4DA0
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BU of 4da0 by Molmil
Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with 2'-deoxyguanosine
分子名称: 2'-DEOXY-GUANOSINE, CHLORIDE ION, Purine nucleoside phosphorylase deoD-type
著者Martins, N.H, Giuseppe, P.O, Meza, A.N, Murakami, M.T.
登録日2012-01-12
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
3ATQ
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BU of 3atq by Molmil
Geranylgeranyl Reductase (GGR) from Sulfolobus acidocaldarius
分子名称: Conserved Archaeal protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, TETRADECANE
著者Sasaki, D, Fujihashi, M, Murakami, M, Yoshimura, T, Hemmi, H, Miki, K.
登録日2011-01-12
公開日2011-05-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and mutation analysis of archaeal geranylgeranyl reductase
J.Mol.Biol., 409, 2011
3B0F
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BU of 3b0f by Molmil
Crystal structure of the UBA domain of p62 and its interaction with ubiquitin
分子名称: SULFATE ION, Sequestosome-1
著者Isogai, S, Morimoto, D, Arita, K, Unzai, S, Tenno, T, Hasegawa, J, Sou, Y, Komatsu, M, Tanaka, K, Shirakawa, M, Tochio, H.
登録日2011-06-09
公開日2011-06-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of the ubiquitin-associated (UBA) domain of p62 and its interaction with ubiquitin.
J.Biol.Chem., 286, 2011
2ZKF
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BU of 2zkf by Molmil
Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA
分子名称: DNA (5'-D(*DCP*DTP*DAP*DTP*DCP*(5CM)P*DGP*DGP*DTP*DGP*DA)-3'), DNA (5'-D(P*DCP*DAP*DCP*DCP*DGP*DGP*DAP*DTP*DAP*DGP*DA)-3'), E3 ubiquitin-protein ligase UHRF1
著者Arita, K, Ariyoshi, M, Tochio, H, Nakamura, Y, Shirakawa, M.
登録日2008-03-19
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism
Nature, 455, 2008
2ZKG
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BU of 2zkg by Molmil
Crystal structure of unliganded SRA domain of mouse Np95
分子名称: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase UHRF1
著者Arita, K, Ariyoshi, M, Tochio, H, Nakamura, Y, Shirakawa, M.
登録日2008-03-19
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism
Nature, 455, 2008
4E4C
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BU of 4e4c by Molmil
Crystal structure of Notexin at 1.8 A resolution
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Phospholipase A2, SULFATE ION
著者Ullah, A, Spencer, P, Murakami, M.T, Arni, R.K.
登録日2012-03-12
公開日2012-03-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High resolution structure of Notexin
To be Published

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件を2024-08-07に公開中

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