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PDB: 108 件
3M7G
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Structure of topoisomerase domain of topoisomerase V protein
分子名称: Topoisomerase V
著者Rajan, R, Taneja, B, Mondragon, A.
登録日2010-03-16
公開日2010-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of minimal catalytic fragments of topoisomerase v reveals conformational changes relevant for DNA binding.
Structure, 18, 2010
3M6K
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Crystal Structure of N-terminal 44 kDa fragment of topoisomerase V in the presence of guanidium hydrochloride
分子名称: PHOSPHATE ION, Topoisomerase V
著者Rajan, R, Taneja, B, Mondragon, A.
登録日2010-03-15
公開日2010-08-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of minimal catalytic fragments of topoisomerase v reveals conformational changes relevant for DNA binding.
Structure, 18, 2010
3M6Z
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Crystal structure of an N-terminal 44 kDa fragment of topoisomerase V in the presence of guanidium hydrochloride
分子名称: CHLORIDE ION, GUANIDINE, MAGNESIUM ION, ...
著者Rajan, R, Taneja, B, Mondragon, A.
登録日2010-03-16
公開日2010-08-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structures of minimal catalytic fragments of topoisomerase v reveals conformational changes relevant for DNA binding.
Structure, 18, 2010
5N5I
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Crystal Structure of VIM-1 metallo-beta-lactamase in complex with hydrolysed meropenem
分子名称: (2~{S},3~{R},4~{S})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-(dimethylcarbamoy l)pyrrolidin-3-yl]sulfanyl-3-methyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
著者Salimraj, R, Hinchliffe, P, Spencer, J.
登録日2017-02-14
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of VIM-1 complexes explain active site heterogeneity in VIM-class metallo-beta-lactamases.
FEBS J., 286, 2019
8D0O
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Human alpha1,3-fucosyltransferase FUT9, heavy atom derivative
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9, CESIUM ION, ...
著者Kadirvelraj, R, Wood, Z.A.
登録日2022-05-26
公開日2023-05-24
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for Lewis antigen synthesis by the alpha 1,3-fucosyltransferase FUT9.
Nat.Chem.Biol., 19, 2023
8D34
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Crystal Structure of SARS CoV-2 NSP15 Endroribonuclease H250A
分子名称: Uridylate-specific endoribonuclease nsp15
著者Farraj, R.A, Edwards, R.A, Glover, J.N.M.
登録日2022-05-31
公開日2023-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Crystal Structure of SARS CoV-2 NSP15 Endroribonuclease H250A
To Be Published
3D4K
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Concanavalin A Complexed to a Synthetic Analog of the Trimannoside
分子名称: CALCIUM ION, Concanavalin-A, GLYCEROL, ...
著者Kadirvelraj, R, Foley, B.L, Dyekjaer, J.D, Woods, R.J.
登録日2008-05-14
公開日2009-03-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Involvement of water in carbohydrate-protein binding: concanavalin A revisited.
J.Am.Chem.Soc., 130, 2008
8D0Q
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Human FUT9 bound to GDP-CF3-Fucose and H-Type 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9, GUANOSINE-5'-DIPHOSPHATE, ...
著者Kadirvelraj, R, Wood, Z.A.
登録日2022-05-26
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Structural basis for Lewis antigen synthesis by the alpha 1,3-fucosyltransferase FUT9.
Nat.Chem.Biol., 19, 2023
8D0W
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Human FUT9 bound to H-Type 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9, GLYCEROL, ...
著者Kadirvelraj, R, Wood, Z.A.
登録日2022-05-26
公開日2023-05-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.332 Å)
主引用文献Structural basis for Lewis antigen synthesis by the alpha 1,3-fucosyltransferase FUT9.
Nat.Chem.Biol., 19, 2023
8D0X
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Human FUT9 bound to LNnT
分子名称: 1,2-ETHANEDIOL, 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9, GLYCEROL, ...
著者Kadirvelraj, R, Wood, Z.A.
登録日2022-05-26
公開日2023-05-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Structural basis for Lewis antigen synthesis by the alpha 1,3-fucosyltransferase FUT9.
Nat.Chem.Biol., 19, 2023
8D0P
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Human FUT9, unliganded
分子名称: 1,2-ETHANEDIOL, 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9, SULFATE ION, ...
著者Kadirvelraj, R, Wood, Z.A.
登録日2022-05-26
公開日2023-05-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Structural basis for Lewis antigen synthesis by the alpha 1,3-fucosyltransferase FUT9.
Nat.Chem.Biol., 19, 2023
8D0S
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Human FUT9 bound to GDP and LNnT
分子名称: 1,2-ETHANEDIOL, 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9, GUANOSINE-5'-DIPHOSPHATE, ...
著者Kadirvelraj, R, Wood, Z.A.
登録日2022-05-26
公開日2023-05-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Structural basis for Lewis antigen synthesis by the alpha 1,3-fucosyltransferase FUT9.
Nat.Chem.Biol., 19, 2023
8D0U
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Human FUT9 bound to GDP
分子名称: 1,2-ETHANEDIOL, 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9, GUANOSINE-5'-DIPHOSPHATE, ...
著者Kadirvelraj, R, Wood, Z.A.
登録日2022-05-26
公開日2023-05-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Structural basis for Lewis antigen synthesis by the alpha 1,3-fucosyltransferase FUT9.
Nat.Chem.Biol., 19, 2023
8D0R
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Human FUT9 bound to GDP and H-Type 2
分子名称: 1,2-ETHANEDIOL, 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9, GUANOSINE-5'-DIPHOSPHATE, ...
著者Kadirvelraj, R, Wood, Z.A.
登録日2022-05-26
公開日2023-05-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural basis for Lewis antigen synthesis by the alpha 1,3-fucosyltransferase FUT9.
Nat.Chem.Biol., 19, 2023
5N5H
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Crystal structure of metallo-beta-lactamase VIM-1 in complex with ML302F inhibitor
分子名称: (2Z)-2-sulfanyl-3-(2,3,6-trichlorophenyl)prop-2-enoic acid, Beta-lactamase VIM-1, ZINC ION
著者Salimraj, R, Hinchliffe, P, Spencer, J.
登録日2017-02-14
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structures of VIM-1 complexes explain active site heterogeneity in VIM-class metallo-beta-lactamases.
FEBS J., 286, 2019
5N5G
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Crystal structure of di-zinc metallo-beta-lactamase VIM-1
分子名称: BICINE, Beta-lactamase VIM-1, ZINC ION
著者Salimraj, R, Hinchliffe, P, Spencer, J.
登録日2017-02-14
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.292 Å)
主引用文献Crystal structures of VIM-1 complexes explain active site heterogeneity in VIM-class metallo-beta-lactamases.
FEBS J., 286, 2019
3PTZ
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BU of 3ptz by Molmil
Role of Packing Defects in the Evolution of Allostery and Induced Fit in Human UDP-Glucose Dehydrogenase.
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE
著者Kadirvelraj, R, Wood, Z.A.
登録日2010-12-03
公開日2011-06-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Role of Packing Defects in the Evolution of Allostery and Induced Fit in Human UDP-Glucose Dehydrogenase.
Biochemistry, 50, 2011
4GFJ
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Crystal structure of Topo-78, an N-terminal 78kDa fragment of topoisomerase V
分子名称: GLYCEROL, Topoisomerase V, ZINC ION
著者Rajan, R, Prasad, R, Taneja, B, Wilson, S.H, Mondragon, A.
登録日2012-08-03
公開日2012-12-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Identification of one of the apurinic/apyrimidinic lyase active sites of topoisomerase V by structural and functional studies.
Nucleic Acids Res., 41, 2013
3PHZ
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Crystal Structure Analysis of Polyporus squamosus lectin bound to human-type influenza-binding epitope Neu5Aca2-6Galb1-4GlcNAc
分子名称: N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ricin B-related lectin, ...
著者Kadirvelraj, R, Woods, R.J.
登録日2010-11-04
公開日2011-07-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and binding analysis of Polyporus squamosus lectin in complex with the Neu5Ac{alpha}2-6Gal{beta}1-4GlcNAc human-type influenza receptor.
Glycobiology, 21, 2011
3PRJ
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Role of Packing Defects in the Evolution of Allostery and Induced Fit in Human UDP-Glucose Dehydrogenase.
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE
著者Kadirvelraj, R, Wood, Z.A.
登録日2010-11-29
公開日2011-06-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Role of Packing Defects in the Evolution of Allostery and Induced Fit in Human UDP-Glucose Dehydrogenase.
Biochemistry, 50, 2011
1RBF
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CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
分子名称: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Varadarajan, R, Richards, F.M.
登録日1992-06-12
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
1RBI
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CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
分子名称: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Varadarajan, R, Richards, F.M.
登録日1992-06-12
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
1RBC
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CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
分子名称: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Varadarajan, R, Richards, F.M.
登録日1992-06-12
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
5HM5
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Crystal structure of Topo-97, an N-terminal 97kDa fragment of topoisomerase V
分子名称: Topoisomerase V
著者Rajan, R, Osterman, A, Mondragon, A.
登録日2016-01-15
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Methanopyrus kandleri topoisomerase V contains three distinct AP lyase active sites in addition to the topoisomerase active site.
Nucleic Acids Res., 44, 2016
1RBE
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CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
分子名称: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Varadarajan, R, Richards, F.M.
登録日1992-06-12
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992

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