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PDB: 818 件

8C12
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Identification of an intermediate activation state of PAK5 reveals a novel mechanism of kinase inhibition.
分子名称: PAK5-Af17, Serine/threonine-protein kinase PAK 5
著者Martin, H.L, Turner, A.L, Trinh, C.H, Bayliss, R.W, Tomlinson, D.C.
登録日2022-12-19
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.549 Å)
主引用文献Affimer-mediated locking of p21-activated kinase 5 in an intermediate activation state results in kinase inhibition.
Cell Rep, 42, 2023
3L32
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Structure of the dimerisation domain of the rabies virus phosphoprotein
分子名称: Phosphoprotein
著者Ivanov, I, Crepin, T, Jamin, M, Ruigrok, R.W.H.
登録日2009-12-16
公開日2010-02-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the dimerisation domain of the rabies virus phosphoprotein
J.Virol., 2010
4YNC
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OYE1 W116A COMPLEXED WITH (Z)-METHYL-3-CYANO-3-PHENYLACRYLATE IN A NON PRODUCTIVE BINDING MODE
分子名称: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, NADPH dehydrogenase 1, ...
著者Santangelo, S, Brenna, E, Stewart, J.D, Powell III, R.W.
登録日2015-03-09
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献Opposite Enantioselectivity in the Bioreduction of (Z)-beta-Aryl-beta-cyanoacrylates Mediated by the Tryptophan 116 Mutants of Old Yellow Enzyme 1: Synthetic Approach to (R)- and (S)-beta-Aryl-gamma-lactams
Adv.Synth.Catal., 357, 2015
3NDZ
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The structure of the catalytic and carbohydrate binding domain of endoglucanase D from Clostridium cellulovorans bound to cellotriose
分子名称: Endoglucanase D, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Bianchetti, C.M, Smith, R.W, Bingman, C.A, Phillips Jr, G.N.
登録日2010-06-08
公開日2011-06-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献The structure of the catalytic and carbohydrate binding domain of endoglucanase D bound to cellotriose
To be Published
3KRG
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Structural insights into substrate specificity and the anti beta-elimination mechanism of pectate lyase
分子名称: COBALT (II) ION, GLYCEROL, Pectate lyase, ...
著者Pickersgill, R.W, To, T.T.
登録日2009-11-18
公開日2010-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural insights into substrate specificity and the anti beta-elimination mechanism of pectate lyase
Biochemistry, 49, 2010
1CA1
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ALPHA-TOXIN FROM CLOSTRIDIUM PERFRINGENS
分子名称: ALPHA-TOXIN, CADMIUM ION, ZINC ION
著者Naylor, C.E, Basak, A.K, Titball, R.W.
登録日1998-04-22
公開日1999-05-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the key toxin in gas gangrene.
Nat.Struct.Biol., 5, 1998
3NJR
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Crystal structure of C-terminal domain of precorrin-6Y C5,15-methyltransferase from Rhodobacter capsulatus
分子名称: GLYCEROL, Precorrin-6y methylase, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Seyedarabi, A, Pickersgill, R.W.
登録日2010-06-17
公開日2011-06-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献An enzyme-trap approach allows isolation of intermediates in cobalamin biosynthesis.
Nat.Chem.Biol., 8, 2012
3NDY
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The structure of the catalytic and carbohydrate binding domain of endoglucanase D from Clostridium cellulovorans
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endoglucanase D
著者Bianchetti, C.M, Smith, R.W, Bingman, C.A, Phillips Jr, G.N.
登録日2010-06-08
公開日2010-09-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of the catalytic and carbohydrate binding domain of endoglucanase D
To be Published
4IRA
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BU of 4ira by Molmil
CobR in complex with FAD
分子名称: 4-hydroxyphenylacetate 3-monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
著者Lawrence, A.D, Scott, A.F, Warren, M.J, Pickersgill, R.W.
登録日2013-01-14
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Biophysical characterisation and structure-function analysis of Brucella melitensis CobR: Protein-flavin interactions determine function and stability
To be Published
6WQV
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BU of 6wqv by Molmil
GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis with bound cellotriose
分子名称: 1,2-ETHANEDIOL, Endoglucanase, NITRATE ION, ...
著者Bianchetti, C.M, Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-04-29
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
4IXR
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RT fs X-ray diffraction of Photosystem II, first illuminated state
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Kern, J, Alonso-Mori, R, Tran, R, Hattne, J, Gildea, R.J, Echols, N, Gloeckner, C, Hellmich, J, Laksmono, H, Sierra, R.G, Lassalle-Kaiser, B, Koroidov, S, Lampe, A, Han, G, Gul, S, DiFiore, D, Milathianaki, D, Fry, A.R, Miahnahri, A, Schafer, D.W, Messerschmidt, M, Seibert, M.M, Koglin, J.E, Sokaras, D, Weng, T.-C, Sellberg, J, Latimer, M.J, Grosse-Kunstleve, R.W, Zwart, P.H, White, W.E, Glatzel, P, Adams, P.D, Bogan, M.J, Williams, G.J, Boutet, S, Messinger, J, Zouni, A, Sauter, N.K, Yachandra, V.K, Bergmann, U, Yano, J.
登録日2013-01-27
公開日2013-02-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (5.9 Å)
主引用文献Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature.
Science, 340, 2013
3NUT
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BU of 3nut by Molmil
Crystal structure of the methyltransferase CobJ
分子名称: GLYCEROL, Precorrin-3 methylase, S-ADENOSYL-L-HOMOCYSTEINE
著者Pickersgill, R.W, Hutchison, T, To, T.T.
登録日2010-07-07
公開日2011-07-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Crystal structure of the methyltransferase CobJ
TO BE PUBLISHED
4IXQ
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RT fs X-ray diffraction of Photosystem II, dark state
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Kern, J, Alonso-Mori, R, Tran, R, Hattne, J, Gildea, R.J, Echols, N, Gloeckner, C, Hellmich, J, Laksmono, H, Sierra, R.G, Lassalle-Kaiser, B, Koroidov, S, Lampe, A, Han, G, Gul, S, DiFiore, D, Milathianaki, D, Fry, A.R, Miahnahri, A, Schafer, D.W, Messerschmidt, M, Seibert, M.M, Koglin, J.E, Sokaras, D, Weng, T.-C, Sellberg, J, Latimer, M.J, Grosse-Kunstleve, R.W, Zwart, P.H, White, W.E, Glatzel, P, Adams, P.D, Bogan, M.J, Williams, G.J, Boutet, S, Messinger, J, Zouni, A, Sauter, N.K, Yachandra, V.K, Bergmann, U, Yano, J.
登録日2013-01-27
公開日2013-02-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (5.7 Å)
主引用文献Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature.
Science, 340, 2013
3O2U
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BU of 3o2u by Molmil
S. cerevisiae Ubc12
分子名称: GLYCEROL, NEDD8-conjugating enzyme UBC12
著者Scott, D.C, Monda, J.K, Grace, C.R.R, Duda, D.M, Kriwacki, R.W, Kurz, T, Schulman, B.A.
登録日2010-07-22
公開日2010-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献A dual E3 mechanism for Rub1 ligation to Cdc53.
Mol.Cell, 39, 2010
3O2P
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A Dual E3 Mechanism for Rub1 Ligation to Cdc53: Dcn1(P)-Cdc53(WHB)
分子名称: Cell division control protein 53, Defective in cullin neddylation protein 1, GLYCEROL
著者Scott, D.C, Monda, J.K, Grace, C.R.R, Duda, D.M, Kriwacki, R.W, Kurz, T, Schulman, B.A.
登録日2010-07-22
公開日2010-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.233 Å)
主引用文献A dual E3 mechanism for Rub1 ligation to Cdc53.
Mol.Cell, 39, 2010
6WQY
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GH5-4 broad specificity endoglucanase from Bacteroides salanitronis
分子名称: CHLORIDE ION, Cellulase, MAGNESIUM ION
著者Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-04-29
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
4JIZ
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BU of 4jiz by Molmil
Human Mob1-phosphopeptide complex
分子名称: MOB kinase activator 1A, ZINC ION, phosphopeptide
著者Stach, L, Ogrodowicz, R.W, Rock, J.M, Lim, D, Yaffe, M.B, Amon, A, Smerdon, S.J.
登録日2013-03-07
公開日2013-04-17
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Activation of the yeast Hippo pathway by phosphorylation-dependent assembly of signaling complexes.
Science, 340, 2013
6WQP
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GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis
分子名称: 1,2-ETHANEDIOL, BICARBONATE ION, Endoglucanase, ...
著者Bianchetti, C.M, Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-04-29
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
3PAC
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Crystal structure of PduT a trimeric bacterial microcompartment protein with 4Fe-4S cluster binding site
分子名称: Shell protein
著者Pang, A.H, Warren, M.J, Pickersgill, R.W.
登録日2010-10-19
公開日2010-12-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structure of PduT, a trimeric bacterial microcompartment protein with a 4Fe-4S cluster-binding site
Acta Crystallogr.,Sect.D, 67, 2011
3PMK
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Crystal structure of the Vesicular Stomatitis Virus RNA free nucleoprotein/phosphoprotein complex
分子名称: Nucleocapsid protein, Phosphoprotein
著者Leyrat, C, Yabukarski, F, Tarbouriech, N, Ruigrok, R.W.H, Jamin, M.
登録日2010-11-17
公開日2011-10-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Structure of the Vesicular Stomatitis Virus N0-P Complex
Plos Pathog., 7, 2011
6ZFV
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BU of 6zfv by Molmil
Solution NMR structure of human GATA2 N-terminal zinc finger domain
分子名称: Endothelial transcription factor GATA-2, ZINC ION
著者Nurmohamed, S.S, Broadhurst, R.W, May, G, Enver, T.
登録日2020-06-18
公開日2021-06-30
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Solution NMR structure of human GATA2 C-terminal zinc finger domain
To Be Published
6XU2
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Human karyopherin RanBP5 (isoform-3)
分子名称: Antipain, Importin-5, NICKEL (II) ION
著者Swale, C, McCarthy, A.A, Berger, I, Bieniossek, C, Delmas, B, Ruigrok, R.W.H, Crepin, T.
登録日2020-01-17
公開日2020-04-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.834 Å)
主引用文献X-ray Structure of the Human Karyopherin RanBP5, an Essential Factor for Influenza Polymerase Nuclear Trafficking.
J.Mol.Biol., 432, 2020
4KMO
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Crystal Structure of the Vps33-Vps16 HOPS subcomplex from Chaetomium thermophilum
分子名称: Putative vacuolar protein sorting-associated protein, SULFATE ION, Small conjugating protein ligase-like protein
著者Baker, R.W, Jeffrey, P.D, Hughson, F.M.
登録日2013-05-08
公開日2013-06-26
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of the Sec1/Munc18 (SM) Protein Vps33, Alone and Bound to the Homotypic Fusion and Vacuolar Protein Sorting (HOPS) Subunit Vps16*
Plos One, 8, 2013
6XSU
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GH5-4 broad specificity endoglucanase from Ruminococcus flavefaciens
分子名称: ETHANOL, GH5-4 broad specificity endoglucanase
著者Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-07-16
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
6XRK
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GH5-4 broad specificity endoglucanase from an uncultured bovine rumen ciliate
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-07-13
公開日2020-10-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.419 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020

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