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PDB: 829 results

2K47
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Solution structure of the C-terminal N-RNA binding domain of the Vesicular Stomatitis Virus Phosphoprotein
Descriptor: Phosphoprotein
Authors:Ribeiro, E.A, Favier, A, Gerard, F.C, Leyrat, C, Brutscher, B, Blondel, D, Ruigrok, R.W, Blackledge, M, Jamin, M.
Deposit date:2008-05-28
Release date:2008-09-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the C-Terminal Nucleoprotein-RNA Binding Domain of the Vesicular Stomatitis Virus Phosphoprotein.
J.Mol.Biol., 2008
1GJX
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Solution structure of the lipoyl domain of the chimeric dihydrolipoyl dehydrogenase P64K from Neisseria meningitidis
Descriptor: PYRUVATE DEHYDROGENASE
Authors:Tozawa, K, Broadhurst, R.W, Raine, A.R.C, Fuller, C, Alvarez, A, Guillen, G, Padron, G, Perham, R.N.
Deposit date:2001-08-03
Release date:2001-11-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the Lipoyl Domain of the Chimeric Dihydrolipoyl Dehydrogenase P64K from Neisseria Meningitidis
Eur.J.Biochem., 268, 2001
2NNP
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Crystal structure analysis of HIV-1 protease mutant I84V with a inhibitor saquinavir
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, ACETIC ACID, GLYCEROL, ...
Authors:Tie, Y, Kovalevsky, A.Y, Boross, P, Wang, Y.F, Ghosh, A.K, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2006-10-24
Release date:2007-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Atomic resolution crystal structures of HIV-1 protease and mutants V82A and I84V with saquinavir.
Proteins, 67, 2007
1GJZ
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Solution structure of a dimeric N-terminal fragment of human ubiquitin
Descriptor: UBIQUITIN
Authors:Bolton, D, Evans, P.A, Stott, K, Broadhurst, R.W.
Deposit date:2001-08-06
Release date:2001-12-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Properties of a Dimeric N-Terminal Fragment of Human Ubiquitin.
J.Mol.Biol., 314, 2001
1J9Y
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Crystal structure of mannanase 26A from Pseudomonas cellulosa
Descriptor: MANNANASE A, ZINC ION
Authors:Hogg, D, Woo, E.-J, Bolam, D.N, McKie, V.A, Gilbert, H.J, Pickersgill, R.W.
Deposit date:2001-05-29
Release date:2001-06-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of mannanase 26A from Pseudomonas cellulosa and analysis of residues involved in substrate binding
J.Biol.Chem., 276, 2001
1JCX
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Aquifex aeolicus KDO8P synthase in complex with API and Cadmium
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, CADMIUM ION, {[(2,2-DIHYDROXY-ETHYL)-(2,3,4,5-TETRAHYDROXY-6-PHOSPHONOOXY-HEXYL)-AMINO]-METHYL}-PHOSPHONIC ACID
Authors:Wang, J, Duewel, H.S, Woodard, R.W, Gatti, D.L.
Deposit date:2001-06-11
Release date:2002-01-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of Aquifex aeolicus KDO8P synthase in complex with R5P and PEP, and with a bisubstrate inhibitor: role of active site water in catalysis.
Biochemistry, 40, 2001
2LPF
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R state structure of monomeric phospholamban (C36A, C41F, C46A)
Descriptor: Cardiac phospholamban
Authors:De Simone, A, Montalvao, R.W, Gustavsson, M, Shi, L, Veglia, G, Vendruscolo, M.
Deposit date:2012-02-11
Release date:2013-02-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures of the Excited States of Phospholamban and Shifts in Their Populations upon Phosphorylation.
Biochemistry, 52, 2013
1JCY
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Aquifex aeolicus KDO8P synthase in complex with R5P, PEP and Cadmium
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, CADMIUM ION, PHOSPHATE ION, ...
Authors:Wang, J, Duewel, H.S, Woodard, R.W, Gatti, D.L.
Deposit date:2001-06-11
Release date:2002-01-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of Aquifex aeolicus KDO8P synthase in complex with R5P and PEP, and with a bisubstrate inhibitor: role of active site water in catalysis.
Biochemistry, 40, 2001
1G8E
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CRYSTAL STRUCTURE OF FLHD FROM ESCHERICHIA COLI
Descriptor: FLAGELLAR TRANSCRIPTIONAL ACTIVATOR FLHD
Authors:Campos, A, Zhang, R.G, Alkire, R.W, Matsumura, P, Westbrook, E.M.
Deposit date:2000-11-17
Release date:2001-03-07
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the global regulator FlhD from Escherichia coli at 1.8 A resolution.
Mol.Microbiol., 39, 2001
1FWW
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AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH PEP, A5P AND CADMIUM
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, ARABINOSE-5-PHOSPHATE, CADMIUM ION, ...
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-24
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Electronic structure of the metal center in the Cd(2+), Zn(2+), and Cu(2+) substituted forms of KDO8P synthase: implications for catalysis.
Biochemistry, 48, 2009
2NMZ
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Crystal structure analysis of HIV-1 protease mutant V82A with a inhibitor saquinavir
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, PROTEASE, SULFATE ION
Authors:Tie, Y, Kovalevsky, A.Y, Boross, P, Wang, Y.F, Ghosh, A.K, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2006-10-23
Release date:2007-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Atomic resolution crystal structures of HIV-1 protease and mutants V82A and I84V with saquinavir.
Proteins, 67, 2007
2NNK
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Crystal structure analysis of HIV-1 protease mutant I84V with a inhibitor saquinavir
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, ACETIC ACID, CHLORIDE ION, ...
Authors:Tie, Y, Kovalevsky, A.Y, Boross, P, Wang, Y.F, Ghosh, A.K, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2006-10-24
Release date:2007-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Atomic resolution crystal structures of HIV-1 protease and mutants V82A and I84V with saquinavir.
Proteins, 67, 2007
2NMY
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Crystal structure analysis of HIV-1 protease mutant V82A with a inhibitor saquinavir
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, CHLORIDE ION, PROTEASE, ...
Authors:Tie, Y, Kovalevsky, A.Y, Boross, P, Wang, Y.F, Ghosh, A.K, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2006-10-23
Release date:2007-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic resolution crystal structures of HIV-1 protease and mutants V82A and I84V with saquinavir.
Proteins, 67, 2007
2N14
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Mdmx-295
Descriptor: 4-({(4S,5R)-4-(3-chlorophenyl)-5-(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one, Protein Mdm4
Authors:Grace, C.R, Kriwacki, R.W.
Deposit date:2015-03-20
Release date:2016-01-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Monitoring Ligand-Induced Protein Ordering in Drug Discovery.
J.Mol.Biol., 428, 2016
2N0U
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Mdmx-057
Descriptor: 4-[(4S,5R)-4-(3-chlorophenyl)-5-(4-chlorophenyl)-1-(3-oxidanylidenepiperazin-1-yl)carbonyl-4,5-dihydroimidazol-2-yl]-3-propan-2-yloxy-benzenecarbonitrile, Protein Mdm4
Authors:Grace, C.R, Kriwacki, R.W.
Deposit date:2015-03-17
Release date:2016-01-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Monitoring Ligand-Induced Protein Ordering in Drug Discovery.
J.Mol.Biol., 428, 2016
1JVQ
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Crystal structure at 2.6A of the ternary complex between antithrombin, a P14-P8 reactive loop peptide, and an exogenous tetrapeptide
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTITHROMBIN-III, ...
Authors:Zhou, A, Huntington, J.A, Lomas, D.A, Carrell, R.W, Stein, P.E.
Deposit date:2001-08-31
Release date:2003-06-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:How small peptides block and reverse serpin polymerisation
J.Mol.Biol., 342, 2004
2N89
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Tetrameric i-motif structure of dT-dC-dC-CFL-CFL-dC at acidic pH
Descriptor: DNA (5'-D(*TP*CP*CP*(CFL)P*(CFL)P*C)-3')
Authors:Abou-Assi, H, Harkness, R.W, Martin-Pintado, N, Wilds, C.J, Campos-Olivas, R, Mittermaier, A.K, Gonzalez, C, Damha, M.J.
Deposit date:2015-10-09
Release date:2016-08-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Stabilization of i-motif structures by 2'-beta-fluorination of DNA.
Nucleic Acids Res., 44, 2016
1FXQ
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AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH PEP AND A5P
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, ARABINOSE-5-PHOSPHATE, PHOSPHOENOLPYRUVATE
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-26
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism.
J.Biol.Chem., 276, 2001
1FWT
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AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH PEP, E4P AND CADMIUM
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, CADMIUM ION, ERYTHOSE-4-PHOSPHATE, ...
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-24
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism.
J.Biol.Chem., 276, 2001
1G9M
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HIV-1 HXBC2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ...
Authors:Kwong, P.D, Wyatt, R, Majeed, S, Robinson, J, Sweet, R.W, Sodroski, J, Hendrickson, W.A.
Deposit date:2000-11-24
Release date:2000-12-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of HIV-1 gp120 envelope glycoproteins from laboratory-adapted and primary isolates.
Structure Fold.Des., 8, 2000
2MCV
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Solid-state NMR structure of piscidin 1 in aligned 1:1 phosphatidylethanolamine/phosphoglycerol lipid bilayers
Descriptor: Moronecidin
Authors:Fu, R, Tian, Y, Perrin Jr, B.S, Grant, C.V, Hayden, R.M, Pastor, R.W, Cotten, M.L.
Deposit date:2013-08-27
Release date:2014-01-22
Last modified:2024-10-30
Method:SOLID-STATE NMR
Cite:High-resolution structures and orientations of antimicrobial peptides piscidin 1 and piscidin 3 in fluid bilayers reveal tilting, kinking, and bilayer immersion.
J.Am.Chem.Soc., 136, 2014
1G9N
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HIV-1 YU2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ...
Authors:Kwong, P.D, Wyatt, R, Majeed, S, Robinson, J, Sweet, R.W, Sodroski, J, Hendrickson, W.A.
Deposit date:2000-11-25
Release date:2000-12-27
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of HIV-1 gp120 envelope glycoproteins from laboratory-adapted and primary isolates.
Structure Fold.Des., 8, 2000
1FWN
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AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH PEP
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, PHOSPHATE ION, PHOSPHOENOLPYRUVATE
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-23
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism.
J.Biol.Chem., 276, 2001
1FYC
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INNER LIPOYL DOMAIN FROM HUMAN PYRUVATE DEHYDROGENASE (PDH) COMPLEX, NMR, 1 STRUCTURE
Descriptor: DIHYDROLIPOAMIDE ACETYLTRANSFERASE (E2P)
Authors:Howard, M.J, Fuller, C, Broadhurst, R.W, Quinn, J, Yeaman, S.J, Perham, R.N.
Deposit date:1997-02-21
Release date:1997-09-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional structure of the major autoantigen in primary biliary cirrhosis.
Gastroenterology, 115, 1998
2NT9
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Crystal structure of pectin methylesterase D178A mutant in complex with hexasaccharide IV
Descriptor: Pectinesterase A, alpha-D-galactopyranuronic acid-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-methyl alpha-D-galactopyranuronate-(1-4)-alpha-D-galactopyranuronic acid
Authors:Fries, M, Brocklehurst, K, Shevchik, V.E, Pickersgill, R.W.
Deposit date:2006-11-07
Release date:2007-09-18
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular basis of the activity of the phytopathogen pectin methylesterase.
Embo J., 26, 2007

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