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PDB: 924 results

3GX3
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Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAH
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (94-MER), ...
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-04-01
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch.
J.Mol.Biol., 396, 2010
1RO6
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Crystal structure of PDE4B2B complexed with Rolipram (R & S)
Descriptor: ARSENIC, MANGANESE (II) ION, ROLIPRAM, ...
Authors:Xu, R.X, Rocque, W.J, Lambert, M.H, Vanderwall, D.E, Nolte, R.T.
Deposit date:2003-12-01
Release date:2004-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the catalytic domain of phosphodiesterase 4B complexed with AMP, 8-Br-AMP, and rolipram.
J.Mol.Biol., 337, 2004
3K10
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Crystal structure of telomere capping protein Stn1 from Saccharomyces cerevisiae
Descriptor: Protein STN1
Authors:Gelinas, A.D, Reyes, F.E, Batey, R.T, Wuttke, D.S.
Deposit date:2009-09-25
Release date:2009-10-27
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Telomere capping proteins are structurally related to RPA with an additional telomere-specific domain.
Proc.Natl.Acad.Sci.USA, 106, 2009
1RH6
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Bacteriophage Lambda Excisionase (Xis)-DNA Complex
Descriptor: 5'-D(*CP*TP*AP*TP*GP*TP*AP*GP*TP*CP*TP*GP*TP*TP*G)-3', 5'-D(P*CP*AP*AP*CP*AP*GP*AP*CP*TP*AP*CP*AP*TP*AP*G)-3', Excisionase
Authors:Sam, M.D, Cascio, D, Johnson, R.C, Clubb, R.T.
Deposit date:2003-11-13
Release date:2004-06-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the excisionase-DNA complex from bacteriophage lambda.
J.Mol.Biol., 338, 2004
3J8F
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Cryo-EM reconstruction of poliovirus-receptor complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein VP1, ...
Authors:Strauss, M, Filman, D.J, Belnap, D.M, Cheng, N, Noel, R.T, Hogle, J.M.
Deposit date:2014-10-20
Release date:2015-02-11
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Nectin-Like Interactions between Poliovirus and Its Receptor Trigger Conformational Changes Associated with Cell Entry.
J.Virol., 89, 2015
1V1K
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BU of 1v1k by Molmil
CDK2 IN COMPLEX WITH A DISUBSTITUTED 4, 6-BIS ANILINO PYRIMIDINE CDK4 INHIBITOR
Descriptor: (2R)-1-(DIMETHYLAMINO)-3-{4-[(6-{[2-FLUORO-5-(TRIFLUOROMETHYL)PHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]PHENOXY}PROPAN-2-OL, CELL DIVISION PROTEIN KINASE 2
Authors:Beattie, J.F, Breault, G.A, Ellston, R.P.A, Green, S, Jewsbury, P.J, Midgley, C.J, Naven, R.T, Minshull, C.A, Pauptit, R.A, Tucker, J.A, Pease, J.E.
Deposit date:2004-04-16
Release date:2004-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Cyclin-Dependent Kinase 4 Inhibitors as a Treatment for Cancer. Part 1: Identification and Optimisation of Substituted 4,6-Bis Anilino Pyrimidines
Bioorg.Med.Chem.Lett., 13, 2003
3GQX
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Pyrococcus Horikoshii NOP5 RNA Binding Domain from a twinned crystal form
Descriptor: IODIDE ION, NOP5P PROTEIN
Authors:Reyes, F.E, Hardin, J.W, Batey, R.T.
Deposit date:2009-03-24
Release date:2009-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Analysis of a Critical Interaction within the Archaeal Box C/D Small Ribonucleoprotein Complex
J.Biol.Chem., 284, 2009
3GX7
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Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G mutant A6C/U7G/A87C/U88G bound with SAM
Descriptor: MAGNESIUM ION, RNA (94-MER), S-ADENOSYLMETHIONINE
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-04-01
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch.
J.Mol.Biol., 396, 2010
3GX6
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Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAM in manganese chloride
Descriptor: MANGANESE (II) ION, RNA (94-MER), S-ADENOSYLMETHIONINE
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-04-01
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch.
J.Mol.Biol., 396, 2010
1STS
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STREPTAVIDIN DIMERIZED BY DISULFIDE-BONDED PEPTIDE FCHPQNT-NH2 DIMER
Descriptor: FCHPQNT-NH2, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T, Liu, B, Arze, R, Collins, N.
Deposit date:1995-09-12
Release date:1996-03-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Topochemical catalysis achieved by structure-based ligand design.
J.Biol.Chem., 270, 1995
1TN9
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THE SOLUTION STRUCTURE OF TN916 INTEGRASE N-TERMINAL DOMAIN/DNA COMPLEX
Descriptor: DNA (5'-D(*GP*AP*AP*TP*TP*TP*AP*CP*TP*AP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*TP*AP*GP*TP*AP*AP*AP*TP*TP*C)-3'), PROTEIN (INTEGRASE)
Authors:Clubb, R.T, Wojciak, J.M, Connolly, K.M.
Deposit date:1999-01-21
Release date:1999-09-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of the Tn916 integrase-DNA complex.
Nat.Struct.Biol., 6, 1999
1S75
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SOLUTION STRUCTURE OF A DNA DUPLEX CONTAINING AN ALPHA-ANOMERIC ADENOSINE: INSIGHTS INTO SUBSTRATE RECOGNITION BY ENDONUCLEASE IV
Descriptor: 5'-D(*CP*GP*TP*CP*GP*TP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*(A3A)P*CP*GP*AP*CP*G)-3'
Authors:Aramini, J.M, Cleaver, S.H, Pon, R.T, Cunningham, R.P, Germann, M.W.
Deposit date:2004-01-28
Release date:2004-04-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a DNA Duplex Containing an alpha-Anomeric Adenosine: Insights into Substrate Recognition by Endonuclease IV.
J.Mol.Biol., 338, 2004
3HTE
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Crystal structure of nucleotide-free hexameric ClpX
Descriptor: ATP-dependent Clp protease ATP-binding subunit clpX, SULFATE ION
Authors:Glynn, S.E, Martin, A, Baker, T.A, Sauer, R.T.
Deposit date:2009-06-11
Release date:2009-11-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (4.026 Å)
Cite:Structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine.
Cell(Cambridge,Mass.), 139, 2009
1SJ0
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Human Estrogen Receptor Alpha Ligand-binding Domain in Complex with the Antagonist Ligand 4-D
Descriptor: (2S,3R)-2-(4-(2-(PIPERIDIN-1-YL)ETHOXY)PHENYL)-2,3-DIHYDRO-3-(4-HYDROXYPHENYL)BENZO[B][1,4]OXATHIIN-6-OL, Estrogen receptor
Authors:Kim, S, Wu, J.Y, Birzin, E.T, Chan, W, Pai, L.Y, Yang, Y.T, Mosley, R.T, Fitzgerald, P.M, Sharma, N, DiNinno, F, Rohrer, S.P, Schaeffer, J.M, Hammond, M.L.
Deposit date:2004-03-02
Release date:2004-04-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Estrogen Receptor Ligands. II. Discovery of Benzoxathiins as Potent, Selective Estrogen Receptor alpha Modulators.
J.Med.Chem., 47, 2004
1S74
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SOLUTION STRUCTURE OF A DNA DUPLEX CONTAINING AN ALPHA-ANOMERIC ADENOSINE: INSIGHTS INTO SUBSTRATE RECOGNITION BY ENDONUCLEASE IV
Descriptor: 5'-D(*CP*GP*TP*CP*GP*TP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*(A3A)P*CP*GP*AP*CP*G)-3'
Authors:Aramini, J.M, Cleaver, S.H, Pon, R.T, Cunningham, R.P, Germann, M.W.
Deposit date:2004-01-28
Release date:2004-04-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a DNA Duplex Containing an alpha-Anomeric Adenosine: Insights into Substrate Recognition by Endonuclease IV.
J.Mol.Biol., 338, 2004
1QEY
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BU of 1qey by Molmil
NMR Structure Determination of the Tetramerization Domain of the MNT Repressor: An Asymmetric A-Helical Assembly in Slow Exchange
Descriptor: PROTEIN (REGULATORY PROTEIN MNT)
Authors:Nooren, I.M.A, George, A.V.E, Kaptein, R, Sauer, R.T, Boelens, R.
Deposit date:1999-04-03
Release date:1999-08-18
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The tetramerization domain of the Mnt repressor consists of two right-handed coiled coils.
Nat.Struct.Biol., 6, 1999
1TF6
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BU of 1tf6 by Molmil
CO-CRYSTAL STRUCTURE OF XENOPUS TFIIIA ZINC FINGER DOMAIN BOUND TO THE 5S RIBOSOMAL RNA GENE INTERNAL CONTROL REGION
Descriptor: DNA (5'-D(*AP*CP*GP*GP*GP*CP*CP*TP*GP*GP*TP*TP*AP*GP*TP*AP*C P*CP*TP*GP*GP*AP* TP*GP*GP*GP*AP*GP*AP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*TP*CP*TP*CP*CP*CP*AP*TP*CP*CP*AP*GP*GP*T P*AP*CP*TP*AP*AP* CP*CP*AP*GP*GP*CP*CP*CP*G)-3'), PROTEIN (TRANSCRIPTION FACTOR IIIA), ...
Authors:Nolte, R.T, Conlin, R.M, Harrison, S.C, Brown, R.S.
Deposit date:1998-03-02
Release date:1998-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Differing roles for zinc fingers in DNA recognition: structure of a six-finger transcription factor IIIA complex.
Proc.Natl.Acad.Sci.USA, 95, 1998
1T2Y
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NMR solution structure of the protein part of Cu6-Neurospora crassa MT
Descriptor: Metallothionein
Authors:Cobine, P.A, McKay, R.T, Zangger, K, Dameron, C.T, Armitage, I.M.
Deposit date:2004-04-23
Release date:2004-11-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of Cu metallothionein from the fungus Neurospora crassa
Eur.J.Biochem., 271, 2004
1U24
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Crystal structure of Selenomonas ruminantium phytase
Descriptor: myo-inositol hexaphosphate phosphohydrolase
Authors:Chu, H.M, Guo, R.T, Lin, T.W, Chou, C.C, Shr, H.L, Lai, H.L, Tang, T.Y, Cheng, K.J, Selinger, B.L, Wang, A.H.-J.
Deposit date:2004-07-16
Release date:2004-11-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Selenomonas ruminantium Phytase in Complex with Persulfated Phytate; DSP Phytase Fold and Mechanism for Sequential Substrate Hydrolysis
STRUCTURE, 12, 2004
1VG2
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Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima A76Y mutant
Descriptor: octoprenyl-diphosphate synthase
Authors:Guo, R.T, Kuo, C.J, Ko, T.P, Chou, C.C, Liang, P.H, Wang, A.H.-J.
Deposit date:2004-04-23
Release date:2004-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A molecular ruler for chain elongation catalyzed by octaprenyl pyrophosphate synthase and its structure-based engineering to produce unprecedented long chain trans-prenyl products
Biochemistry, 43, 2004
1TNS
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A NOVEL CLASS OF WINGED HELIX-TURN-HELIX PROTEIN: THE DNA-BINDING DOMAIN OF MU TRANSPOSASE
Descriptor: MU-TRANSPOSASE
Authors:Clore, G.M, Clubb, R.T, Omichinski, J.G, Gronenborn, A.M.
Deposit date:1994-10-10
Release date:1995-02-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A novel class of winged helix-turn-helix protein: the DNA-binding domain of Mu transposase.
Structure, 2, 1994
1TNT
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A NOVEL CLASS OF WINGED HELIX-TURN-HELIX PROTEIN: THE DNA-BINDING DOMAIN OF MU TRANSPOSASE
Descriptor: MU-TRANSPOSASE
Authors:Clore, G.M, Clubb, R.T, Omichinski, J.G, Gronenborn, A.M.
Deposit date:1994-10-10
Release date:1995-02-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A novel class of winged helix-turn-helix protein: the DNA-binding domain of Mu transposase.
Structure, 2, 1994
1VG6
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Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima F132A/L128A/I123A mutant
Descriptor: octoprenyl-diphosphate synthase
Authors:Guo, R.T, Kuo, C.J, Ko, T.P, Chou, C.C, Liang, P.H, Wang, A.H.-J.
Deposit date:2004-04-23
Release date:2004-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:A molecular ruler for chain elongation catalyzed by octaprenyl pyrophosphate synthase and its structure-based engineering to produce unprecedented long chain trans-prenyl products
Biochemistry, 43, 2004
1NNS
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L-asparaginase of E. coli in C2 space group and 1.95 A resolution
Descriptor: ASPARTIC ACID, L-asparaginase II
Authors:Sanches, M, Barbosa, J.A.R.G, de Oliveira, R.T, Neto, J.A.A, Polikarpov, I.
Deposit date:2003-01-14
Release date:2003-03-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural comparison of Escherichia coli L-asparaginase in two monoclinic space groups.
Acta Crystallogr.,Sect.D, 59, 2003
1MYK
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CRYSTAL STRUCTURE, FOLDING, AND OPERATOR BINDING OF THE HYPERSTABLE ARC REPRESSOR MUTANT PL8
Descriptor: ARC REPRESSOR
Authors:Schildbach, J.F, Milla, M.E, Jeffrey, P.D, Raumann, B.E, Sauer, R.T.
Deposit date:1994-10-12
Release date:1995-01-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure, folding, and operator binding of the hyperstable Arc repressor mutant PL8.
Biochemistry, 34, 1995

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