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PDB: 924 results

1X6X
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Structure 2: cryocolled crystal structure of the truncated pak pilin from Pseudomonas aeruginosa at 0.95A resolution
Descriptor: Fimbrial protein
Authors:Dunlop, K.V, Irvin, R.T, Hazes, B.
Deposit date:2004-08-12
Release date:2005-04-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Pros and cons of cryocrystallography: should we also collect a room-temperature data set?
Acta Crystallogr.,Sect.D, 61, 2005
1X6Y
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Structure 6: room temperature crystal structure of the truncated pak pilin from Pseudomonas aeruginosa at 1.80A resolution
Descriptor: Fimbrial protein
Authors:Dunlop, K.V, Irvin, R.T, Hazes, B.
Deposit date:2004-08-12
Release date:2005-04-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Pros and cons of cryocrystallography: should we also collect a room-temperature data set?
Acta Crystallogr.,Sect.D, 61, 2005
1VWF
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STREPTAVIDIN COMPLEXED WITH CYCLO-AC-[CHPQGPPC]-NH2 MONOMER, PH 3.67
Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T.
Deposit date:1997-03-03
Release date:1998-03-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0.
J.Biol.Chem., 272, 1997
1VWB
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STREPTAVIDIN-CYCLO-AC-[CHPQFC]-NH2, PH 11.8
Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T.
Deposit date:1997-03-03
Release date:1998-03-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0.
J.Biol.Chem., 272, 1997
1JQF
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Human Transferrin N-Lobe Mutant H249Q
Descriptor: CARBONATE ION, FE (III) ION, POTASSIUM ION, ...
Authors:Baker, H.M, Mason, A.B, He, Q.-Y, MacGillivray, R.T.A, Baker, E.N.
Deposit date:2001-08-06
Release date:2001-10-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Ligand variation in the transferrin family: the crystal structure of the H249Q mutant of the human transferrin N-lobe as a model for iron binding in insect transferrins.
Biochemistry, 40, 2001
3NPQ
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Structure of the S-adenosylhomocysteine riboswitch at 2.18 A
Descriptor: COBALT HEXAMMINE(III), S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLHOMOCYSTEINE RIBOSWITCH
Authors:Reyes, F.E, Edwards, A.E, Batey, R.T.
Deposit date:2010-06-28
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1814 Å)
Cite:Structural basis for recognition of S-adenosylhomocysteine by riboswitches.
Rna, 16, 2010
3O2H
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E. coli ClpS in complex with a Leu N-end rule peptide
Descriptor: ATP-dependent Clp protease adaptor protein ClpS, DNA protection during starvation protein
Authors:Roman-Hernandez, G, Grant, R.A, Sauer, R.T, Baker, T.A, de Regt, A.
Deposit date:2010-07-22
Release date:2011-12-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The ClpS adaptor mediates staged delivery of N-end rule substrates to the AAA+ ClpAP protease.
Mol.Cell, 43, 2011
3O2O
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Structure of E. coli ClpS ring complex
Descriptor: ATP-dependent Clp protease adaptor protein ClpS
Authors:Roman-Hernandez, G, Grant, R.A, Sauer, R.T, Baker, T.A, de Regt, A.
Deposit date:2010-07-22
Release date:2011-12-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The ClpS adaptor mediates staged delivery of N-end rule substrates to the AAA+ ClpAP protease.
Mol.Cell, 43, 2011
3NPN
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Structure of the s-adenosylhomocysteine riboswitch at 3.0A
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLHOMOCYSTEINE RIBOSWITCH
Authors:Reyes, F.E, Edwards, A.E, Batey, R.T.
Deposit date:2010-06-28
Release date:2010-10-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.792 Å)
Cite:Structural basis for recognition of S-adenosylhomocysteine by riboswitches.
Rna, 16, 2010
3QZ0
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Structure of Treponema denticola Factor H Binding protein (FhbB), selenomethionine derivative
Descriptor: Factor H binding protein, GLYCEROL, THIOCYANATE ION
Authors:Miller, D.P, McDowell, J.V, Heroux, A, Bell, J.K, Marconi, R.T, Conrad, D.H, Burgner, J.W.
Deposit date:2011-03-04
Release date:2012-03-07
Last modified:2012-06-20
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure of factor H-binding protein B (FhbB) of the periopathogen, Treponema denticola: insights into progression of periodontal disease.
J.Biol.Chem., 287, 2012
3RSD
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STRUCTURE OF THE D121N VARIANT OF RIBONUCLEASE A
Descriptor: RIBONUCLEASE A
Authors:Schultz, L.W, Quirk, D.J, Raines, R.T.
Deposit date:1998-02-05
Release date:1998-07-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:His...Asp catalytic dyad of ribonuclease A: structure and function of the wild-type, D121N, and D121A enzymes.
Biochemistry, 37, 1998
3R15
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Structure Treponema Denticola Factor H Binding Protein
Descriptor: Factor H binding protein, THIOCYANATE ION
Authors:Miller, D.P, McDowell, J.V, Burgner, J, Heroux, A, Bell, J.K, Marconi, R.T.
Deposit date:2011-03-09
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Structure Treponema Denticola Factor H Binding Protein
To be Published
3QTL
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Structural Basis for Dual-inhibition Mechanism of a Non-classical Kazal-type Serine Protease Inhibitor from Horseshoe Crab in Complex with Subtilisin
Descriptor: Kazal-type serine protease inhibitor SPI-1, Subtilisin-like serin protease
Authors:Shenoy, R.T, Sivaraman, J.
Deposit date:2011-02-23
Release date:2011-06-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for dual-inhibition mechanism of a non-classical kazal-type serine protease inhibitor from horseshoe crab in complex with subtilisin.
Plos One, 6, 2011
3OTP
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Crystal structure of the DegP dodecamer with a model substrate
Descriptor: Lysozyme C, Protease do
Authors:Kim, S, Grant, R.A, Sauer, R.T.
Deposit date:2010-09-13
Release date:2011-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.76 Å)
Cite:Covalent Linkage of Distinct Substrate Degrons Controls Assembly and Disassembly of DegP Proteolytic Cages.
Cell(Cambridge,Mass.), 145, 2011
3RSK
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STRUCTURE OF THE K7A/R10A/K66A VARIANT OF RIBONUCLEASE A
Descriptor: ACETATE ION, RIBONUCLEASE A
Authors:Schultz, L.W, Fisher, B.M, Raines, R.T.
Deposit date:1998-04-09
Release date:1998-07-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Coulombic Effects of Remote Subsites on the Active Site of Ribonuclease A
Biochemistry, 37, 1998
3RSP
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STRUCTURE OF THE P93G VARIANT OF RIBONUCLEASE A
Descriptor: CHLORIDE ION, RIBONUCLEASE A
Authors:Schultz, L.W, Hargraves, S.R, Klink, T.A, Raines, R.T.
Deposit date:1997-10-20
Release date:1998-04-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and stability of the P93G variant of ribonuclease A.
Protein Sci., 7, 1998
3OU0
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re-refined 3CS0
Descriptor: Periplasmic serine endoprotease DegP, heptapeptide, pentapeptide
Authors:Sauer, R.T, Grant, R.A, Kim, S.
Deposit date:2010-09-14
Release date:2011-01-19
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Covalent Linkage of Distinct Substrate Degrons Controls Assembly and Disassembly of DegP Proteolytic Cages.
Cell(Cambridge,Mass.), 145, 2011
3OF8
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BU of 3of8 by Molmil
Structural Basis for Reversible and Irreversible Inhibition of Human Cathepsin L by their Respective Dipeptidyl Glyoxal and Diazomethylketone Inhibitors
Descriptor: Cathepsin L1, Nalpha-[(benzyloxy)carbonyl]-N-[(2S)-1-(4-tert-butoxyphenyl)-4-hydroxy-3-oxobutan-2-yl]-L-phenylalaninamide
Authors:Shenoy, R.T, Sivaraman, J.
Deposit date:2010-08-14
Release date:2010-12-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for reversible and irreversible inhibition of human cathepsin L by their respective dipeptidyl glyoxal and diazomethylketone inhibitors.
J.Struct.Biol., 173, 2011
3OF9
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Structural Basis for Irreversible Inhibition of Human Cathepsin L by a Diazomethylketone Inhibitor
Descriptor: Cathepsin L1, Nalpha-[(benzyloxy)carbonyl]-N-[(1S)-1-(4-tert-butoxybenzyl)-3-diazo-2-oxopropyl]-L-phenylalaninamide
Authors:Shenoy, R.T, Sivaraman, J.
Deposit date:2010-08-14
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.761 Å)
Cite:Structural basis for reversible and irreversible inhibition of human cathepsin L by their respective dipeptidyl glyoxal and diazomethylketone inhibitors.
J.Struct.Biol., 173, 2011
3SD3
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The structure of the tetrahydrofolate riboswitch containing a U25C mutation
Descriptor: IRIDIUM HEXAMMINE ION, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, Tetrahydrofolate riboswitch
Authors:Reyes, F.E, Trausch, J.J, Ceres, P, Batey, R.T.
Deposit date:2011-06-08
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The structure of a tetrahydrofolate-sensing riboswitch reveals two ligand binding sites in a single aptamer.
Structure, 19, 2011
1SDL
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CROSS-LINKED, CARBONMONOXY HEMOGLOBIN A
Descriptor: 1,3,5-BENZENETRICARBOXYLIC ACID, CARBON MONOXIDE, HEMOGLOBIN A, ...
Authors:Schumacher, M.A, Dixon, M.M, Kluger, R, Jones, R.T, Brennan, R.G.
Deposit date:1996-02-26
Release date:1996-08-01
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Allosteric transition intermediates modelled by crosslinked haemoglobins.
Nature, 375, 1995
3DDW
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Crystal structure of glycogen phosphorylase complexed with an anthranilimide based inhibitor GSK055
Descriptor: (2S)-{[(3-{[(2-chloro-6-methylphenyl)carbamoyl]amino}naphthalen-2-yl)carbonyl]amino}(phenyl)ethanoic acid, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Nolte, R.T.
Deposit date:2008-06-06
Release date:2009-01-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Anthranilimide based glycogen phosphorylase inhibitors for the treatment of type 2 diabetes. Part 3: X-ray crystallographic characterization, core and urea optimization and in vivo efficacy.
Bioorg.Med.Chem.Lett., 19, 2009
3DDS
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Crystal structure of glycogen phosphorylase complexed with an anthranilimide based inhibitor GSK261
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CAFFEINE, ...
Authors:Nolte, R.T.
Deposit date:2008-06-06
Release date:2009-01-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Anthranilimide based glycogen phosphorylase inhibitors for the treatment of type 2 diabetes. Part 3: X-ray crystallographic characterization, core and urea optimization and in vivo efficacy.
Bioorg.Med.Chem.Lett., 19, 2009
3CJF
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Crystal structure of VEGFR2 in complex with a 3,4,5-trimethoxy aniline containing pyrimidine
Descriptor: N~4~-(3-methyl-1H-indazol-6-yl)-N~2~-(3,4,5-trimethoxyphenyl)pyrimidine-2,4-diamine, SULFATE ION, Vascular endothelial growth factor receptor 2
Authors:Nolte, R.T.
Deposit date:2008-03-12
Release date:2008-10-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Discovery of 5-[[4-[(2,3-dimethyl-2H-indazol-6-yl)methylamino]-2-pyrimidinyl]amino]-2-methyl-benzenesulfonamide (Pazopanib), a novel and potent vascular endothelial growth factor receptor inhibitor.
J.Med.Chem., 51, 2008
1TXX
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ACTIVE-SITE VARIANT OF E.COLI THIOREDOXIN
Descriptor: COPPER (II) ION, PROTEIN (THIOREDOXIN)
Authors:Schultz, L.W, Chivers, P.T, Raines, R.T.
Deposit date:1999-04-07
Release date:1999-09-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The CXXC motif: crystal structure of an active-site variant of Escherichia coli thioredoxin.
Acta Crystallogr.,Sect.D, 55, 1999

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