Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1595 件

6NAX
DownloadVisualize
BU of 6nax by Molmil
Olfactomedin domain of mouse myocilin
分子名称: CALCIUM ION, GLYCEROL, Myocilin, ...
著者Patterson-Orazem, A.C, Hill, S.E, Lieberman, R.L.
登録日2018-12-06
公開日2019-03-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Differential Misfolding Properties of Glaucoma-Associated Olfactomedin Domains from Humans and Mice.
Biochemistry, 58, 2019
5L12
DownloadVisualize
BU of 5l12 by Molmil
Crystal structure of 2C-methyl-D-erythritol 2,4-clycodiphosphate synthase from BURKHOLDERIA PSEUDOMALLEI double mutant
分子名称: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, ZINC ION
著者Blain, J.M, Raneiri, G, Walter, R.L, Hagen, T.J, Horn, J.R.
登録日2016-07-28
公開日2017-11-01
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.716 Å)
主引用文献Enzyme Engineering for the Development of a High-Throughput Temperature Screen of Burkholderia pseudomallei IspF Inhibitors
To Be Published
6Q5S
DownloadVisualize
BU of 6q5s by Molmil
Crystal structure of a de novo designed antiparallel four-helix coiled coil apCC-Tet
分子名称: apCC-Tet
著者Beesley, J.L, Guto, G.R, Wood, C.W, Brady, R.L, Woolfson, D.N.
登録日2018-12-09
公開日2019-05-22
最終更新日2019-06-19
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Navigating the Structural Landscape of De Novo alpha-Helical Bundles.
J.Am.Chem.Soc., 141, 2019
6NIZ
DownloadVisualize
BU of 6niz by Molmil
Atomic structure of a fluorescent Ag8 cluster templated by a multistranded DNA scaffold
分子名称: DNA (5'-D(*AP*AP*CP*CP*CP*CP)-3'), SILVER ION
著者Lieberman, R.L, Huard, D.J.E.
登録日2019-01-02
公開日2019-01-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (0.93 Å)
主引用文献Atomic Structure of a Fluorescent Ag8Cluster Templated by a Multistranded DNA Scaffold.
J.Am.Chem.Soc., 141, 2019
5KZ9
DownloadVisualize
BU of 5kz9 by Molmil
Crystal structure of the Rous sarcoma virus matrix protein.
分子名称: Virus Matrix Protein
著者Kingston, R.L, Dalton, A.K, Vogt, V.M.
登録日2016-07-24
公開日2017-07-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Cholesterol Promotes Protein Binding by Affecting Membrane Electrostatics and Solvation Properties.
Biophys. J., 113, 2017
5KZB
DownloadVisualize
BU of 5kzb by Molmil
Crystal structure of the Rous sarcoma virus matrix protein (aa 2-102). Space group I4122
分子名称: Virus Matrix Protein
著者Kingston, R.L, Chan, J, Vogt, V.M.
登録日2016-07-24
公開日2017-07-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Cholesterol Promotes Protein Binding by Affecting Membrane Electrostatics and Solvation Properties.
Biophys. J., 113, 2017
6TOF
DownloadVisualize
BU of 6tof by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 4
分子名称: 1,2-ETHANEDIOL, 2-[(1,3-dimethyl-2-oxidanylidene-benzimidazol-5-yl)amino]pyridine-3-carbonitrile, ALA-TRP-VAL-ILE-PRO-ALA, ...
著者Shetty, K, Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
登録日2019-12-11
公開日2020-04-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
6TOK
DownloadVisualize
BU of 6tok by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 23d
分子名称: 1,2-ETHANEDIOL, 5-[[5-chloranyl-2-(3,5-dimethylpyrazol-1-yl)pyrimidin-4-yl]amino]-1-methyl-3-(3-methyl-3-oxidanyl-butyl)benzimidazol-2-one, ALA-TRP-VAL-ILE-PRO-ALA, ...
著者Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
登録日2019-12-11
公開日2020-04-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
5KTV
DownloadVisualize
BU of 5ktv by Molmil
Mis-pairing of unnatural base Z-G DNA duplex at pH 8.5
分子名称: CALCIUM ION, DNA (5'-D(P*GP*CP*GP*AP*AP*TP*TP*(1W5)P*GP*CP*G)-3')
著者Ahmad Sobri, A.F, Brady, R.L.
登録日2016-07-12
公開日2017-05-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural Basis of the Mispairing of an Artificially Expanded Genetic Information System
Chemistry, 2017
6TON
DownloadVisualize
BU of 6ton by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 25b
分子名称: 1,2-ETHANEDIOL, 5-[[5-chloranyl-2-(2,2,6,6-tetramethylmorpholin-4-yl)pyrimidin-4-yl]amino]-1-methyl-3-(3-methyl-3-oxidanyl-butyl)benzimidazol-2-one, ALA-TRP-VAL-ILE-PRO-ALA, ...
著者Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
登録日2019-12-11
公開日2020-04-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
6TOI
DownloadVisualize
BU of 6toi by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 11f
分子名称: 1,2-ETHANEDIOL, 2-chloranyl-4-[[1-methyl-3-[(3~{R})-3-oxidanylbutyl]-2-oxidanylidene-benzimidazol-5-yl]amino]pyridine-3-carbonitrile, ALA-TRP-VAL-ILE-PRO-ALA, ...
著者Collie, G.W, Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
登録日2019-12-11
公開日2020-04-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
6TOO
DownloadVisualize
BU of 6too by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 11a
分子名称: 1,2-ETHANEDIOL, 2-chloranyl-4-[[1-methyl-3-[(2~{S})-2-oxidanylbutyl]-2-oxidanylidene-benzimidazol-5-yl]amino]pyridine-3-carbonitrile, ALA-TRP-VAL-ILE-PRO-ALA, ...
著者Collie, G.W, Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
登録日2019-12-11
公開日2020-04-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
2QYQ
DownloadVisualize
BU of 2qyq by Molmil
Human raf kinase inhibitor protein (rkip) in complex with o-phosphotyrosine
分子名称: O-PHOSPHOTYROSINE, Phosphatidylethanolamine-binding protein 1
著者Simister, P.C, Brady, R.L.
登録日2007-08-15
公開日2008-07-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.948 Å)
主引用文献Phosphotyrosine recognition by the Raf Kinase Inhibitor Protein
Forum Immunopath.Dis.Ther., 2, 2011
7LVZ
DownloadVisualize
BU of 7lvz by Molmil
Crystal structure of ADO
分子名称: 2-aminoethanethiol dioxygenase, CHLORIDE ION, FE (II) ION, ...
著者Bingman, C.A, Fernandez, R.L, Smith, R.W, Fox, B.G, Brunold, T.C.
登録日2021-02-26
公開日2022-01-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献The Crystal Structure of Cysteamine Dioxygenase Reveals the Origin of the Large Substrate Scope of This Vital Mammalian Enzyme.
Biochemistry, 60, 2021
2QSC
DownloadVisualize
BU of 2qsc by Molmil
Crystal structure analysis of anti-HIV-1 V3-Fab F425-B4e8 in complex with a V3-peptide
分子名称: CHLORIDE ION, Envelope glycoprotein gp120, Fab F425-B4e8, ...
著者Bell, C.H, Schiefner, A, Stanfield, R.L, Wilson, I.A.
登録日2007-07-30
公開日2008-01-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of antibody F425-B4e8 in complex with a V3 peptide reveals a new binding mode for HIV-1 neutralization.
J.Mol.Biol., 375, 2008
6UBB
DownloadVisualize
BU of 6ubb by Molmil
Crystal structure of a GH128 (subgroup VI) exo-beta-1,3-glucanase from Aureobasidium namibiae (AnGH128_VI) with laminaribiose at the surface-binding site
分子名称: Glyco_hydro_cc domain-containing protein, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
著者Santos, C.R, Vieira, P.S, Domingues, M.N, Cordeiro, R.L, Tomazini, A, Murakami, M.T.
登録日2019-09-11
公開日2020-05-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Nat.Chem.Biol., 16, 2020
6UCG
DownloadVisualize
BU of 6ucg by Molmil
Retinoic acid receptor-related orphan receptor (ROR) gamma in complex with allosteric compound 28
分子名称: (3S,4R)-1-[1-(2-chloro-6-cyclopropylbenzene-1-carbonyl)-4-fluoro-1H-indazol-3-yl]-3-hydroxypiperidine-4-carboxylic acid, Nuclear receptor ROR-gamma
著者Palte, R.L, Parthasarathy, G.
登録日2019-09-16
公開日2020-03-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Discovery ofN-(Indazol-3-yl)piperidine-4-carboxylic Acids as ROR gamma t Allosteric Inhibitors for Autoimmune Diseases.
Acs Med.Chem.Lett., 11, 2020
6O30
DownloadVisualize
BU of 6o30 by Molmil
Lipid A transporter MsbA from Salmonella typhimurium
分子名称: Lipid A export ATP-binding/permease protein MsbA
著者Padayatti, P.S, Zhang, Q, Wilson, I.A, Lee, S.C, Stanfield, R.L.
登録日2019-02-25
公開日2019-06-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.47 Å)
主引用文献Structural Insights into the Lipid A Transport Pathway in MsbA.
Structure, 27, 2019
4WXU
DownloadVisualize
BU of 4wxu by Molmil
Crystal Structure of the Selenomthionine Incorporated Myocilin Olfactomedin Domain E396D Variant.
分子名称: CALCIUM ION, GLYCEROL, HEXAETHYLENE GLYCOL, ...
著者Donegan, R.K, Freeman, D.M, Lieberman, R.L.
登録日2014-11-14
公開日2015-04-01
実験手法X-RAY DIFFRACTION (2.092 Å)
主引用文献Structural basis for misfolding in myocilin-associated glaucoma.
Hum.Mol.Genet., 24, 2015
2QIH
DownloadVisualize
BU of 2qih by Molmil
Crystal structure of 527-665 fragment of UspA1 protein from Moraxella catarrhalis
分子名称: CHLORIDE ION, PHOSPHATE ION, protein UspA1
著者Conners, R, Brady, R.L.
登録日2007-07-04
公開日2008-05-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.897 Å)
主引用文献The Moraxella adhesin UspA1 binds to its human CEACAM1 receptor by a deformable trimeric coiled-coil.
Embo J., 27, 2008
3SJP
DownloadVisualize
BU of 3sjp by Molmil
Structural characterization of a GII.4 2004 norovirus variant (TCH05)
分子名称: Capsid, ZINC ION
著者Shanker, S, Choi, J.-M, Sankaran, B, Atmar, R.L, Estes, M.K, Prasad, B.V.V.
登録日2011-06-21
公開日2011-07-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.004 Å)
主引用文献Structural Analysis of Histo-Blood Group Antigen Binding Specificity in a Norovirus GII.4 Epidemic Variant: Implications for Epochal Evolution.
J.Virol., 85, 2011
6UB8
DownloadVisualize
BU of 6ub8 by Molmil
Crystal structure of a GH128 (subgroup VI) exo-beta-1,3-glucanase from Aureobasidium namibiae (AnGH128_VI)
分子名称: GLYCEROL, Glyco_hydro_cc domain-containing protein
著者Santos, C.R, Vieira, P.S, Domingues, M.N, Cordeiro, R.L, Tomazini, A, Murakami, M.T.
登録日2019-09-11
公開日2020-05-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Nat.Chem.Biol., 16, 2020
3SEI
DownloadVisualize
BU of 3sei by Molmil
Crystal Structure of Caskin1 Tandem SAMs
分子名称: CHLORIDE ION, Caskin-1, SULFATE ION
著者Stafford, R.L, Bowie, J.U.
登録日2011-06-10
公開日2011-12-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Tandem SAM domain structure of human Caskin1: a presynaptic, self-assembling scaffold for CASK.
Structure, 19, 2011
6ULL
DownloadVisualize
BU of 6ull by Molmil
BshB from Bacillus subtilis complexed with a substrate analogue
分子名称: (2S)-2-({2-deoxy-2-[(hydroxycarbamoyl)amino]-alpha-D-glucopyranosyl}oxy)butanedioic acid, N-acetyl-alpha-D-glucosaminyl L-malate deacetylase 1, SULFATE ION, ...
著者Cook, P.D, Castleman, M.M, Woodward, R.L.
登録日2019-10-08
公開日2020-01-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献X-ray crystallographic structure of BshB, the zinc-dependent deacetylase involved in bacillithiol biosynthesis.
Protein Sci., 29, 2020
6OKB
DownloadVisualize
BU of 6okb by Molmil
Prohead 2 of the phage T5
分子名称: Major capsid protein
著者Huet, A, Duda, R.L, Boulanger, P, Conway, J.F.
登録日2019-04-12
公開日2019-10-02
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (6.7 Å)
主引用文献Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 116, 2019

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon