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PDB: 2325 results

2JVK
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NMR Solution Structure of the Hyper-Sporulation Response Regulator Spo0F Mutant L66A from Bacillus subtilis
Descriptor: Sporulation initiation phosphotransferase F
Authors:Bobay, B.G, McLaughlin, P.D, Thompson, R.J, Hoch, J.A, Cavanagh, J.
Deposit date:2007-09-20
Release date:2008-02-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Covariance identifies dynamic residues at the interfaces in protein/protein complexes
To be Published
1FFH
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N AND GTPASE DOMAINS OF THE SIGNAL SEQUENCE RECOGNITION PROTEIN FFH FROM THERMUS AQUATICUS
Descriptor: FFH, MAGNESIUM ION
Authors:Freymann, D.M, Keenan, R.J, Stroud, R.M, Walter, P.
Deposit date:1996-12-30
Release date:1997-12-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of the conserved GTPase domain of the signal recognition particle.
Nature, 385, 1997
4KS4
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Influenza Neuraminidase in complex with antiviral compound (3S,4R,5R)-4-(acetylamino)-3-{4-[(1R)-1-hydroxypropyl]-1H-1,2,3-triazol-1-yl}-5-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid
Descriptor: (3S,4R,5R)-4-(acetylamino)-3-{4-[(1R)-1-hydroxypropyl]-1H-1,2,3-triazol-1-yl}-5-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, CALCIUM ION, Neuraminidase
Authors:Kerry, P.S, Russell, R.J.M.
Deposit date:2013-05-17
Release date:2013-10-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:Structural basis for a class of nanomolar influenza A neuraminidase inhibitors.
Sci Rep, 3, 2013
1FDL
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CRYSTALLOGRAPHIC REFINEMENT OF THE THREE-DIMENSIONAL STRUCTURE OF THE FAB D1.3-LYSOZYME COMPLEX AT 2.5-ANGSTROMS RESOLUTION
Descriptor: HEN EGG WHITE LYSOZYME, IGG1-KAPPA D1.3 FAB (HEAVY CHAIN), IGG1-KAPPA D1.3 FAB (LIGHT CHAIN)
Authors:Fischmann, T.O, Poljak, R.J.
Deposit date:1990-08-27
Release date:1991-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic refinement of the three-dimensional structure of the FabD1.3-lysozyme complex at 2.5-A resolution.
J.Biol.Chem., 266, 1991
1G80
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NMR SOLUTION STRUCTURE OF D(GCGTACGC)2
Descriptor: 5'-D(*GP*CP*GP*TP*AP*CP*GP*C)-3'
Authors:Isaacs, R.J, Spielmann, H.P.
Deposit date:2000-11-15
Release date:2001-03-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Relationship of DNA structure to internal dynamics: correlation of helical parameters from NOE-based NMR solution structures of d(GCGTACGC)(2) and d(CGCTAGCG)(2) with (13)C order parameters implies conformational coupling in dinucleotide units.
J.Mol.Biol., 307, 2001
2JTE
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Third SH3 domain of CD2AP
Descriptor: CD2-associated protein
Authors:van Nuland, N.A.J, Ortega, R.J, Romero Romero, M, Ab, E, Ora, A, Lopez, M.O, Azuaga, A.I.
Deposit date:2007-07-28
Release date:2007-12-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The high resolution NMR structure of the third SH3 domain of CD2AP.
J.Biomol.Nmr, 39, 2007
1CDD
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BU of 1cdd by Molmil
STRUCTURES OF APO AND COMPLEXED ESCHERICHIA COLI GLYCINAMIDE RIBONUCLEOTIDE TRANSFORMYLASE
Descriptor: PHOSPHATE ION, PHOSPHORIBOSYL-GLYCINAMIDE FORMYLTRANSFERASE
Authors:Almassy, R.J, Janson, C.A, Kan, C.-C, Hostomska, Z.
Deposit date:1992-05-15
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of apo and complexed Escherichia coli glycinamide ribonucleotide transformylase.
Proc.Natl.Acad.Sci.USA, 89, 1992
4K2I
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BU of 4k2i by Molmil
Crystal structure of ntda from bacillus subtilis with bound cofactor pmp
Descriptor: 1,2-ETHANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ACETATE ION, ...
Authors:Van Straaten, K.E, Palmer, D.R.J, Sanders, D.A.R.
Deposit date:2013-04-09
Release date:2013-10-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.225 Å)
Cite:The Structure of NtdA, a Sugar Aminotransferase Involved in the Kanosamine Biosynthetic Pathway in Bacillus subtilis, Reveals a New Subclass of Aminotransferases.
J.Biol.Chem., 288, 2013
1BQG
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BU of 1bqg by Molmil
THE STRUCTURE OF THE D-GLUCARATE DEHYDRATASE PROTEIN FROM PSEUDOMONAS PUTIDA
Descriptor: D-GLUCARATE DEHYDRATASE
Authors:Gulick, A.M, Palmer, D.R.J, Babbitt, P.C, Gerlt, J.A, Rayment, I.
Deposit date:1998-08-15
Release date:1999-05-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evolution of enzymatic activities in the enolase superfamily: crystal structure of (D)-glucarate dehydratase from Pseudomonas putida.
Biochemistry, 37, 1998
1EVU
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BU of 1evu by Molmil
HUMAN FACTOR XIII WITH CALCIUM BOUND IN THE ION SITE
Descriptor: CALCIUM ION, COAGULATION FACTOR XIII, S-1,2-PROPANEDIOL
Authors:Garzon, R.J, Pratt, K.P, Bishop, P.D, Le Trong, I, Stenkamp, R.E, Teller, D.C.
Deposit date:2000-04-20
Release date:2000-05-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Tryptophan 279 is Essential for the Transglutaminase Activity of Coagulation Factor XIII: Functional and Structural Characterization
To Be Published
1F16
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SOLUTION STRUCTURE OF A PRO-APOPTOTIC PROTEIN BAX
Descriptor: PROTEIN (APOPTOSIS REGULATOR BAX, MEMBRANE ISOFORM ALPHA)
Authors:Suzuki, M, Youle, R.J, Tjandra, N.
Deposit date:2000-05-18
Release date:2000-11-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of Bax: coregulation of dimer formation and intracellular localization.
Cell(Cambridge,Mass.), 103, 2000
2JVJ
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NMR Solution Structure of the Hyper-Sporulation Response Regulator Spo0F Mutant I90A from Bacillus subtilis
Descriptor: Sporulation initiation phosphotransferase F
Authors:Bobay, B.G, McLaughlin, P.D, Thompson, R.J, Hoch, J.A, Cavanagh, J.
Deposit date:2007-09-20
Release date:2008-02-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Covariance identifies dynamic residues at the interfaces in protein/protein complexes
To be Published
1FVT
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BU of 1fvt by Molmil
THE STRUCTURE OF CYCLIN-DEPENDENT KINASE 2 (CDK2) IN COMPLEX WITH AN OXINDOLE INHIBITOR
Descriptor: 4-[(2Z)-2-(5-bromo-2-oxo-1,2-dihydro-3H-indol-3-ylidene)hydrazinyl]benzene-1-sulfonamide, CELL DIVISION PROTEIN KINASE 2
Authors:Davis, S.T, Benson, B.G, Bramson, H.N, Chapman, D.E, Dickerson, S.H, Dold, K.M, Eberwein, D.J, Edelstein, M, Frye, S.V, Gampe Jr, R.T, Griffin, R.J, Harris, P.A, Hassell, A.M, Holmes, W.D, Hunter, R.N, Knick, V.B, Lackey, K, Lovejoy, B, Luzzio, M.J, Murray, D, Parker, P, Rocque, W.J, Shewchuk, L, Veal, J.M, Walker, D.H, Kuyper, L.K.
Deposit date:2000-09-20
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Prevention of chemotherapy-induced alopecia in rats by CDK inhibitors.
Science, 291, 2001
1G5X
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BU of 1g5x by Molmil
The Structure of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase I
Descriptor: BETA-KETOACYL ACYL CARRIER PROTEIN SYNTHASE I
Authors:Zhang, Y.M, Rao, M.S, Heath, R.J, Price, A.C, Olson, A.J, Rock, C.O, White, S.W.
Deposit date:2000-11-02
Release date:2000-11-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Identification and analysis of the acyl carrier protein (ACP) docking site on beta-ketoacyl-ACP synthase III.
J.Biol.Chem., 276, 2001
2JVI
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BU of 2jvi by Molmil
NMR Solution Structure of the Hyper-Sporulation Response Regulator Spo0F Mutant H101A from Bacillus subtilis
Descriptor: Sporulation initiation phosphotransferase F
Authors:Bobay, B.G, McLaughlin, P.D, Thompson, R.J, Hoch, J.A, Cavanagh, J.
Deposit date:2007-09-20
Release date:2008-02-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Covariance identifies dynamic residues at the interfaces in protein/protein complexes
To be Published
1BP6
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BU of 1bp6 by Molmil
THYMIDYLATE SYNTHASE R23I, R179T DOUBLE MUTANT
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, POTASSIUM ION, PROTEIN (THYMIDYLATE SYNTHASE)
Authors:Morse, R.J, Finer-Moore, J.S, Stroud, R.M.
Deposit date:1998-08-13
Release date:1998-08-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Energetic contributions of four arginines to phosphate-binding in thymidylate synthase are more than additive and depend on optimization of "effective charge balance".
Biochemistry, 39, 2000
1C3D
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BU of 1c3d by Molmil
X-RAY CRYSTAL STRUCTURE OF C3D: A C3 FRAGMENT AND LIGAND FOR COMPLEMENT RECEPTOR 2
Descriptor: C3D, GLYCEROL
Authors:Nagar, B, Jones, R.G, Diefenbach, R.J, Isenman, D.E, Rini, J.M.
Deposit date:1998-05-19
Release date:1998-10-07
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structure of C3d: a C3 fragment and ligand for complement receptor 2.
Science, 280, 1998
1BOQ
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BU of 1boq by Molmil
PRO REGION C-TERMINUS: PROTEASE ACTIVE SITE INTERACTIONS ARE CRITICAL IN CATALYZING THE FOLDING OF ALPHA-LYTIC PROTEASE
Descriptor: PROTEIN (ALPHA-LYTIC PROTEASE), SULFATE ION
Authors:Peters, R.J, Shiau, A.K, Sohl, J.L, Anderson, D.E, Tang, G, Silen, J.L, Agard, D.A.
Deposit date:1998-08-05
Release date:1998-08-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Pro region C-terminus:protease active site interactions are critical in catalyzing the folding of alpha-lytic protease.
Biochemistry, 37, 1998
1GAC
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NMR structure of asymmetric homodimer of a82846b, a glycopeptide antibiotic, complexed with its cell wall pentapeptide fragment
Descriptor: CELL WALL PENTAPEPTIDE, CHLOROORIENTICIN A, vancosamine, ...
Authors:Kline, A.D, Prowse, W.G, Skelton, M.A, Loncharich, R.J.
Deposit date:1995-05-24
Release date:1996-08-17
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Conformation of A82846B, a Glycopeptide Antibiotic, Complexed with its Cell Wall Fragment: An Asymmetric Homodimer Determined Using NMR Spectroscopy.
Biochemistry, 34, 1995
1G5N
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BU of 1g5n by Molmil
ANNEXIN V COMPLEX WITH HEPARIN OLIGOSACCHARIDES
Descriptor: 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, ANNEXIN V, CALCIUM ION
Authors:Capila, I, Heraiz, M.J, Mo, Y.D, Mealy, T.R, Campos, B, Dedman, J.R, Linhardt, R.J, Seaton, B.A.
Deposit date:2000-11-01
Release date:2001-06-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Annexin V--heparin oligosaccharide complex suggests heparan sulfate--mediated assembly on cell surfaces.
Structure, 9, 2001
1FVV
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THE STRUCTURE OF CDK2/CYCLIN A IN COMPLEX WITH AN OXINDOLE INHIBITOR
Descriptor: 4-[(7-OXO-7H-THIAZOLO[5,4-E]INDOL-8-YLMETHYL)-AMINO]-N-PYRIDIN-2-YL-BENZENESULFONAMIDE, CYCLIN A, CYCLIN-DEPENDENT KINASE 2
Authors:Davis, S.T, Benson, B.G, Bramson, H.N, Chapman, D.E, Dickerson, S.H, Dold, K.M, Eberwein, D.J, Edelstein, M, Frye, S.V, Gampe Jr, R.T, Griffin, R.J, Harris, P.A, Hassell, A.M, Holmes, W.D, Hunter, R.N, Knick, V.B, Lackey, K, Lovejoy, B, Luzzio, M.J, Murray, D, Parker, P, Rocque, W.J, Shewchuk, L, Veal, J.M, Walker, D.H, Kuyper, L.K.
Deposit date:2000-09-20
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Prevention of chemotherapy-induced alopecia in rats by CDK inhibitors.
Science, 291, 2001
1G7Z
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BU of 1g7z by Molmil
NMR SOLUTION STRUCTURE OF D(CGCTAGCG)2
Descriptor: 5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3'
Authors:Isaacs, R.J, Spielmann, H.P.
Deposit date:2000-11-15
Release date:2001-03-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Relationship of DNA structure to internal dynamics: correlation of helical parameters from NOE-based NMR solution structures of d(GCGTACGC)(2) and d(CGCTAGCG)(2) with (13)C order parameters implies conformational coupling in dinucleotide units.
J.Mol.Biol., 307, 2001
5JOM
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BU of 5jom by Molmil
X-ray structure of CO-bound sperm whale myoglobin using a fixed target crystallography chip
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Oghbaey, S, Sarracini, A, Ginn, H.M, Pare-Labrosse, O, Kuo, A, Marx, A, Epp, S.W, Sherrell, D.A, Eger, B.T, Zhong, Y, Loch, R, Mariani, V, Alonso-Mori, R, Nelson, S, Lemke, H.T, Owen, R.L, Pearson, A.R, Stuart, D.I, Ernst, O.P, Mueller-Werkmeister, H.M, Miller, R.J.D.
Deposit date:2016-05-02
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fixed target combined with spectral mapping: approaching 100% hit rates for serial crystallography.
Acta Crystallogr D Struct Biol, 72, 2016
3ZXG
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BU of 3zxg by Molmil
lysenin sphingomyelin complex
Descriptor: LYSENIN, SULFATE ION, TRIMETHYL-[2-[[(2S,3S)-2-(OCTADECANOYLAMINO)-3-OXIDANYL-BUTOXY]-OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
Authors:De Colibus, L, Sonnen, A.F.P, Morris, K.J, Siebert, C.A, Abrusci, P, Plitzko, J, Hodnik, V, Leippe, M, Volpi, E, Anderluh, G, Gilbert, R.J.C.
Deposit date:2011-08-10
Release date:2012-09-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Structures of Lysenin Reveal a Shared Evolutionary Origin for Pore-Forming Proteins and its Mode of Sphingomyelin Recognition.
Structure, 20, 2012
5L81
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Crystal structure of the PH domain of murine kindlin-3
Descriptor: Fermitin family homolog 3, SODIUM ION
Authors:Ni, T, Harlos, K, Gilbert, R.J.C.
Deposit date:2016-06-06
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structure and lipid-binding properties of the kindlin-3 pleckstrin homology domain.
Biochem. J., 474, 2017

223532

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