Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27201 results

7Q37
DownloadVisualize
BU of 7q37 by Molmil
Crystal structure of proton pump MAR rhodopsin pressurized with krypton
Descriptor: Bacteriorhodopsin, EICOSANE, HEXANE, ...
Authors:Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A.
Deposit date:2021-10-27
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action.
Commun Biol, 5, 2022
4XFE
DownloadVisualize
BU of 4xfe by Molmil
Crystal structure of a TRAP periplasmic solute binding protein from Pseudomonas putida F1 (Pput_1203), Target EFI-500184, with bound D-glucuronate
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, SULFATE ION, TRAP dicarboxylate transporter subunit DctP, ...
Authors:Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-12-26
Release date:2015-01-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of a TRAP periplasmic solute binding protein from Pseudomonas putida F1 (Pput_1203), Target EFI-500184, with bound D-glucuronate
To be published
7Q38
DownloadVisualize
BU of 7q38 by Molmil
Crystal structure of the mutant bacteriorhodopsin pressurized with argon
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ARGON, Bacteriorhodopsin, ...
Authors:Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A.
Deposit date:2021-10-27
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action.
Commun Biol, 5, 2022
4Y1H
DownloadVisualize
BU of 4y1h by Molmil
Crystal structure of K33 linked tri-Ubiquitin
Descriptor: 1,2-ETHANEDIOL, Ubiquitin-40S ribosomal protein S27a
Authors:Kristariyanto, Y.A, Abdul Rehman, S.A, Choi, S.Y, Ritorto, S, Campbell, D.G, Morrice, N.A, Toth, R, Kulathu, Y.
Deposit date:2015-02-07
Release date:2015-03-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Assembly and structure of Lys33-linked polyubiquitin reveals distinct conformations.
Biochem.J., 467, 2015
6ONF
DownloadVisualize
BU of 6onf by Molmil
Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-III-188-A02.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, clade A/E 93TH057 HIV-1 gp120 core, ...
Authors:Tolbert, W.D, Sherburn, R, Pazgier, M.
Deposit date:2019-04-22
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:A New Family of Small-Molecule CD4-Mimetic Compounds Contacts Highly Conserved Aspartic Acid 368 of HIV-1 gp120 and Mediates Antibody-Dependent Cellular Cytotoxicity.
J.Virol., 93, 2019
6OWZ
DownloadVisualize
BU of 6owz by Molmil
Spy H96L:Im7 L19pI-Phe complex; multiple anomalous datasets contained herein for element identification
Descriptor: CHLORIDE ION, IMIDAZOLE, IODIDE ION, ...
Authors:Rocchio, S, Duman, R, El Omari, K, Mykhaylyk, V, Yan, Z, Wagner, A, Bardwell, J.C.A, Horowitz, S.
Deposit date:2019-05-12
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Identifying dynamic, partially occupied residues using anomalous scattering.
Acta Crystallogr D Struct Biol, 75, 2019
7PGX
DownloadVisualize
BU of 7pgx by Molmil
Structure of dark-adapted AsLOV2 wild type
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Gelfert, R, Weyand, M, Moeglich, A.
Deposit date:2021-08-16
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.001 Å)
Cite:Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine.
Nat Commun, 13, 2022
8QWR
DownloadVisualize
BU of 8qwr by Molmil
Crystal structure of CotB2 variant V80L
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Cyclooctat-9-en-7-ol synthase, ...
Authors:Dimos, N, Himpich, S, Ringel, M, Driller, R, Major, D.T, Brueck, T, Loll, B.
Deposit date:2023-10-20
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of CotB2 variant V80L
To Be Published
8QLF
DownloadVisualize
BU of 8qlf by Molmil
Crystal structure of the light-driven sodium pump ErNaR in the monomeric form at pH 8.8
Descriptor: Bacteriorhodopsin-like protein, EICOSANE, OLEIC ACID
Authors:Kovalev, K, Podoliak, E, Lamm, G.H.U, Astashkin, R, Bourenkov, G.
Deposit date:2023-09-19
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:A subgroup of light-driven sodium pumps with an additional Schiff base counterion.
Nat Commun, 15, 2024
1F4Z
DownloadVisualize
BU of 1f4z by Molmil
BACTERIORHODOPSIN-M PHOTOINTERMEDIATE STATE OF THE E204Q MUTANT AT 1.8 ANGSTROM RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, BACTERIORHODOPSIN, ...
Authors:Luecke, H, Schobert, B, Cartailler, J.P, Richter, H.T, Rosengarth, A, Needleman, R, Lanyi, J.K.
Deposit date:2000-06-10
Release date:2000-08-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Coupling photoisomerization of retinal to directional transport in bacteriorhodopsin.
J.Mol.Biol., 300, 2000
7PGZ
DownloadVisualize
BU of 7pgz by Molmil
Structure of dark-adapted AsLOV2 Q513L
Descriptor: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Gelfert, R, Weyand, M, Moeglich, A.
Deposit date:2021-08-16
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine.
Nat Commun, 13, 2022
7EET
DownloadVisualize
BU of 7eet by Molmil
Mannanase KMAN from Klebsiella oxytoca KUB-CW2-3
Descriptor: Mannanase KMAN, SULFATE ION
Authors:Pongsapipatana, N, Charoenwattanasatien, R, Pramanpol, N, Nitisinprasert, S, Keawsompong, S.
Deposit date:2021-03-19
Release date:2021-11-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Crystallization, structural characterization and kinetic analysis of a GH26 beta-mannanase from Klebsiella oxytoca KUB-CW2-3.
Acta Crystallogr D Struct Biol, 77, 2021
7PH0
DownloadVisualize
BU of 7ph0 by Molmil
Structure of light-adapted AsLOV2 Q513L
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Gelfert, R, Weyand, M, Moeglich, A.
Deposit date:2021-08-16
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.979 Å)
Cite:Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine.
Nat Commun, 13, 2022
6OSU
DownloadVisualize
BU of 6osu by Molmil
Crystal Structure of the D-alanyl-D-alanine carboxypeptidase DacD from Francisella tularensis
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, D-alanyl-D-alanine carboxypeptidase (Penicillin binding protein) family protein
Authors:Kim, Y, Stogios, P, Skarina, T, Di, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-05-02
Release date:2019-05-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Crystal Structure of the D-alanyl-D-alanine carboxypeptidase DacD from Francisella tularensis
To Be Published
1F3E
DownloadVisualize
BU of 1f3e by Molmil
A NEW TARGET FOR SHIGELLOSIS: RATIONAL DESIGN AND CRYSTALLOGRAPHIC STUDIES OF INHIBITORS OF TRNA-GUANINE TRANSGLYCOSYLASE
Descriptor: 3,5-DIAMINOPHTHALHYDRAZIDE, QUEUINE TRNA-RIBOSYLTRANSFERASE, ZINC ION
Authors:Graedler, U, Gerber, H.-D, Goodenough-Lashua, D.M, Garcia, G.A.G, Ficner, R, Reuter, K, Stubbs, M.T, Klebe, G.
Deposit date:2000-06-02
Release date:2000-06-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A new target for shigellosis: rational design and crystallographic studies of inhibitors of tRNA-guanine transglycosylase.
J.Mol.Biol., 306, 2001
4XND
DownloadVisualize
BU of 4xnd by Molmil
Crystal Structure of E. coli Aminopeptidase N in complex with L-Beta Homotryptophan
Descriptor: (3S)-3-AMINO-4-(1H-INDOL-3-YL)BUTANOIC ACID, Aminopeptidase N, GLYCEROL, ...
Authors:Addlagatta, A, Gumpena, R.
Deposit date:2015-01-15
Release date:2016-03-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal Structure of E. coli Aminopeptidase N in complex with L-Beta Homotryptophan
To Be Published
6OTI
DownloadVisualize
BU of 6oti by Molmil
Carbonic Anhydrase IX mimic complexed with ureic benzene sulfonamide MB9-561B
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-hydroxy-3-({[(pyridin-4-yl)methyl]carbamoyl}amino)benzene-1-sulfonamide, Carbonic anhydrase 2, ...
Authors:Kota, A, McKenna, R.
Deposit date:2019-05-03
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Carbonic Anhydrase IX mimic complexed with ureido benzene sulfonamide MB9-561B
To Be Published
6O8Y
DownloadVisualize
BU of 6o8y by Molmil
Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class03
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Jogl, G, Khayat, R.
Deposit date:2019-03-12
Release date:2020-09-23
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis.
Sci Rep, 10, 2020
6OTM
DownloadVisualize
BU of 6otm by Molmil
Carbonic Anhydrase IX mimic complexed with ureic benzene sulfonamide MB10-586B
Descriptor: 4-hydroxy-3-({[2-(pyridin-2-yl)ethyl]carbamoyl}amino)benzene-1-sulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Kota, A, McKenna, R.
Deposit date:2019-05-03
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.307 Å)
Cite:Carbonic Anhydrase IX mimic complexed with ureido benzene sulfonamide MB9-561B
To Be Published
6OTP
DownloadVisualize
BU of 6otp by Molmil
Carbonic Anhydrase II complexed with ureic benzene sulfonamide MB10-586B
Descriptor: 4-hydroxy-3-({[2-(pyridin-2-yl)ethyl]carbamoyl}amino)benzene-1-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Kota, A, McKenna, R.
Deposit date:2019-05-03
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.466 Å)
Cite:Carbonic Anhydrase IX mimic complexed with ureido benzene sulfonamide MB9-561B
To Be Published
4XOD
DownloadVisualize
BU of 4xod by Molmil
Crystal structure of a FimH*DsG complex from E.coli F18
Descriptor: FimG protein, FimH protein
Authors:Jakob, R.P, Sauer, M.M, Glockshuber, R, Maier, T.
Deposit date:2015-01-16
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016
6OUI
DownloadVisualize
BU of 6oui by Molmil
Carbonic Anhydrase IX mimic complexed with benzene sulfonamide MB11-710A
Descriptor: 3-{[(4-hydroxybutyl)carbamoyl]amino}benzene-1-sulfonamide, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
Authors:Kota, A, McKenna, R.
Deposit date:2019-05-04
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.528 Å)
Cite:Carbonic Anhydrase IX mimic complexed with ureido benzene sulfonamide MB11-710A
To Be Published
1F4S
DownloadVisualize
BU of 1f4s by Molmil
STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA
Descriptor: DNA (5'-D(P*CP*GP*TP*GP*CP*GP*GP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*CP*CP*GP*CP*AP*CP*G)-3'), ETHANOL REGULON TRANSCRIPTIONAL FACTOR, ...
Authors:Cahuzac, B, Cerdan, R, Felenbok, B, Guittet, E.
Deposit date:2000-06-09
Release date:2001-09-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of an AlcR-DNA complex sheds light onto the unique tight and monomeric DNA binding of a Zn(2)Cys(6) protein.
Structure, 9, 2001
1F5E
DownloadVisualize
BU of 1f5e by Molmil
STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA
Descriptor: DNA (5'-D(P*CP*GP*TP*GP*CP*GP*GP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*CP*CP*GP*CP*AP*CP*G)-3'), ETHANOL REGULON TRANSCRIPTIONAL FACTOR, ...
Authors:Cahuzac, B, Cerdan, R, Felenbok, B, Guittet, E.
Deposit date:2000-06-14
Release date:2001-09-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of an AlcR-DNA complex sheds light onto the unique tight and monomeric DNA binding of a Zn(2)Cys(6) protein.
Structure, 9, 2001
6OXM
DownloadVisualize
BU of 6oxm by Molmil
Crystal structure of L,L-diaminopimelate aminotransferase (DapL) from Verrucomicrobium spinosum
Descriptor: Diaminopimelate aminotransferase
Authors:Weatherhead, A, Meng, Y, Dobson, R, Hudson, A.
Deposit date:2019-05-13
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Characterization of Diaminopimelate Aminotransferase from Verrucomicrobium Spinosum
To Be Published

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon