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PDB: 27201 件

7F4B
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The crystal structure of the immature apo-enzyme of homoserine dehydrogenase from the hyperthermophilic archaeon Sulfurisphaera tokodaii.
分子名称: MAGNESIUM ION, homoserine dehydrogenase
著者Kurihara, E, Kubota, T, Watanabe, K, Ogata, K, Kaneko, R, Oshima, T, Yoshimune, K, Goto, M.
登録日2021-06-18
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase.
Commun Biol, 5, 2022
6ILK
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Cryo-EM structure of Echovirus 6 complexed with its attachment receptor CD55 at PH 7.4
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Gao, G.F, Liu, S, Zhao, X, Peng, R.
登録日2018-10-18
公開日2019-05-15
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Human Neonatal Fc Receptor Is the Cellular Uncoating Receptor for Enterovirus B.
Cell, 177, 2019
3ZFH
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Crystal structure of Pseudomonas aeruginosa inosine 5'-monophosphate dehydrogenase
分子名称: CHLORIDE ION, INOSINE 5'-MONOPHOSPHATE DEHYDROGENASE
著者Rao, V.A, Shepherd, S.M, Owen, R, Hunter, W.N.
登録日2012-12-11
公開日2013-01-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of Pseudomonas Aeruginosa Inosine 5'-Monophosphate Dehydrogenase
Acta Crystallogr.,Sect.F, 69, 2013
6IDP
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Crystal structure of Vibrio cholerae MATE transporter VcmN in the straight form
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MATE family efflux transporter
著者Kusakizako, T, Claxton, D.P, Tanaka, Y, Maturana, A.D, Kuroda, T, Ishitani, R, Mchaourab, H.S, Nureki, O.
登録日2018-09-11
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter.
Structure, 27, 2019
7F4C
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The crystal structure of the immature holo-enzyme of homoserine dehydrogenase complexed with NADP and 1,4-butandiol from the hyperthermophilic archaeon Sulfurisphaera tokodaii.
分子名称: 1,4-BUTANEDIOL, Homoserine dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Ogata, K, Kaneko, R, Kubota, T, Watanabe, K, Kurihara, E, Oshima, T, Yoshimune, K, Goto, M.
登録日2021-06-18
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase.
Commun Biol, 5, 2022
3ZBJ
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BU of 3zbj by Molmil
Fitting results in the I-layer of the subnanometer structure of the bacterial pKM101 type IV secretion system core complex digested with elastase
分子名称: TRAO PROTEIN
著者Rivera-Calzada, A, Fronzes, R, Savva, C.G, Chandran, V, Lian, P.W, Laeremans, T, Pardon, E, Steyaert, J, Remaut, H, Waksman, G, Orlova, E.V.
登録日2012-11-10
公開日2013-04-03
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (8.5 Å)
主引用文献Structure of a Bacterial Type Iv Secretion Core Complex at Subnanometre Resolution.
Embo J., 32, 2013
3ZKR
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X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) in complex with bromoform
分子名称: CYS-LOOP LIGAND-GATED ION CHANNEL, TRIBROMOMETHANE
著者Spurny, R, Billen, B, Howard, R.J, Brams, M, Debaveye, S, Price, K.L, Weston, D.A, Strelkov, S.V, Tytgat, J, Bertrand, S, Bertrand, D, Lummis, S.C.R, Ulens, C.
登録日2013-01-24
公開日2013-02-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.649 Å)
主引用文献Multisite Binding of a General Anesthetic to the Prokaryotic Pentameric Erwinia Chrysanthemi Ligand-Gated Ion Channel (Elic).
J.Biol.Chem., 288, 2013
4NEF
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BU of 4nef by Molmil
X-ray structure of human Aquaporin 2
分子名称: Aquaporin-2, CADMIUM ION, ZINC ION
著者Frick, A, Eriksson, U, Mattia, F.D, Oberg, F, Hedfalk, K, Neutze, R, Grip, W.D, Deen, P.M.T, Tornroth-horsefield, S.
登録日2013-10-29
公開日2014-04-16
最終更新日2014-12-10
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献X-ray structure of human aquaporin 2 and its implications for nephrogenic diabetes insipidus and trafficking
Proc.Natl.Acad.Sci.USA, 111, 2014
3ZIG
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BU of 3zig by Molmil
SepF-like protein from Pyrococcus furiosus
分子名称: SEPF-LIKE PROTEIN
著者Duman, R, Ishikawa, S, Celik, I, Ogasawara, N, Lowe, J, Hamoen, L.W.
登録日2013-01-09
公開日2013-11-27
最終更新日2013-12-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Genetic Analyses Reveal the Protein Sepf as a New Membrane Anchor for the Z Ring.
Proc.Natl.Acad.Sci.USA, 110, 2013
6HD2
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BU of 6hd2 by Molmil
Active-site conformational dynamics of carbonic anhydrase II under native conditions: An NMR perspective
分子名称: Carbonic anhydrase 2, ZINC ION
著者Singh, H, Linser, R.
登録日2018-08-17
公開日2019-08-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Active-site conformational dynamics of carbonic anhydrase under native conditions: An NMR perspective
To Be Published
3ZIE
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BU of 3zie by Molmil
SepF-like protein from Archaeoglobus fulgidus
分子名称: SEPF-LIKE PROTEIN
著者Duman, R, Ishikawa, S, Celik, I, Ogasawara, N, Lowe, J, Hamoen, L.W.
登録日2013-01-08
公開日2013-11-20
最終更新日2013-12-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and Genetic Analyses Reveal the Protein Sepf as a New Membrane Anchor for the Z Ring
Proc.Natl.Acad.Sci.USA, 110, 2013
7F7D
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BU of 7f7d by Molmil
Crystal structure of Non-specific class-C acid phosphatase from Sphingobium sp. RSMS bound to Adenosine at pH 5.5
分子名称: ADENOSINE, Acid phosphatase, DI(HYDROXYETHYL)ETHER, ...
著者Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D.
登録日2021-06-28
公開日2022-07-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
7F7A
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BU of 7f7a by Molmil
Crystal structure of Non-specific class-C acid phosphatase from Sphingobium sp. RSMS bound to Adenine at pH 9
分子名称: ADENINE, Acid phosphatase, MAGNESIUM ION
著者Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D.
登録日2021-06-28
公開日2022-07-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
3X1M
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BU of 3x1m by Molmil
Crystal structure of Phosphopantetheine adenylyltransferase/PPAT from Pseudomonas aeruginosa with CoA
分子名称: ACETATE ION, COENZYME A, DI(HYDROXYETHYL)ETHER, ...
著者Chatterjee, R, Datta, S.
登録日2014-11-24
公開日2015-11-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Transition of phosphopantetheine adenylyltransferase from catalytic to allosteric state is characterized by ternary complex formation in Pseudomonas aeruginosa
Biochim.Biophys.Acta, 1864, 2016
6HIT
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BU of 6hit by Molmil
The crystal structure of haemoglobin from Atlantic cod
分子名称: Hemoglobin alpha 2 chain, Hemoglobin beta 4 chain, PROTOPORPHYRIN IX CONTAINING FE
著者Helland, R, Bjorkeng, E.K, Rothweiler, U, Sydnes, M.O, Pampanin, D.M.
登録日2018-08-30
公開日2019-08-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of haemoglobin from Atlantic cod.
Acta Crystallogr.,Sect.F, 75, 2019
7F9F
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BU of 7f9f by Molmil
Thrombocorticin
分子名称: MAGNESIUM ION, Thrombocorticin
著者Kageyama, H, Onodera, K, Sakai, R, Tanaka, Y, Freymann, D.M.
登録日2021-07-04
公開日2022-07-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.411 Å)
主引用文献A marine sponge-derived lectin reveals hidden pathway for thrombopoietin receptor activation.
Nat Commun, 13, 2022
6HJ4
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BU of 6hj4 by Molmil
Crystal structure of Whitewater Arroyo virus GP1 glycoprotein at pH 7.5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, Pre-glycoprotein polyprotein GP complex
著者Pryce, R, Ng, W.M, Zeltina, A, Watanabe, Y, El Omari, K, Wagner, A, Bowden, T.A.
登録日2018-08-31
公開日2018-10-10
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structure-Based Classification Defines the Discrete Conformational Classes Adopted by the Arenaviral GP1.
J. Virol., 93, 2019
3ZDW
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BU of 3zdw by Molmil
Substrate and dioxygen binding to the endospore coat laccase CotA from Bacillus subtilis
分子名称: 3-ETHYL-2-[(2Z)-2-(3-ETHYL-6-SULFO-1,3-BENZOTHIAZOL-2(3H)-YLIDENE)HYDRAZINO]-6-SULFO-3H-1,3-BENZOTHIAZOL-1-IUM, COPPER (I) ION, COTA LACCASE, ...
著者Enguita, F.J, Marcal, D, Grenha, R, Lindley, P.F, Carrondo, M.A.
登録日2012-12-01
公開日2012-12-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Substrate and Dioxygen Binding to the Endospore Coat Laccase from Bacillus Subtilis.
J.Biol.Chem., 279, 2004
7F7B
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BU of 7f7b by Molmil
Crystal structure of Non-specific class-C acid phosphatase from Sphingobium sp. RSMS bound to BIS-TRIS at pH 5.5
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acid phosphatase, MAGNESIUM ION, ...
著者Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D.
登録日2021-06-28
公開日2022-07-06
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
6HK0
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BU of 6hk0 by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) F16'S pore mutant (F247S) with alternate M4 conformation.
分子名称: Cys-loop ligand-gated ion channel, DODECYL-BETA-D-MALTOSIDE
著者Nury, H, Spurny, R, Govaerts, C, Evans, G.L, Pardon, E, Steyaert, J, Ulens, C.
登録日2018-09-04
公開日2019-10-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献A lipid site shapes the agonist response of a pentameric ligand-gated ion channel.
Nat.Chem.Biol., 15, 2019
6HD7
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BU of 6hd7 by Molmil
Cryo-EM structure of the ribosome-NatA complex
分子名称: 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, 5.8S rRNA, 5S rRNA, ...
著者Knorr, A.G, Becker, T, Beckmann, R.
登録日2018-08-17
公開日2018-12-19
最終更新日2019-01-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Ribosome-NatA architecture reveals that rRNA expansion segments coordinate N-terminal acetylation.
Nat. Struct. Mol. Biol., 26, 2019
7F9G
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BU of 7f9g by Molmil
Thrombocorticin in complex with Ca2+ and fucose
分子名称: CALCIUM ION, Thrombocorticin, alpha-L-fucopyranose
著者Kageyama, H, Onodera, K, Sakai, R, Tanaka, Y.
登録日2021-07-04
公開日2022-07-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.331 Å)
主引用文献A marine sponge-derived lectin reveals hidden pathway for thrombopoietin receptor activation.
Nat Commun, 13, 2022
7F9J
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BU of 7f9j by Molmil
Thrombocorticin Q25K in complex with Ca2+
分子名称: CALCIUM ION, Thrombocorticin Q25K mutant
著者Kageyama, H, Onodera, K, Sakai, R, Tanaka, Y.
登録日2021-07-04
公開日2022-07-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献A marine sponge-derived lectin reveals hidden pathway for thrombopoietin receptor activation.
Nat Commun, 13, 2022
6HOE
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BU of 6hoe by Molmil
TRANSCRIPTIONAL REPRESSOR ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH BDM44850
分子名称: HTH-type transcriptional regulator EthR, ethyl 2-[4-[4-[3,3,3-tris(fluoranyl)propylcarbamoyl]phenyl]-1,3-thiazol-2-yl]ethanoate
著者Wintjens, R, Wohlkonig, A.
登録日2018-09-17
公開日2018-12-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A comprehensive analysis of the protein-ligand interactions in crystal structures of Mycobacterium tuberculosis EthR.
Biochim Biophys Acta Proteins Proteom, 1867, 2018
7F91
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SeMet derivative of Thrombocorticin
分子名称: Thrombocorticin
著者Kageyama, H, Onodera, K, Sakai, R, Tanaka, Y.
登録日2021-07-03
公開日2022-07-06
最終更新日2023-07-19
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献A marine sponge-derived lectin reveals hidden pathway for thrombopoietin receptor activation.
Nat Commun, 13, 2022

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