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PDB: 27201 件

1QTV
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T26E APO STRUCTURE OF T4 LYSOZYME
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, PROTEIN (T4 LYSOZYME)
著者Kuroki, R, Weaver, L.H, Matthews, B.W.
登録日1999-06-29
公開日1999-07-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of the conversion of T4 lysozyme into a transglycosidase by reengineering the active site.
Proc.Natl.Acad.Sci.USA, 96, 1999
1K0B
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Ure2p in Complex with Glutathione
分子名称: GLUTATHIONE, URE2 PROTEIN
著者Bousset, L, Belrhali, H, Melki, R, Morera, S.
登録日2001-09-19
公開日2001-12-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of the yeast prion Ure2p functional region in complex with glutathione and related compounds.
Biochemistry, 40, 2001
6A0A
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Structure of a triple-helix region of human collagen type III
分子名称: collagen type III peptide
著者Yang, X, Zhu, Y, Ye, S, Zhang, R.
登録日2018-06-05
公開日2018-12-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.502 Å)
主引用文献Characterization by high-resolution crystal structure analysis of a triple-helix region of human collagen type III with potent cell adhesion activity.
Biochem. Biophys. Res. Commun., 508, 2019
5VCR
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Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase with bound uranium dioxide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, CHLORIDE ION, ...
著者Sanders, J.H, Kadirvelraj, R, Wood, Z.A.
登録日2017-03-31
公開日2018-04-11
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.992 Å)
主引用文献HumanN-acetylglucosaminyltransferase II substrate recognition uses a modular architecture that includes a convergent exosite.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5VEH
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Re-refinement OF THE PDB STRUCTURE 1yiz of Aedes aegypti kynurenine aminotransferase
分子名称: BROMIDE ION, GLYCEROL, Kynurenine aminotransferase
著者Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
登録日2017-04-04
公開日2017-11-29
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
254L
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LYSOZYME
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, LYSOZYME
著者Kuroki, R, Shoichet, B, Weaver, L.H, Matthews, B.W.
登録日1997-11-10
公開日1998-01-28
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A relationship between protein stability and protein function.
Proc.Natl.Acad.Sci.USA, 92, 1995
5VI0
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Pseudomonas fluorescens alkylpurine DNA glycosylase AlkC bound to DNA containing an abasic site analog
分子名称: DNA (5'-D(*AP*AP*GP*AP*CP*TP*TP*GP*GP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*T)-3'), SODIUM ION, ...
著者Shi, R, Eichman, B.F.
登録日2017-04-13
公開日2017-10-25
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献Selective base excision repair of DNA damage by the non-base-flipping DNA glycosylase AlkC.
EMBO J., 37, 2018
3E53
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Crystal structure of N-terminal domain of a Fatty Acyl AMP Ligase FAAL28 from Mycobacterium tuberculosis
分子名称: FATTY-ACID-CoA LIGASE FADD28
著者Goyal, A, Rajakumara, E, Yousuf, M, Sankaranarayanan, R.
登録日2008-08-13
公開日2009-01-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Mechanistic and functional insights into fatty acid activation in Mycobacterium tuberculosis.
Nat.Chem.Biol., 5, 2009
6AA4
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Crystal structure of MTH1 in complex with alpha-mangostin (cocktail No. 9)
分子名称: 1,3,6-trihydroxy-7-methoxy-2,8-bis(3-methylbut-2-en-1-yl)-9H-xanthen-9-one, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION, ...
著者Yokoyama, T, Kitakami, R, Mizuguchi, M.
登録日2018-07-17
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery of a new class of MTH1 inhibitor by X-ray crystallographic screening.
Eur J Med Chem, 167, 2019
5VE4
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Crystal structure of persulfide dioxygenase-rhodanese fusion protein with rhodanese domain inactivating mutation (C314S) from Burkholderia phytofirmans
分子名称: BpPRF, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Motl, N, Skiba, M.A, Smith, J.L, Banerjee, R.
登録日2017-04-03
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural and biochemical analyses indicate that a bacterial persulfide dioxygenase-rhodanese fusion protein functions in sulfur assimilation.
J. Biol. Chem., 292, 2017
5VET
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PHOSPHOLIPASE A2, RE-REFINEMENT OF THE PDB STRUCTURE 1JQ8 WITHOUT THE PUTATIVE COMPLEXED OLIGOPEPTIDE
分子名称: Phospholipase A2 VRV-PL-VIIIa
著者Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
登録日2017-04-05
公開日2018-06-20
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
6AC6
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Ab initio crystal structure of Selenomethionine labelled Mycobacterium smegmatis Mfd
分子名称: Mycobacterium smegmatis Mfd, SULFATE ION
著者Putta, S, Fox, G.C, Walsh, M.A, Rao, D.N, Nagaraja, V, Natesh, R.
登録日2018-07-25
公開日2019-08-28
実験手法X-RAY DIFFRACTION (2.989 Å)
主引用文献Structural basis for nucleotide-mediated remodelling mechanism of Mycobacterium Mfd
To Be Published
6A2S
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Mycobacterium tuberculosis LexA C-domain S160A
分子名称: DI(HYDROXYETHYL)ETHER, HEXAETHYLENE GLYCOL, LexA repressor
著者Chandran, A.V, Srikalaivani, R, Paul, A, Vijayan, M.
登録日2018-06-12
公開日2019-01-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Biochemical characterization of Mycobacterium tuberculosis LexA and structural studies of its C-terminal segment.
Acta Crystallogr D Struct Biol, 75, 2019
2A70
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Crystal structure of Emp47p carbohydrate recognition domain (CRD), monoclinic crystal form 2
分子名称: 1,2-ETHANEDIOL, Emp47p
著者Satoh, T, Sato, K, Kanoh, A, Yamashita, K, Katoh, R, Nakano, A, Wakatsuki, S.
登録日2005-07-04
公開日2006-01-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
2A79
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Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION, Potassium voltage-gated channel subfamily A member 2, ...
著者Long, S.B, Campbell, E.B, MacKinnon, R.
登録日2005-07-05
公開日2005-07-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of a mammalian voltage-dependent Shaker family K+ channel.
Science, 309, 2005
5ZSR
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NifS from Hydrogenimonas thermophila, soaked with L-cysteine for 8 min
分子名称: Cysteine desulfurase
著者Nakamura, R, Fujishiro, T, Takahashi, Y.
登録日2018-04-29
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献X-ray snapshots of two classes of cysteine desulfurase enzymes NifS and SufS
to be published
5ZWT
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Crystal structure of the S37A mutant of apo-acyl carrier protein from Leishmania major
分子名称: Acyl carrier protein
著者Sharma, B, Arya, R, Kundu, S, Makde, R.D.
登録日2018-05-16
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A conformational switch from a closed apo- to an open holo-form equips the acyl carrier protein for acyl chain accommodation.
Biochim Biophys Acta Proteins Proteom, 1867, 2018
6AA3
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Crystal structure of MTH1 in apo form (cocktail No. 1)
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION, ZINC ION
著者Yokoyama, T, Kitakami, R, Mizuguchi, M.
登録日2018-07-17
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Discovery of a new class of MTH1 inhibitor by X-ray crystallographic screening.
Eur J Med Chem, 167, 2019
1UMA
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ALPHA-THROMBIN (HIRUGEN) COMPLEXED WITH NA-(N,N-DIMETHYLCARBAMOYL)-ALPHA-AZALYSINE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-THROMBIN, HIRUDIN I, ...
著者Nardini, M, Pesce, A, Rizzi, M, Casale, E, Ferraccioli, R, Balliano, G, Milla, P, Ascenzi, P, Bolognesi, M.
登録日1996-03-26
公開日1996-11-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Human alpha-thrombin inhibition by the active site titrant N alpha-(N,N-dimethylcarbamoyl)-alpha-azalysine p-nitrophenyl ester: a comparative kinetic and X-ray crystallographic study.
J.Mol.Biol., 258, 1996
1LQG
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ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE COMPLEX WITH URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
分子名称: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR
著者Saikrishnan, K, Sagar, M.B, Ravishankar, R, Roy, S, Purnapatre, K, Handa, P, Varshney, U, Vijayan, M.
登録日2002-05-10
公開日2002-11-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG.
Acta Crystallogr.,Sect.D, 58, 2002
5ZST
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NifS from Hydrogenimonas thermopile in a persulfurated form
分子名称: Cysteine desulfurase
著者Nakamura, R, Fujishiro, T, Takahashi, Y.
登録日2018-04-29
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
1LTX
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Structure of Rab Escort Protein-1 in complex with Rab geranylgeranyl transferase and isoprenoid
分子名称: AAAA, CHLORIDE ION, FARNESYL, ...
著者Pylypenko, O, Rak, A, Reents, R, Niculae, A, Thoma, N.H, Waldmann, H, Schlichting, I, Goody, R.S, Alexandrov, K.
登録日2002-05-21
公開日2003-05-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of Rab Escort Protein-1 in Complex with Rab Geranylgeranyltransferase
Mol.Cell, 11, 2003
5ZWS
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Crystal structure of apo-acyl carrier protein from Leishmania major
分子名称: Acyl carrier protein
著者Arya, R, Sharma, B, Makde, R.D, Kundu, S.
登録日2018-05-16
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A conformational switch from a closed apo- to an open holo-form equips the acyl carrier protein for acyl chain accommodation.
Biochim Biophys Acta Proteins Proteom, 1867, 2018
5WT6
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Cysteine persulfide intermediate of NifS from Helicobacter pylori
分子名称: 2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID, CHLORIDE ION, Cysteine desulfurase IscS, ...
著者Fujishiro, T, Nakamura, R, Takahashi, Y.
登録日2016-12-09
公開日2017-12-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural snapshot of cysteine desulfurase NifS with L-cysteine in initiation of catalysis
To be published
5WPB
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Crystal structure of fragment 3-(3-(pyridin-2-ylmethoxy)quinoxalin-2-yl)propanoic acid bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
分子名称: 3-{3-[(pyridin-2-yl)methoxy]quinoxalin-2-yl}propanoic acid, Histone deacetylase 6, UNKNOWN ATOM OR ION, ...
著者Harding, R.J, Tempel, W, Ferreira de Freitas, R, Franzoni, I, Ravichandran, M, Lautens, M, Santhakumar, V, Schapira, M, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
登録日2017-08-04
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Small Molecule Antagonists of the Interaction between the Histone Deacetylase 6 Zinc-Finger Domain and Ubiquitin.
J. Med. Chem., 60, 2017

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