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PDB: 27201 件

8ADF
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X-ray crystal structure of PPAR gamma ligand binding domain in complex with CZ39
分子名称: (2R)-3-(4-bromophenyl)-2-(3-hydroxyphenyl)-4-oxidanyl-2H-furan-5-one, Peroxisome proliferator-activated receptor gamma
著者Capelli, D, Montanari, R, Pochetti, G, Meneghetti, F, Villa, S.
登録日2022-07-08
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Biological Screening and Crystallographic Studies of Hydroxy gamma-Lactone Derivatives to Investigate PPAR gamma Phosphorylation Inhibition.
Biomolecules, 13, 2023
5UCU
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STRUCTURAL AND MECHANISTIC INSIGHTS INTO HEMOGLOBIN-CATALYZED HYDROGEN SULFIDE OXIDATION AND THE FATE OF POLYSULFIDE PRODUCTS
分子名称: HYDROSULFURIC ACID, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Vitvitsky, V, Yadav, P.K, An, S, Seravalli, J, Cho, U.-S, Banerjee, R.
登録日2016-12-22
公開日2017-03-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献Structural and Mechanistic Insights into Hemoglobin-catalyzed Hydrogen Sulfide Oxidation and the Fate of Polysulfide Products.
J. Biol. Chem., 292, 2017
5YCT
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Engineered hairpin loop3 mutant monomer in Single-chain Monellin
分子名称: Single chain Monellin
著者Surana, P, Nandwani, N, Udgaonkar, J.B, Gosavi, S, Das, R.
登録日2017-09-08
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
5UCH
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Hsp90b N-terminal domain with inhibitors
分子名称: 2-(5-Hydroxy-4-(isoindoline-2-carbonyl)-2-isopropylphenyl)acetonitrile, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Peng, S, Balch, M, Matts, R, Deng, J.
登録日2016-12-22
公開日2018-01-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.654 Å)
主引用文献Structure-guided design of an Hsp90 beta N-terminal isoform-selective inhibitor.
Nat Commun, 9, 2018
5U9N
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Second Bromodomain of cdg4_1340 from Cryptosporidium parvum, complexed with bromosporine
分子名称: Bromo domain containing protein, Bromosporine, SULFATE ION
著者Hou, C.F.D, Lin, Y.H, Loppnau, P, Hutchinson, A, Dong, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Hui, R, Walker, J.R, Structural Genomics Consortium (SGC)
登録日2016-12-16
公開日2017-01-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Second Bromodomain of cdg4_1340 from Cryptosporidium parvum, complexed with bromosporine
To be published
5YF2
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Crystal structure of CARNMT1 bound to anserine and SAH
分子名称: (2~{S})-2-(3-azanylpropanoylamino)-3-(3-methylimidazol-4-yl)propanoic acid, CALCIUM ION, Carnosine N-methyltransferase, ...
著者Cao, R, Li, H.
登録日2017-09-20
公開日2018-08-01
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Molecular basis for histidine N1 position-specific methylation by CARNMT1.
Cell Res., 28, 2018
1KG6
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BU of 1kg6 by Molmil
Crystal structure of the K142R mutant of E.coli MutY (core fragment)
分子名称: A/G-specific adenine glycosylase, GLYCEROL, IRON/SULFUR CLUSTER, ...
著者Gilboa, R, Kilshtein, A, Zharkov, D.O, Kycia, J.H, Gerchman, S.E, Grollman, A.P, Shoham, G.
登録日2001-11-26
公開日2002-11-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Analysis of the E.coli MutY DNA glycosylase structure and function by site-directed mutagenesis
To be Published
1Q61
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PKA triple mutant model of PKB
分子名称: N-OCTANOYL-N-METHYLGLUCAMINE, cAMP-dependent protein kinase inhibitor, alpha form, ...
著者Gassel, M, Breitenlechner, C.B, Rueger, P, Jucknischke, U, Schneider, T, Huber, R, Bossemeyer, D, Engh, R.A.
登録日2003-08-12
公開日2003-09-30
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mutants of protein kinase A that mimic the ATP-binding site of protein kinase B (AKT)
J.Mol.Biol., 329, 2003
1PXV
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The staphostatin-staphopain complex: a forward binding inhibitor in complex with its target cysteine protease
分子名称: GUANIDINE, SULFATE ION, cysteine protease, ...
著者Filipek, R, Rzychon, M, Oleksy, A, Gruca, M, Dubin, A, Potempa, J, Bochtler, M.
登録日2003-07-07
公開日2003-10-21
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Staphostatin-Staphopain Complex: A FORWARD BINDING INHIBITOR IN COMPLEX WITH ITS TARGET CYSTEINE PROTEASE.
J.Biol.Chem., 278, 2003
8B3K
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Crystal structure of human Plexin-B1 (20-535) in the unbound state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, Plexin-B1
著者Cowan, R, Hall, G, Carr, M.
登録日2022-09-16
公開日2023-05-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.685 Å)
主引用文献Nanobody inhibitors of Plexin-B1 identify allostery in plexin-semaphorin interactions and signaling.
J.Biol.Chem., 299, 2023
8AHN
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Sin Nombre virus Gn in complex with Fab SNV-42
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope polyprotein, ...
著者Stass, R, Bowden, T.A.
登録日2022-07-22
公開日2023-05-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanistic basis for potent neutralization of Sin Nombre hantavirus by a human monoclonal antibody.
Nat Microbiol, 8, 2023
8B3Q
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CryoEM structure of the central filamentous region of the f1 filamentous bacteriophage, consisting of the major capsid protein pVIII
分子名称: Capsid protein G8P
著者Conners, R, McLaren, M, Gold, V.A.M.
登録日2022-09-16
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Cryo-electron microscopy of the f1 filamentous phage reveals insights into viral infection and assembly.
Nat Commun, 14, 2023
5YEI
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Mechanistic insight into the regulation of Pseudomonas aeruginosa aspartate kinase
分子名称: Aspartokinase, GLYCEROL, LYSINE, ...
著者Li, C, Yang, M, Liu, L, Peng, C, Li, T, He, L, Song, Y, Zhu, Y, Bao, R.
登録日2017-09-17
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Mechanistic insights into the allosteric regulation of Pseudomonas aeruginosa aspartate kinase.
Biochem.J., 475, 2018
8B3P
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CryoEM structure of the round tip (proteins pVII/pVIII/pIX) from the f1 filamentous bacteriophage
分子名称: Capsid protein G8P, Tail virion protein G7P, Tail virion protein G9P
著者Conners, R, McLaren, M, Gold, V.A.M.
登録日2022-09-16
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Cryo-electron microscopy of the f1 filamentous phage reveals insights into viral infection and assembly.
Nat Commun, 14, 2023
8B3O
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CryoEM structure of the pointy tip (proteins pIII/pVI/pVIII) from the f1 filamentous bacteriophage
分子名称: Attachment protein G3P, Capsid protein G8P, Head virion protein G6P
著者Conners, R, McLaren, M, Gold, V.A.M.
登録日2022-09-16
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Cryo-electron microscopy of the f1 filamentous phage reveals insights into viral infection and assembly.
Nat Commun, 14, 2023
5YHL
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BU of 5yhl by Molmil
Crystal structure of the human prostaglandin E receptor EP4 in complex with Fab and an antagonist Br-derivative
分子名称: 4-[2-[[(2R)-2-(4-bromanylnaphthalen-1-yl)propanoyl]amino]-4-cyano-phenyl]butanoic acid, Heavy chain of Fab fragment, Light chain of Fab fragment, ...
著者Toyoda, Y, Morimoto, K, Suno, R, Horita, S, Iwata, S, Kobayashi, T.
登録日2017-09-28
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Ligand binding to human prostaglandin E receptor EP4at the lipid-bilayer interface.
Nat. Chem. Biol., 15, 2019
4NWD
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BU of 4nwd by Molmil
Crystal structure of the kainate receptor GluK3 ligand-binding domain in complex with the agonist (2S,4R)-4-(3-Methylamino-3-oxopropyl)glutamic acid at 2.6 A resolution
分子名称: (4R)-4-[3-(methylamino)-3-oxopropyl]-L-glutamic acid, CHLORIDE ION, Glutamate receptor ionotropic, ...
著者Venskutonyte, R, Larsen, A.P, Frydenvang, K, Gajhede, M, Kastrup, J.S.
登録日2013-12-06
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular Recognition of Two 2,4-syn-Functionalized (S)-Glutamate Analogues by the Kainate Receptor GluK3 Ligand Binding Domain.
Chemmedchem, 9, 2014
5UFW
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Estrogen Receptor Alpha Ligand Binding Domain in Complex with OP1154
分子名称: (2S)-3-(4-hydroxyphenyl)-4-methyl-2-(4-{2-[(3S)-3-methylpyrrolidin-1-yl]ethoxy}phenyl)-2H-1-benzopyran-7-ol, Estrogen receptor
著者Fanning, S.W, Hodges-Gallagher, L, Myles, D.C, Sun, R, Fowler, C.E, Green, B.D, Harmon, C.L, Greene, G.L, Kushner, P.J.
登録日2017-01-06
公開日2018-01-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.583 Å)
主引用文献Specific stereochemistry of OP-1074 disrupts estrogen receptor alpha helix 12 and confers pure antiestrogenic activity.
Nat Commun, 9, 2018
1Q17
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Structure of the yeast Hst2 protein deacetylase in ternary complex with 2'-O-acetyl ADP ribose and histone peptide
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, CHLORIDE ION, HST2 protein, ...
著者Zhao, K, Chai, X, Marmorstein, R.
登録日2003-07-18
公開日2003-11-18
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the Yeast Hst2 Protein Deacetylase in Ternary Complex with 2'-O-Acetyl ADP Ribose and Histone Peptide.
Structure, 11, 2003
1KF4
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Atomic Resolution Structure of RNase A at pH 6.3
分子名称: SULFATE ION, pancreatic ribonuclease
著者Berisio, R, Sica, F, Lamzin, V.S, Wilson, K.S, Zagari, A, Mazzarella, L.
登録日2001-11-19
公開日2001-12-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Atomic resolution structures of ribonuclease A at six pH values.
Acta Crystallogr.,Sect.D, 58, 2002
1KG4
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Crystal structure of the K142A mutant of E. coli MutY (core fragment)
分子名称: A/G-specific adenine glycosylase, GLYCEROL, IRON/SULFUR CLUSTER, ...
著者Gilboa, R, Kilshtein, A, Zharkov, D.O, Kycia, J.H, Gerchman, S.E, Grollman, A.P, Shoham, G.
登録日2001-11-26
公開日2002-11-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Analysis of the E.coli MutY DNA glycosylase structure and function by site-directed mutagenesis
To be Published
1KHQ
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ORTHORHOMBIC FORM OF PAPAIN/ZLFG-DAM COVALENT COMPLEX
分子名称: Papain, peptidic inhibitor
著者Janowski, R, Kozak, M, Jankowska, E, Grzonka, Z, Jaskolski, M.
登録日2001-11-30
公開日2003-09-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Two polymorphs of a covalent complex between papain and a diazomethylketone inhibitor
J.Pept.Res., 64, 2004
1KI7
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CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE I COMPLEXED WITH 5-IODODEOXYURIDINE
分子名称: 5-IODODEOXYURIDINE, SULFATE ION, THYMIDINE KINASE
著者Champness, J.N, Bennett, M.S, Wien, F, Visse, R, Summers, W.C, Sanderson, M.R.
登録日1998-05-15
公開日1998-12-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Exploring the active site of herpes simplex virus type-1 thymidine kinase by X-ray crystallography of complexes with aciclovir and other ligands.
Proteins, 32, 1998
5UG3
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NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN GID MUTANT A10V
分子名称: Alpha-conotoxin GID
著者Hussein, A.K, Leffler, A.E, Zebroski, H.A, Powell, S.R, Kuryatov, A, Filipenko, P, Gorson, J, Heizmann, A, Lyskov, S, Nicke, A, Lindstrom, J, Rudy, B, Bonneau, R, Holford, M, Poget, S.F.
登録日2017-01-06
公開日2017-09-06
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Discovery of peptide ligands through docking and virtual screening at nicotinic acetylcholine receptor homology models.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1KIM
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CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE I COMPLEXED WITH DEOXYTHYMIDINE
分子名称: SULFATE ION, THYMIDINE, THYMIDINE KINASE
著者Champness, J.N, Bennett, M.S, Wien, F, Brown, D.G, Visse, R, Sandhu, G, Davies, A, Rizkallah, P.J, Melitz, C, Summers, W.C, Sanderson, M.R.
登録日1997-11-12
公開日1998-05-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Exploring the active site of herpes simplex virus type-1 thymidine kinase by X-ray crystallography of complexes with aciclovir and other ligands.
Proteins, 32, 1998

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件を2024-07-17に公開中

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