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PDB: 27201 results

8RMK
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BU of 8rmk by Molmil
Cryo-EM structure of human CALHM2 in complex with synthetic nanobody SbC2
Descriptor: Calcium homeostasis modulator protein 2, DIUNDECYL PHOSPHATIDYL CHOLINE, Synthetic nanobody SbC2
Authors:Drozdzyk, K, Dutzler, R.
Deposit date:2024-01-08
Release date:2024-06-19
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structural features of heteromeric channels composed of CALHM2 and CALHM4 paralogs.
Elife, 13, 2024
7TG4
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BU of 7tg4 by Molmil
[T:Ag+/Hg2+:T--(pH11-pH7; 5s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 with Ag+ and Hg2+ for 5s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-01-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (5.21 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
8S4B
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BU of 8s4b by Molmil
CdaA-C08 complex
Descriptor: (4-methoxycarbonylphenyl)methylazanium, Diadenylate cyclase
Authors:Neumann, P, Ficner, R.
Deposit date:2024-02-21
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:CdaA-C08 complex
To Be Published
7TFX
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BU of 7tfx by Molmil
[T:Ag+/Hg2+:T--(pH11-pH7; 120s)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 for 120s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-01-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (4.99 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
7TFT
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BU of 7tft by Molmil
[T:Ag+/Hg2+:T--(pH11-pH7; 5s)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 for 5s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-01-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (4.42 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
8RGZ
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BU of 8rgz by Molmil
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Descriptor: Envelope glycoprotein B, HDIT101 Fab heavy chain, HDIT101 Fab light chain
Authors:Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
Deposit date:2023-12-14
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
7QUW
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BU of 7quw by Molmil
CVB3-3Cpro in complex with inhibitor MG-78
Descriptor: (1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, Protease 3C
Authors:Zhang, L, Hilgenfeld, R.
Deposit date:2022-01-19
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:From Repurposing to Redesign: Optimization of Boceprevir to Highly Potent Inhibitors of the SARS-CoV-2 Main Protease.
Molecules, 27, 2022
7TG6
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BU of 7tg6 by Molmil
[T:Ag+/Hg2+:T--(pH11-pH7; 30s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 with Ag+ and Hg2+ for 30s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-01-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (4.82 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
3WNP
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BU of 3wnp by Molmil
D308A, F268V, D469Y, A513V, and Y515S quintuple mutant of Bacillus circulans T-3040 cycloisomaltooligosaccharide glucanotransferase complexed with isomaltoundecaose
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Cycloisomaltooligosaccharide glucanotransferase, ...
Authors:Suzuki, R, Suzuki, N, Fujimoto, Z, Momma, M, Kimura, K, Kitamura, S, Kimura, A, Funane, K.
Deposit date:2013-12-10
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular engineering of cycloisomaltooligosaccharide glucanotransferase from Bacillus circulans T-3040: structural determinants for the reaction product size and reactivity.
Biochem.J., 467, 2015
7TFW
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BU of 7tfw by Molmil
[T:Ag+/Hg2+:T--(pH11-pH7; 60s)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 for 60s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-01-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.92 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
7TFY
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BU of 7tfy by Molmil
[T:Ag+/Hg2+:T--(pH11-pH7; 300s)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 for 300s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-01-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (4.71 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
7TG9
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BU of 7tg9 by Molmil
[T:Ag+/Hg2+:T--(pH11-pH7; 300s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 with Ag+ and Hg2+ for 300s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-01-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (4.69 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
8RMN
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BU of 8rmn by Molmil
Cryo-EM structure of a dimer of decameric human CALHM4 in complex with synthetic nanobody SbC4
Descriptor: Calcium homeostasis modulator protein 4, Synthetic nanobody SbC4
Authors:Peter, M, Drozdzyk, K, Dutzler, R.
Deposit date:2024-01-08
Release date:2024-06-19
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural features of heteromeric channels composed of CALHM2 and CALHM4 paralogs.
Elife, 13, 2024
7TGB
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BU of 7tgb by Molmil
[T:Ag+/Hg2+:T--(pH8.5-pH11; 60s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8.5 and soaked in pH 11 with Ag+ and Hg2+ for 60s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (5.36 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
7TG3
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BU of 7tg3 by Molmil
[T:Ag+/Hg2+:T--(pH8.5-pH11; 300s)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8.5 and soaked in pH 11 for 300s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (4.59 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
1FPM
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BU of 1fpm by Molmil
MONOVALENT CATION BINDING SITES IN N10-FORMYLTETRAHYDROFOLATE SYNTHETASE FROM MOORELLA THERMOACETICA
Descriptor: CESIUM ION, FORMATE--TETRAHYDROFOLATE LIGASE, SULFATE ION
Authors:Radfar, R, Leaphart, A, Brewer, J.M, Minor, W, Odom, J.D.
Deposit date:2000-08-31
Release date:2001-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Cation binding and thermostability of FTHFS monovalent cation binding sites and thermostability of N10-formyltetrahydrofolate synthetase from Moorella thermoacetica.
Biochemistry, 39, 2000
7TGA
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BU of 7tga by Molmil
[T:Ag+/Hg2+:T--(pH8.5-pH11; 30s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8.5 and soaked in pH 11 with Ag+ and Hg2+ for 30s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (6.61 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
7TGD
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BU of 7tgd by Molmil
[T:Ag+/Hg2+:T--(pH8.5-pH11; 300s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8.5 and soaked in pH 11 with Ag+ and Hg2+ for 300s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (5.25 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
7TGC
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BU of 7tgc by Molmil
[T:Ag+/Hg2+:T--(pH8.5-pH11; 90s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8.5 and soaked in pH 11 with Ag+ and Hg2+ for 90s
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P.
Deposit date:2022-01-07
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (5.19 Å)
Cite:Crystallographic pH Titration of Silver and Mercury Mediated DNA Base Pairs
To Be Published
8S4C
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BU of 8s4c by Molmil
CdaA-H04 complex
Descriptor: DAMINOZIDE, Diadenylate cyclase
Authors:Neumann, P, Ficner, R.
Deposit date:2024-02-21
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:CdaA-H04 complex
To Be Published
6P9E
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BU of 6p9e by Molmil
Crystal structure of IL-36gamma complexed to A-552
Descriptor: (2S)-2-{[4-(3-amino-4-methylphenyl)-6-methylpyrimidin-2-yl]oxy}-3-methoxy-3,3-diphenylpropanoic acid, Interleukin-36 gamma
Authors:Argiriadi, M.A, Todorovic, T, Su, Z, Putman, B, Kakavas, S.J, Salte, K.M, McDonald, H.A, Wetter, J.B, Paulsboe, S.E, Sun, Q, Gerstein, C.E, Medina, L, Sielaff, B, Sadhukhan, R, Stockmann, H, Richardson, P.L, Qiu, W, Henry, R.F, Herold, J.M, Shotwell, J.B, McGaraughty, S.P, Honore, P, Gopalakrishnan, S.M, Sun, C.C, Scott, V.E.
Deposit date:2019-06-10
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Small Molecule IL-36 gamma Antagonist as a Novel Therapeutic Approach for Plaque Psoriasis.
Sci Rep, 9, 2019
1FMV
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BU of 1fmv by Molmil
CRYSTAL STRUCTURE OF THE APO MOTOR DOMAIN OF DICTYOSTELLIUM MYOSIN II
Descriptor: CHLORIDE ION, MYOSIN II HEAVY CHAIN
Authors:Bauer, C.B, Holden, H.M, Thoden, J.B, Smith, R, Rayment, I.
Deposit date:2000-08-18
Release date:2000-11-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structures of the apo and MgATP-bound states of Dictyostelium discoideum myosin motor domain.
J.Biol.Chem., 275, 2000
4Y2L
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BU of 4y2l by Molmil
Structure of CFA/I pili major subunit CfaB trimer
Descriptor: CALCIUM ION, CFA/I fimbrial subunit B, ISOPROPYL ALCOHOL
Authors:Bao, R, Xia, D.
Deposit date:2015-02-10
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.746 Å)
Cite:Off-pathway assembly of fimbria subunits is prevented by chaperone CfaA of CFA/I fimbriae from enterotoxigenic E. coli.
Mol. Microbiol., 102, 2016
3RMT
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BU of 3rmt by Molmil
Crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate synthase from Bacillus halodurans C-125
Descriptor: 3-phosphoshikimate 1-carboxyvinyltransferase 1, SULFATE ION
Authors:Malashkevich, V.N, Toro, R, Seidel, R, Ramagopal, U, Zencheck, W, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-04-21
Release date:2011-05-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate synthase from Bacillus halodurans C-125
To be Published
4Y3K
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BU of 4y3k by Molmil
Structure of Vaspin mutant E379S
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Serpin A12
Authors:Pippel, J, Strater, N, Ulbricht, D, Schultz, S, Meier, R, Heiker, J.T.
Deposit date:2015-02-10
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A unique serpin P1' glutamate and a conserved beta-sheet C arginine are key residues for activity, protease recognition and stability of serpinA12 (vaspin).
Biochem.J., 470, 2015

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PDB entries from 2024-07-17

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