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PDB: 106 件
3PJ5
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BU of 3pj5 by Molmil
Crystal structure of far-red fluorescent protein Katushka crystallized at pH 5.0
分子名称: Red fluorescent protein eqFP578, SULFATE ION
著者Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
登録日2010-11-08
公開日2011-05-25
最終更新日2012-02-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
8DWO
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BU of 8dwo by Molmil
Cryo-EM Structure of Eastern Equine Encephalitis Virus in complex with SKE26 Fab
分子名称: Envelope glycoprotein E1, Envelope glycoprotein E2, SKE26 Fab Heavy Chain, ...
著者Pletnev, S, Verardi, R, Roedeger, M, Kwong, P.
登録日2022-08-01
公開日2023-07-19
最終更新日2023-09-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
3PJB
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BU of 3pjb by Molmil
Crystal structure of red fluorescent protein eqFP578 crystallized at pH 4.0
分子名称: GLYCEROL, Red fluorescent protein eqFP578
著者Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
登録日2010-11-09
公開日2011-05-25
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
8EUV
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BU of 8euv by Molmil
Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-COMBO1 FAB
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
著者Pletnev, S, Kwong, P.
登録日2022-10-19
公開日2023-09-27
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site.
Nat Commun, 14, 2023
8EUW
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BU of 8euw by Molmil
Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-MM28 FAB
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
著者Pletnev, S, Kwong, P.
登録日2022-10-19
公開日2023-09-27
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site.
Nat Commun, 14, 2023
8EUU
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BU of 8euu by Molmil
Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01 FAB
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
著者Pletnev, S, Kwong, P.
登録日2022-10-19
公開日2023-09-27
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site.
Nat Commun, 14, 2023
3PIB
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BU of 3pib by Molmil
Crystal structure of red fluorescent protein eqFP578 crystallized at pH 5.5
分子名称: GLYCEROL, eqFP578 fluorescent protein
著者Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
登録日2010-11-05
公開日2011-05-25
最終更新日2012-02-22
実験手法X-RAY DIFFRACTION (1.154 Å)
主引用文献Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3PJ7
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BU of 3pj7 by Molmil
Crystal structure of far-red fluorescent protein Katushka crystallized at pH 8.5
分子名称: Red fluorescent protein eqFP578
著者Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
登録日2010-11-08
公開日2011-05-25
最終更新日2012-02-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3H1R
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BU of 3h1r by Molmil
Order-disorder structure of fluorescent protein FP480
分子名称: Fluorescent protein FP480
著者Pletnev, S, Morozova, K.S, Verkhusha, V.V, Dauter, Z.
登録日2009-04-13
公開日2009-09-08
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Rotational order-disorder structure of fluorescent protein FP480
Acta Crystallogr.,Sect.D, 65, 2009
3H1O
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BU of 3h1o by Molmil
The Structure of Fluorescent Protein FP480
分子名称: Fluorescent protein FP480, GLYCEROL
著者Pletnev, S, Morozova, K.S, Verkhusha, V.V, Dauter, Z.
登録日2009-04-13
公開日2009-09-08
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rotational order-disorder structure of fluorescent protein FP480
Acta Crystallogr.,Sect.D, 65, 2009
2ICR
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BU of 2icr by Molmil
Red fluorescent protein zRFP574 from Zoanthus sp.
分子名称: Red fluorescent protein zoanRFP, SULFATE ION
著者Pletnev, S, Pletneva, N, Tikhonova, T, Pletnev, V.
登録日2006-09-13
公開日2007-10-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
7LSC
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BU of 7lsc by Molmil
Crystal structure of near-infrared fluorescent protein miRFP670nano3
分子名称: 3-[2-[(~{Z})-[5-[(~{Z})-[(3~{S},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(~{Z})-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, miRFP670nano3
著者Pletnev, S.
登録日2021-02-18
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Near-infrared fluorescent protein with enhanced brightness.
To Be Published
7LSD
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BU of 7lsd by Molmil
Crystal structure of near-infrared fluorescent protein miRFP718nano
分子名称: BILIVERDINE IX ALPHA, miRFP718nano
著者Pletnev, S.
登録日2021-02-18
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Rational design of a small near-infrared fluorescent protein from CBCR suitable for deep-tissue SWIR imaging.
To Be Published
3U8C
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BU of 3u8c by Molmil
Crystal structure of monomeric reversibly photoswitchable red fluorescent protein rsTagRFP in the ON state
分子名称: Fluorescent protein rsTagRFP, GLYCEROL
著者Pletnev, S.
登録日2011-10-16
公開日2012-02-22
最終更新日2012-05-09
実験手法X-RAY DIFFRACTION (2.188 Å)
主引用文献A structural basis for reversible photoswitching of absorbance spectra in red fluorescent protein rsTagRFP.
J.Mol.Biol., 417, 2012
5VIV
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BU of 5viv by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP670
分子名称: 3-[2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl] methyl]-5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]pro panoic acid, 3-[5-[[(3~{R},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, CHLORIDE ION, ...
著者Pletnev, S.
登録日2017-04-17
公開日2017-06-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
5VIK
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BU of 5vik by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP703
分子名称: BILIVERDINE IX ALPHA, near-infrared fluorescent protein miRFP703
著者Pletnev, S.
登録日2017-04-17
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
5VIQ
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BU of 5viq by Molmil
Crystal structure of monomeric near-infrared fluorescent protein miRFP709
分子名称: BILIVERDINE IX ALPHA, monomeric near-infrared fluorescent protein miRFP709
著者Pletnev, S.
登録日2017-04-17
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.
Chem Sci, 8, 2017
4KPI
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BU of 4kpi by Molmil
Rotational order-disorder structure of reversibly photoswitchable red fluorescent protein rsTagRFP
分子名称: Reversibly photoswitchable red fluorescent protein rsTagRFP
著者Pletnev, S.
登録日2013-05-13
公開日2014-02-26
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献The rotational order-disorder structure of the reversibly photoswitchable red fluorescent protein rsTagRFP.
Acta Crystallogr.,Sect.D, 70, 2014
3U8A
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BU of 3u8a by Molmil
Crystal structure of monomeric reversibly photoswitchable red fluorescent protein rsTagRFP in the OFF state
分子名称: Fluorescent protein rsTagRFP
著者Pletnev, S.
登録日2011-10-16
公開日2012-02-22
最終更新日2012-05-09
実験手法X-RAY DIFFRACTION (1.783 Å)
主引用文献A structural basis for reversible photoswitching of absorbance spectra in red fluorescent protein rsTagRFP.
J.Mol.Biol., 417, 2012
4MO2
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BU of 4mo2 by Molmil
Crystal Structure of UDP-N-acetylgalactopyranose mutase from Campylobacter jejuni
分子名称: AMMONIUM ION, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Dalrymple, S.A, Protsko, C, Poulin, M.B, Lowary, T.L, Sanders, D.A.R.
登録日2013-09-11
公開日2014-01-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Specificity of a UDP-GalNAc Pyranose-Furanose Mutase: A Potential Therapeutic Target for Campylobacter jejuni Infections.
Chembiochem, 15, 2014
8SXC
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BU of 8sxc by Molmil
Crystal Structure of Fluorescent Protein Fusion Red 2
分子名称: Far-red Fluorescent Protein Fusion Red 2, GLYCEROL, HEXAETHYLENE GLYCOL, ...
著者Pletnev, S, Pletneva, N, Pletnev, V.
登録日2023-05-21
公開日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Fluorescent Protein Fusion Red 2
To Be Published
2PXW
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BU of 2pxw by Molmil
Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.4 A Resolution (Transition State)
分子名称: GFP-like fluorescent chromoprotein FP506
著者Pletnev, S.V, Pletneva, N.V, Tikhonova, T.V, Pletnev, V.Z.
登録日2007-05-14
公開日2007-09-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
2PXS
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BU of 2pxs by Molmil
Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.2 A Resolution (Mature State)
分子名称: GFP-like fluorescent chromoprotein FP506
著者Pletnev, S.V, Pletneva, N.V, Tikhonova, T.V, Pletnev, V.Z.
登録日2007-05-14
公開日2007-09-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
8TKC
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BU of 8tkc by Molmil
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 DS-SOSIP Surface protein gp120, ...
著者Pletnev, S, Hoyt, F, Fischer, E, Kwong, P.
登録日2023-07-25
公開日2024-08-28
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Broad and potent HIV-1 neutralization in fusion peptide-primed SHIV-boosted macaques.
To Be Published
8TL2
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BU of 8tl2 by Molmil
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 DS-SOSIP Surface protein gp120, ...
著者Pletnev, S, Hoyt, F, Fischer, E, Kwong, P.
登録日2023-07-26
公開日2024-08-28
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Broad and potent HIV-1 neutralization in fusion peptide-primed SHIV-boosted macaques.
To Be Published

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件を2024-09-18に公開中

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