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PDB: 64 results

5LTC
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Crystal structure of doubly spin labelled VcSiaP R125
Descriptor: C4-dicarboxylate-binding periplasmic protein
Authors:Peter, M, Glaenzer, J, Hagelueken, G.
Deposit date:2016-09-06
Release date:2017-01-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:PELDOR Spectroscopy Reveals Two Defined States of a Sialic Acid TRAP Transporter SBP in Solution.
Biophys. J., 112, 2017
7A5C
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Crystal structure of spin labelled VcSiaP R125A bound to an artificial peptide ligand.
Descriptor: GLYCEROL, Sialic acid-binding periplasmic protein SiaP
Authors:Peter, M.F, Glaenzer, J, Hagelueken, G.
Deposit date:2020-08-21
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Triggering Closure of a Sialic Acid TRAP Transporter Substrate Binding Protein through Binding of Natural or Artificial Substrates.
J.Mol.Biol., 433, 2020
7QE5
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Structure of the membrane domains of the sialic acid TRAP transporter HiSiaQM from Haemophilus influenzae
Descriptor: Megabody3, Sialic acid TRAP transporter permease protein SiaT
Authors:Peter, M.F, Hagelueken, G.
Deposit date:2021-12-01
Release date:2022-07-27
Last modified:2022-08-17
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structural and mechanistic analysis of a tripartite ATP-independent periplasmic TRAP transporter.
Nat Commun, 13, 2022
8RMN
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Cryo-EM structure of a dimer of decameric human CALHM4 in complex with synthetic nanobody SbC4
Descriptor: Calcium homeostasis modulator protein 4, Synthetic nanobody SbC4
Authors:Peter, M, Drozdzyk, K, Dutzler, R.
Deposit date:2024-01-08
Release date:2024-06-19
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural features of heteromeric channels composed of CALHM2 and CALHM4 paralogs.
Elife, 13, 2024
242D
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BU of 242d by Molmil
MAD PHASING STRATEGIES EXPLORED WITH A BROMINATED OLIGONUCLEOTIDE CRYSTAL AT 1.65 A RESOLUTION.
Descriptor: DNA (5'-D(*CP*GP*CP*GP*(CBR)P*G)-3')
Authors:Peterson, M.R, Harrop, S.J, McSweeney, S.M, Leonard, G.A, Thompson, A.W, Hunter, W.N, Helliwell, J.R.
Deposit date:1996-06-20
Release date:1996-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:MAD Phasing Strategies Explored with a Brominated Oligonucleotide Crystal at 1.65A Resolution.
J.Synchrotron Radiat., 3, 1996
1QNG
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Plasmodium falciparum Cyclophilin complexed with Cyclosporin A
Descriptor: CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Authors:Peterson, M.R, Hall, D.R, Hunter, W.N.
Deposit date:1999-10-14
Release date:2000-10-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Three-Dimensional Structure of a Plasmodium Falciparum Cyclophilin in Complex with the Potent Anti-Malarial Cyclosporin A
J.Mol.Biol., 298, 2000
1QNH
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Plasmodium falciparum Cyclophilin (double mutant) complexed with Cyclosporin A
Descriptor: CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Authors:Peterson, M.R, Hall, D.R, Hunter, W.N.
Deposit date:1999-10-14
Release date:2000-10-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Three-Dimensional Structure of a Plasmodium Falciparum Cyclophilin in Complex with the Potent Anti-Malarial Cyclosporin A
J.Mol.Biol., 298, 2000
1HG9
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Solution structure of DNA:RNA hybrid
Descriptor: 5- D(*CP*TP*GP*AP*TP*AP*TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
Authors:Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
Deposit date:2000-12-13
Release date:2002-01-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural studies of LNA:RNA duplexes by NMR: conformations and implications for RNase H activity.
Chemistry, 6, 2000
1HHW
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Solution structure of LNA1:RNA hybrid
Descriptor: 5- D(*CP*TP*GP*AP*+TLNP*AP*TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
Authors:Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
Deposit date:2000-12-29
Release date:2002-05-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Locked Nucleic Acid (Lna) Recognition of RNA: NMR Solution Structures of Lna:RNA Hybrids
J.Am.Chem.Soc., 124, 2002
1HHX
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Solution structure of LNA3:RNA hybrid
Descriptor: 5- D(*CP*+TP*GP*AP*+TP*AP*+TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
Authors:Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
Deposit date:2000-12-29
Release date:2002-05-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Locked Nucleic Acid (Lna) Recognition of RNA: NMR Solution Structures of Lna:RNA Hybrids
J.Am.Chem.Soc., 124, 2002
7A5Q
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Crystal structure of VcSiaP bound to sialic acid
Descriptor: DctP family TRAP transporter solute-binding subunit, GLYCEROL, N-acetyl-beta-neuraminic acid, ...
Authors:Schneberger, N, Peter, M.F, Hagelueken, G.
Deposit date:2020-08-21
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Triggering Closure of a Sialic Acid TRAP Transporter Substrate Binding Protein through Binding of Natural or Artificial Substrates.
J.Mol.Biol., 433, 2020
1DKW
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CRYSTAL STRUCTURE OF TRIOSE-PHOSPHATE ISOMERASE WITH MODIFIED SUBSTRATE BINDING SITE
Descriptor: TERTIARY-BUTYL ALCOHOL, TRIOSEPHOSPHATE ISOMERASE
Authors:Norledge, B.V, Lambeir, A.M, Abagyan, R.A, Rottman, A, Fernandez, A.M, Filimonov, V.V, Peter, M.G, Wierenga, R.K.
Deposit date:1999-12-08
Release date:2000-11-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Modeling, mutagenesis, and structural studies on the fully conserved phosphate-binding loop (loop 8) of triosephosphate isomerase: toward a new substrate specificity.
Proteins, 42, 2001
1OGB
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BU of 1ogb by Molmil
Chitinase b from Serratia marcescens mutant D142N
Descriptor: CHITINASE B, GLYCEROL, SULFATE ION
Authors:Vaaje-Kolstad, G, Houston, D.R, Rao, F.V, Peter, M.G, Synstad, B, van Aalten, D.M.F, Eijsink, V.G.H.
Deposit date:2003-04-29
Release date:2004-04-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the D142N Mutant of the Family 18 Chitinase Chib from Serratia Marcescens and its Complex with Allosamidin
Biochim.Biophys.Acta, 1696, 2004
1UR8
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Interactions of a family 18 chitinase with the designed inhibitor HM508, and its degradation product, chitobiono-delta-lactone
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone, CHITINASE B, GLYCEROL, ...
Authors:Vaaje-Kolstad, G, Vasella, A, Peter, M.G, Netter, C, Houston, D.R, Westereng, B, Synstad, B, Eijsink, V.G.H, Van Aalten, D.M.F.
Deposit date:2003-10-27
Release date:2004-04-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Interactions of a Family 18 Chitinase with the Designed Inhibitor Hm508 and its Degradation Product, Chitobiono-Delta-Lactone.
J.Biol.Chem., 279, 2004
1UR9
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BU of 1ur9 by Molmil
Interactions of a family 18 chitinase with the designed inhibitor HM508, and its degradation product, chitobiono-delta-lactone
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone, CHITINASE B, GLYCEROL, ...
Authors:Vaaje-Kolstad, G, Vasella, A, Peter, M.G, Netter, C, Houston, D.R, Westereng, B, Synstad, B, Eijsink, V.G.H, Van Aalten, D.M.F.
Deposit date:2003-10-27
Release date:2004-04-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Interactions of a Family 18 Chitinase with the Designed Inhibitor Hm508 and its Degradation Product, Chitobiono-Delta-Lactone.
J.Biol.Chem., 279, 2004
1OGG
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BU of 1ogg by Molmil
chitinase b from serratia marcescens mutant d142n in complex with inhibitor allosamidin
Descriptor: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-allopyranose, ALLOSAMIZOLINE, CHITINASE B, ...
Authors:Vaaje-Kolstad, G, Houston, D.R, Rao, F.V, Peter, M.G, Synstad, B, van Aalten, D.M.F, Eijsink, V.G.H.
Deposit date:2003-04-30
Release date:2004-04-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structure of the D142N Mutant of the Family 18 Chitinase Chib from Serratia Marcescens and its Complex with Allosamidin
Biochim.Biophys.Acta, 1696, 2004
2L4F
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BU of 2l4f by Molmil
NMR structure of the UBA domain of S. cerevisiae Dcn1 bound to ubiquitin
Descriptor: Defective in cullin neddylation protein 1
Authors:Burschowsky, D, Mattle, D, Rudolf, F, Peter, M, Wider, G.
Deposit date:2010-10-05
Release date:2011-10-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural analysis of the ubiquitin-associated domain (UBA) of yeast Dcn1 in complex with ubiquitin
To be Published
2L4E
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BU of 2l4e by Molmil
NMR structure of the UBA domain of S. cerevisiae Dcn1
Descriptor: Defective in cullin neddylation protein 1
Authors:Burschowsky, D, Rudolf, F, Mattle, D, Peter, M, Wider, G.
Deposit date:2010-10-05
Release date:2011-10-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural analysis of the ubiquitin-associated domain (UBA) of yeast Dcn1 in complex with ubiquitin
To be Published
8CP7
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Structure of the disulfide-locked substrate binding protein HiSiaP.
Descriptor: N-acetyl-beta-neuraminic acid, Sialic acid-binding periplasmic protein SiaP, ZINC ION
Authors:Kim, Y, Peter, M.F, Hagelueken, G.
Deposit date:2023-03-02
Release date:2023-12-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational coupling of the sialic acid TRAP transporter HiSiaQM with its substrate binding protein HiSiaP.
Nat Commun, 15, 2024
8PD8
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BU of 8pd8 by Molmil
cAMP-bound SpSLC9C1 in lipid nanodiscs, dimer
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-12
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PD3
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Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 2
Descriptor: Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-11
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PD7
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Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 4
Descriptor: Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-11
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PCZ
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BU of 8pcz by Molmil
Ligand-free SpSLC9C1 in lipid nanodiscs, dimer
Descriptor: Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-11
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PD2
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Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 1
Descriptor: Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-11
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PD5
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Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 3
Descriptor: Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-11
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023

 

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