Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 386 results

3QU5
DownloadVisualize
BU of 3qu5 by Molmil
Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, asp11asn mutant
Descriptor: CHLORIDE ION, INORGANIC PYROPHOSPHATASE
Authors:Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI)
Deposit date:2011-02-23
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase.
Biochemistry, 50, 2011
3QQV
DownloadVisualize
BU of 3qqv by Molmil
Crystal structure of geranylgeranyl pyrophosphate synthase from corynebacterium glutamicum complexed with isoprenyl diphosphate and magnesium
Descriptor: DIMETHYLALLYL DIPHOSPHATE, GLYCEROL, Geranylgeranyl pyrophosphate synthase, ...
Authors:Patskovsky, Y, Toro, R, Sauder, J.M, Poulter, C.D, Gerlt, J.A, Burley, S.K, Almo, S.C, Enzyme Function Initiative (EFI), New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-02-16
Release date:2011-03-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
3MWC
DownloadVisualize
BU of 3mwc by Molmil
Crystal structure of probable o-succinylbenzoic acid synthetase from kosmotoga olearia
Descriptor: MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein, PHOSPHATE ION
Authors:Patskovsky, Y, Toro, R, Dickey, M, Sauder, J.M, Gerlt, J, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-05-05
Release date:2010-05-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of O-Succinylbenzoic Acid Synthetase from Kosmotoga Olearia
To be Published
3N28
DownloadVisualize
BU of 3n28 by Molmil
Crystal structure of probable phosphoserine phosphatase from vibrio cholerae, unliganded form
Descriptor: Phosphoserine phosphatase, SULFATE ION
Authors:Patskovsky, Y, Ramagopal, U, Toro, R, Rutter, M, Miller, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-05-17
Release date:2010-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Phosphoserine Phosphatase from Vibrio Cholerae
To be Published
3MZN
DownloadVisualize
BU of 3mzn by Molmil
Crystal structure of probable glucarate dehydratase from chromohalobacter salexigens dsm 3043
Descriptor: ACETATE ION, GLYCEROL, Glucarate dehydratase, ...
Authors:Patskovsky, Y, Toro, R, Rutter, M, Sauder, J.M, Gerlt, J.A, Almo, S.C, Burley, S.K, New York Structural GenomiX Research Consortium (NYSGXRC), New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-05-12
Release date:2010-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of Glucarate Dehydratase from Chromohalobacter Salexigens
To be Published
3SJN
DownloadVisualize
BU of 3sjn by Molmil
Crystal structure of enolase Spea_3858 (target EFI-500646) from Shewanella pealeana with magnesium bound
Descriptor: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein, ...
Authors:Patskovsky, Y, Kim, J, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-06-21
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Enolase Spea_3858 from Shewanella Pealeana
To be Published
3N05
DownloadVisualize
BU of 3n05 by Molmil
CRYSTAL STRUCTURE OF NH3-DEPENDENT NAD+ SYNTHETASE FROM STREPTOMYCES AVERMITILIS
Descriptor: NH(3)-dependent NAD(+) synthetase, SULFATE ION
Authors:Patskovsky, Y, Toro, R, Freeman, J, Do, J, Sauder, J.M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-05-13
Release date:2010-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure of Nh3-Dependent Nad+ Synthetase from Streptomyces Avermitilis
To be Published
3P9X
DownloadVisualize
BU of 3p9x by Molmil
Crystal structure of phosphoribosylglycinamide formyltransferase from Bacillus Halodurans
Descriptor: GLYCEROL, SULFATE ION, phosphoribosylglycinamide formyltransferase
Authors:Patskovsky, Y, Toro, R, Foti, R, Seidel, R.D, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2010-10-18
Release date:2011-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of phosphoribosylglycinamide formyltransferase from Bacillus Halodurans
To be Published
3OYR
DownloadVisualize
BU of 3oyr by Molmil
Crystal structure of polyprenyl synthase from Caulobacter crescentus CB15 complexed with calcium and isoprenyl diphosphate
Descriptor: CALCIUM ION, DIMETHYLALLYL DIPHOSPHATE, PYROPHOSPHATE 2-, ...
Authors:Patskovsky, Y, Toro, R, Rutter, M, Sauder, J.M, Burley, S.K, Poulter, C.D, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-09-23
Release date:2010-10-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
3P8R
DownloadVisualize
BU of 3p8r by Molmil
CRYSTAL STRUCTURE OF POLYPRENYL SYNTHASE FROM Vibrio cholerae
Descriptor: Geranyltranstransferase
Authors:Patskovsky, Y, Toro, R, Dickey, M, Sauder, J.M, Burley, S.K, Poulter, C.D, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-10-14
Release date:2010-10-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
3RJL
DownloadVisualize
BU of 3rjl by Molmil
Crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from Bacillus licheniformis (Target NYSGRC-000337)
Descriptor: 1-pyrroline-5-carboxylate dehydrogenase, ACETATE ION, CADMIUM ION
Authors:Patskovsky, Y, Toro, R, Foti, R, Seidel, R.D, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-04-15
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of 1-Pyrroline-5-Carboxylate Dehydrogenase from Bacillus Licheniformis
To be Published
7MKB
DownloadVisualize
BU of 7mkb by Molmil
Human leukocyte antigen A*0201 in complex with SARS-CoV-2 epitope YLQPRTFLL
Descriptor: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
Authors:Nyovanie, S.T, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-04-22
Release date:2021-05-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human leukocyte antigen A*0201 in complex with SARS-CoV-2 epitope YLQPRTFLL
To be Published
4YS6
DownloadVisualize
BU of 4ys6 by Molmil
CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM CLOSTRIDIUM PHYTOFERMENTANS (Cphy_1585, TARGET EFI-511156) WITH BOUND BETA-D-GLUCOSE
Descriptor: CHLORIDE ION, Putative solute-binding component of ABC transporter, SODIUM ION, ...
Authors:Vetting, M.W, Patskovsky, Y, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Koss, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2015-03-16
Release date:2015-04-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM CLOSTRIDIUM PHYTOFERMENTANS (Cphy_1585, TARGET EFI-511156) WITH BOUND BETA-D-GLUCOSE
To be published
5E83
DownloadVisualize
BU of 5e83 by Molmil
CRYSTAL STRUCTURE OF CARBONMONOXY HEMOGLOBIN S (LIGANDED SICKLE CELL HEMOGLOBIN) COMPLEXED WITH GBT440, CO-CRYSTALLIZATION EXPERIMENT
Descriptor: 2-methyl-3-({2-[1-(propan-2-yl)-1H-pyrazol-5-yl]pyridin-3-yl}methoxy)phenol, CARBON MONOXIDE, GLYCEROL, ...
Authors:Patskovska, L, Patskovsky, Y, Bonanno, J.B, Almo, S.C.
Deposit date:2015-10-13
Release date:2016-07-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:GBT440 increases haemoglobin oxygen affinity, reduces sickling and prolongs RBC half-life in a murine model of sickle cell disease.
Br.J.Haematol., 175, 2016
4YV7
DownloadVisualize
BU of 4yv7 by Molmil
CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM MYCOBACTERIUM SMEGMATIS (MSMEI_3018, TARGET EFI-511327) WITH BOUND GLYCEROL
Descriptor: GLYCEROL, Periplasmic binding protein/LacI transcriptional regulator
Authors:Vetting, M.W, Patskovsky, Y, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Koss, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2015-03-19
Release date:2015-04-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM MYCOBACTERIUM SMEGMATIS (MSMEI_3018, TARGET EFI-511327) WITH BOUND GLYCEROL
To be published
1NEJ
DownloadVisualize
BU of 1nej by Molmil
Crystalline Human Carbonmonoxy Hemoglobin S (Liganded Sickle Cell Hemoglobin) Exhibits The R2 Quaternary State At Neutral pH In The Presence Of Polyethylene Glycol: The 2.1 Angstrom Resolution Crystal Structure
Descriptor: CARBON MONOXIDE, Hemoglobin alpha chain, Hemoglobin beta chain, ...
Authors:Patskovska, L.N, Patskovsky, Y.V, Almo, S.C, Hirsch, R.E.
Deposit date:2002-12-11
Release date:2003-12-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:COHbC and COHbS crystallize in the R2 quaternary state at neutral pH in the presence of PEG 4000.
Acta Crystallogr.,Sect.D, 61, 2005
2Q08
DownloadVisualize
BU of 2q08 by Molmil
Crystal structure of the protein BH0493 from Bacillus halodurans C-125 complexed with ZN
Descriptor: BH0493 protein, ZINC ION
Authors:Fedorov, A.A, Fedorov, E.V, Patskovsky, Y, Sauder, J.M, Burley, S.K, Raushel, F, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-05-21
Release date:2007-06-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Glucoronate Isomerase from Bacillus halodurans.
To be Published
3BUT
DownloadVisualize
BU of 3but by Molmil
Crystal structure of protein Af_0446 from Archaeoglobus fulgidus
Descriptor: Uncharacterized protein Af_0446
Authors:Bonanno, J.B, Patskovsky, Y, Ozyurt, S, Ashok, S, Zhang, F, Groshong, C, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-01-03
Release date:2008-01-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of protein Af_0446 from Archaeoglobus fulgidus.
To be Published
3BRS
DownloadVisualize
BU of 3brs by Molmil
Crystal structure of sugar transporter from Clostridium phytofermentans
Descriptor: Periplasmic binding protein/LacI transcriptional regulator
Authors:Malashkevich, V.N, Patskovsky, Y, Toro, R, Meyers, A.J, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-12-21
Release date:2008-02-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of sugar transporter from Clostridium phytofermentans.
To be Published
3K51
DownloadVisualize
BU of 3k51 by Molmil
Crystal Structure of DcR3-TL1A complex
Descriptor: Decoy receptor 3, Tumor necrosis factor ligand superfamily member 15, secreted form
Authors:Zhan, C, Patskovsky, Y, Yan, Q, Li, Z, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2009-10-06
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Decoy Strategies: The Structure of TL1A:DcR3 Complex.
Structure, 19, 2011
3KRM
DownloadVisualize
BU of 3krm by Molmil
Imp1 kh34
Descriptor: GLYCEROL, Insulin-like growth factor 2 mRNA-binding protein 1
Authors:Chao, J.A, Singer, R.H, Almo, S.C, Patskovsky, Y.
Deposit date:2009-11-18
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:ZBP1 recognition of beta-actin zipcode induces RNA looping.
Genes Dev., 24, 2010
3KRT
DownloadVisualize
BU of 3krt by Molmil
CRYSTAL STRUCTURE OF putative crotonyl CoA reductase from Streptomyces coelicolor A3(2)
Descriptor: CHLORIDE ION, Crotonyl CoA reductase
Authors:Malashkevich, V.N, Patskovsky, Y, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-11-19
Release date:2009-12-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:CRYSTAL STRUCTURE OF putative crotonyl CoA reductase from Streptomyces coelicolor A3(2)
To be Published
1K1K
DownloadVisualize
BU of 1k1k by Molmil
Structure of Mutant Human Carbonmonoxyhemoglobin C (beta E6K) at 2.0 Angstrom Resolution in Phosphate Buffer.
Descriptor: CARBON MONOXIDE, HEMOGLOBIN ALPHA CHAIN, HEMOGLOBIN BETA CHAIN, ...
Authors:Dewan, J.C, Taylor-Feeling, A, Puius, Y.A, Patskovska, L, Patskovsky, Y, Nagel, R.L, Almo, S.C, Hirsch, R.E.
Deposit date:2001-09-25
Release date:2002-12-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of mutant human carbonmonoxyhemoglobin C (betaE6K) at 2.0 A resolution.
Acta Crystallogr.,Sect.D, 58, 2002
1M9P
DownloadVisualize
BU of 1m9p by Molmil
Crystalline Human Carbonmonoxy Hemoglobin C Exhibits The R2 Quaternary State at Neutral pH In The Presence of Polyethylene Glycol: The 2.1 Angstrom Resolution Crystal Structure
Descriptor: CARBON MONOXIDE, Hemoglobin alpha chain, Hemoglobin beta chain, ...
Authors:Patskovska, L.N, Patskovsky, Y.V, Almo, S.C, Hirsch, R.E.
Deposit date:2002-07-29
Release date:2003-08-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:COHbC and COHbS crystallize in the R2 quaternary state at neutral pH in the presence of PEG 4000.
Acta Crystallogr.,Sect.D, 61, 2005
1TWY
DownloadVisualize
BU of 1twy by Molmil
Crystal structure of an ABC-type phosphate transport receptor from Vibrio cholerae
Descriptor: ABC transporter, periplasmic substrate-binding protein, MAGNESIUM ION, ...
Authors:Ramagopal, U.A, Patskovsky, Y, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-07-01
Release date:2004-12-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of hypothetical ABC-type phosphate transporter
To be Published

227561

數據於2024-11-20公開中

PDB statisticsPDBj update infoContact PDBjnumon