7E8N
 
 | | Crystal structure of Type II citrate synthase (HyCS) from Hymenobacter sp. PAMC 26554 | | Descriptor: | CITRIC ACID, Citrate synthase | | Authors: | Park, S.-H, Lee, C.W, Bae, D.-W, Lee, J.H. | | Deposit date: | 2021-03-02 | | Release date: | 2022-01-12 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Structural basis of the cooperative activation of type II citrate synthase (HyCS) from Hymenobacter sp. PAMC 26554.
Int.J.Biol.Macromol., 183, 2021
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2JPX
 | | A18H Vpu TM structure in lipid bilayers | | Descriptor: | Vpu protein | | Authors: | Park, S, Opella, S.J. | | Deposit date: | 2007-05-25 | | Release date: | 2007-11-13 | | Last modified: | 2023-12-20 | | Method: | SOLUTION NMR | | Cite: | Conformational changes induced by a single amino acid substitution in the trans-membrane domain of Vpu: implications for HIV-1 susceptibility to channel blocking drugs
Protein Sci., 16, 2007
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2KSJ
 | | Structure and Dynamics of the Membrane-bound form of Pf1 Coat Protein: Implications for Structural Rearrangement During Virus Assembly | | Descriptor: | Capsid protein G8P | | Authors: | Park, S, Marassi, F, Black, D, Opella, S.J. | | Deposit date: | 2010-01-05 | | Release date: | 2010-11-10 | | Last modified: | 2024-05-01 | | Method: | SOLID-STATE NMR, SOLUTION NMR | | Cite: | Structure and dynamics of the membrane-bound form of Pf1 coat protein: implications of structural rearrangement for virus assembly.
Biophys.J., 99, 2010
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2LNL
 | | Structure of human CXCR1 in phospholipid bilayers | | Descriptor: | C-X-C chemokine receptor type 1 | | Authors: | Park, S, Das, B.B, Casagrande, F, Nothnagel, H, Chu, M, Kiefer, H, Maier, K, De Angelis, A, Marassi, F.M, Opella, S.J. | | Deposit date: | 2011-12-31 | | Release date: | 2012-10-17 | | Last modified: | 2016-04-27 | | Method: | SOLID-STATE NMR | | Cite: | Structure of the chemokine receptor CXCR1 in phospholipid bilayers.
Nature, 491, 2012
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6A9B
 | | T4 dCMP hydroxymethylase structure solved by I-SAD using a home source | | Descriptor: | Deoxycytidylate 5-hydroxymethyltransferase, IODIDE ION, PHOSPHATE ION | | Authors: | Park, S.H, Song, H.K. | | Deposit date: | 2018-07-12 | | Release date: | 2019-01-02 | | Last modified: | 2024-03-27 | | Method: | X-RAY DIFFRACTION (2.01 Å) | | Cite: | A cytosine modification mechanism revealed by the structure of a ternary complex of deoxycytidylate hydroxymethylase from bacteriophage T4 with its cofactor and substrate.
Iucrj, 6, 2019
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4YUS
 | | Crystal structure of photoactivated adenylyl cyclase of a cyanobacteriaOscillatoria acuminata in hexagonal form | | Descriptor: | FLAVIN MONONUCLEOTIDE, Family 3 adenylate cyclase | | Authors: | Park, S.-Y, Ohki, M, Sugiyama, K, Kawai, F, Iseki, M. | | Deposit date: | 2015-03-19 | | Release date: | 2016-06-01 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Structural insight into photoactivation of an adenylate cyclase from a photosynthetic cyanobacterium
Proc.Natl.Acad.Sci.USA, 113, 2016
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4YUT
 | | Crystal structure of photoactivated adenylyl cyclase of a cyanobacteriaOscillatoria acuminata in orthorhombic form | | Descriptor: | FLAVIN MONONUCLEOTIDE, Family 3 adenylate cyclase | | Authors: | Park, S.-Y, Ohki, M, Sugiyama, K, Kawai, F, Iseki, M. | | Deposit date: | 2015-03-19 | | Release date: | 2016-06-01 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.9 Å) | | Cite: | Structural insight into photoactivation of an adenylate cyclase from a photosynthetic cyanobacterium
Proc.Natl.Acad.Sci.USA, 113, 2016
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5Y6C
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5Y6B
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6LXX
 | | Frog EPDR1 with an Ir atom | | Descriptor: | CALCIUM ION, CHLORIDE ION, Ependymin-related 1, ... | | Authors: | Park, S, Park, J. | | Deposit date: | 2020-02-12 | | Release date: | 2021-02-17 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | A Single Soaked Iridium (IV) Ion Observed in the Frog Ependymin-Related Protein.
Bull.Korean Chem.Soc., 41, 2020
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3WX7
 | | Crystal structure of COD | | Descriptor: | ACETATE ION, CALCIUM ION, Chitin oligosaccharide deacetylase, ... | | Authors: | Park, S.-Y, Sugiyama, K, Hirano, T, Nishio, T. | | Deposit date: | 2014-07-18 | | Release date: | 2014-12-03 | | Last modified: | 2019-04-03 | | Method: | X-RAY DIFFRACTION (1.349 Å) | | Cite: | Structure-based analysis of domain function of chitin oligosaccharide deacetylase from Vibrio parahaemolyticus.
FEBS Lett., 589, 2015
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7MBM
 | | Cryo-EM structure of MLL1-NCP (H3K4M) complex, mode01 | | Descriptor: | DNA (145-MER), Histone H2A, Histone H2B 1.1, ... | | Authors: | Park, S.H, Ayoub, A, Lee, Y.T, Dou, Y, Cho, U. | | Deposit date: | 2021-04-01 | | Release date: | 2021-12-29 | | Last modified: | 2024-05-29 | | Method: | ELECTRON MICROSCOPY | | Cite: | Regulation of MLL1 Methyltransferase Activity in Two Distinct Nucleosome Binding Modes.
Biochemistry, 61, 2022
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7MBN
 | | Cryo-EM structure of MLL1-NCP (H3K4M) complex, mode02 | | Descriptor: | DNA (146-MER), Histone H2A, Histone H2B 1.1, ... | | Authors: | Park, S.H, Ayoub, A, Lee, Y.T, Dou, Y, Cho, U. | | Deposit date: | 2021-04-01 | | Release date: | 2021-12-29 | | Last modified: | 2024-05-29 | | Method: | ELECTRON MICROSCOPY | | Cite: | Regulation of MLL1 Methyltransferase Activity in Two Distinct Nucleosome Binding Modes.
Biochemistry, 61, 2022
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3H1T
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4YWV
 | | Structural insight into the substrate inhibition mechanism of NADP+-dependent succinic semialdehyde dehydrogenase from Streptococcus pyogenes | | Descriptor: | 4-oxobutanoic acid, SULFATE ION, Succinic semialdehyde dehydrogenase | | Authors: | Park, S.A, Jang, E.H, Chi, Y.M, Lee, K.S. | | Deposit date: | 2015-03-21 | | Release date: | 2015-05-06 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Structural insight into the substrate inhibition mechanism of NADP(+)-dependent succinic semialdehyde dehydrogenase from Streptococcus pyogenes.
Biochem.Biophys.Res.Commun., 461, 2015
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2DN1
 | | 1.25A resolution crystal structure of human hemoglobin in the oxy form | | Descriptor: | Hemoglobin alpha subunit, Hemoglobin beta subunit, OXYGEN MOLECULE, ... | | Authors: | Park, S.-Y, Yokoyama, T, Shibayama, N, Shiro, Y, Tame, J.R. | | Deposit date: | 2006-04-25 | | Release date: | 2006-05-09 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.25 Å) | | Cite: | 1.25 a resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms.
J.Mol.Biol., 360, 2006
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2DN3
 | | 1.25A resolution crystal structure of human hemoglobin in the carbonmonoxy form | | Descriptor: | CARBON MONOXIDE, Hemoglobin alpha subunit, Hemoglobin beta subunit, ... | | Authors: | Park, S.-Y, Yokoyama, T, Shibayama, N, Shiro, Y, Tame, J.R. | | Deposit date: | 2006-04-25 | | Release date: | 2006-05-09 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.25 Å) | | Cite: | 1.25 a resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms.
J.Mol.Biol., 360, 2006
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2DN2
 | | 1.25A resolution crystal structure of human hemoglobin in the deoxy form | | Descriptor: | Hemoglobin alpha subunit, Hemoglobin beta subunit, PROTOPORPHYRIN IX CONTAINING FE | | Authors: | Park, S.-Y, Yokoyama, T, Shibayama, N, Shiro, Y, Tame, J.R. | | Deposit date: | 2006-04-25 | | Release date: | 2006-05-09 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (1.25 Å) | | Cite: | 1.25 a resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms.
J.Mol.Biol., 360, 2006
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1UIW
 | | Crystal Structures of Unliganded and Half-Liganded Human Hemoglobin Derivatives Cross-Linked between Lys 82beta1 and Lys 82beta2 | | Descriptor: | BUT-2-ENEDIAL, Hemoglobin alpha chain, Hemoglobin beta chain, ... | | Authors: | Park, S.-Y, Shibayama, N, Tame, J.R.H. | | Deposit date: | 2003-07-23 | | Release date: | 2003-08-12 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (1.5 Å) | | Cite: | Crystal structures of unliganded and half-liganded human hemoglobin derivatives cross-linked between Lys 82beta1 and Lys 82beta2
Biochemistry, 43, 2004
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1PI7
 | | Structure of the channel-forming trans-membrane domain of Virus protein "u" (Vpu) from HIV-1 | | Descriptor: | VPU protein | | Authors: | Park, S.H, Mrse, A.A, Nevzorov, A.A, Mesleh, M.F, Oblatt-Montal, M, Montal, M, Opella, S.J. | | Deposit date: | 2003-05-29 | | Release date: | 2003-11-11 | | Last modified: | 2024-05-22 | | Method: | SOLID-STATE NMR | | Cite: | Three-dimensional structure of the channel-forming trans-membrane domain of virus protein "u" (Vpu) from HIV-1
J.Mol.Biol., 333, 2003
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1PI8
 | | Structure of the channel-forming trans-membrane domain of Virus protein "u" (Vpu) from HIV-1 | | Descriptor: | VPU protein | | Authors: | Park, S.H, Mrse, A.A, Nevzorov, A.A, Mesleh, M.F, Oblatt-Montal, M, Montal, M, Opella, S.J. | | Deposit date: | 2003-05-29 | | Release date: | 2003-11-11 | | Last modified: | 2024-05-22 | | Method: | SOLID-STATE NMR | | Cite: | Three-dimensional structure of the channel-forming trans-membrane domain of virus protein "u" (Vpu) from HIV-1
J.Mol.Biol., 333, 2003
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1PJE
 | | Structure of the channel-forming trans-membrane domain of Virus protein "u"(Vpu) from HIV-1 | | Descriptor: | VPU protein | | Authors: | Park, S.H, Mrse, A.A, Nevzorov, A.A, Mesleh, M.F, Oblatt-Montal, M, Montal, M, Opella, S.J. | | Deposit date: | 2003-06-02 | | Release date: | 2003-10-14 | | Last modified: | 2024-05-22 | | Method: | SOLID-STATE NMR | | Cite: | Three-dimensional structure of the channel-forming trans-membrane domain of Virus protein "u" (Vpu) from HIV-1
J.Mol.Biol., 333, 2003
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3UFB
 | | Crystal structure of a modification subunit of a putative type I restriction enzyme from Vibrio vulnificus YJ016 | | Descriptor: | Type I restriction-modification system methyltransferase subunit | | Authors: | Park, S.Y, Lee, H.J, Sun, J, Nishi, K, Song, J.M, Kim, J.S. | | Deposit date: | 2011-11-01 | | Release date: | 2012-11-07 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Structural characterization of a modification subunit of a putative type I restriction enzyme from Vibrio vulnificus YJ016
Acta Crystallogr.,Sect.D, 68, 2012
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3OZQ
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5FGM
 | | Streptomyces coelicolor SigR region 4 | | Descriptor: | ECF RNA polymerase sigma factor SigR | | Authors: | Park, S.Y. | | Deposit date: | 2015-12-21 | | Release date: | 2016-03-02 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | In Streptomyces coelicolor SigR, methionine at the -35 element interacting region 4 confers the -31'-adenine base selectivity
Biochem.Biophys.Res.Commun., 470, 2016
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