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PDB: 497 件

1GEM
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STRUCTURAL CHARACTERIZATION OF N-BUTYL-ISOCYANIDE COMPLEXES OF CYTOCHROMES P450NOR AND P450CAM
分子名称: CYTOCHROME P450CAM, N-BUTYL ISOCYANIDE, PROTOPORPHYRIN IX CONTAINING FE
著者Lee, D.-S, Park, S.-Y, Yamane, K, Shiro, Y.
登録日2000-11-13
公開日2000-12-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural characterization of n-butyl-isocyanide complexes of cytochromes P450nor and P450cam.
Biochemistry, 40, 2001
1GEK
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BU of 1gek by Molmil
STRUCTURAL CHARACTERIZATION OF N-BUTYL-ISOCYANIDE COMPLEXES OF CYTOCHROMES P450NOR AND P450CAM
分子名称: CYTOCHROME P450CAM, N-BUTYL ISOCYANIDE, PROTOPORPHYRIN IX CONTAINING FE
著者Lee, D.-S, Park, S.-Y, Yamane, K, Shiro, Y.
登録日2000-11-13
公開日2000-12-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural characterization of n-butyl-isocyanide complexes of cytochromes P450nor and P450cam.
Biochemistry, 40, 2001
6D3W
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BU of 6d3w by Molmil
Chromosomal trehalose-6-phosphate phosphatase from P. aeruginosa
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, CALCIUM ION, ...
著者Hofmann, A, Cross, M, Park, S.-Y.
登録日2018-04-17
公開日2018-05-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Trehalose 6-phosphate phosphatases of Pseudomonas aeruginosa.
FASEB J., 32, 2018
5Z2E
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BU of 5z2e by Molmil
Dipicolinate bound Dihydrodipicolinate reductase from Paenisporosarcina sp. TG-14
分子名称: Dihydrodipicolinate reductase, PYRIDINE-2,6-DICARBOXYLIC ACID
著者Lee, J.H, Lee, C.W, Park, S.
登録日2018-01-02
公開日2018-06-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of dihydrodipicolinate reductase (PaDHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor
Sci Rep, 8, 2018
6D3V
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BU of 6d3v by Molmil
Chromosomal trehalose-6-phosphate phosphatase from P. aeruginosa
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, NICKEL (II) ION, ...
著者Hofmann, A, Cross, M, Park, S.-Y.
登録日2018-04-17
公開日2018-05-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Trehalose 6-phosphate phosphatases of Pseudomonas aeruginosa.
FASEB J., 32, 2018
5Z2F
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BU of 5z2f by Molmil
NADPH/PDA bound Dihydrodipicolinate reductase from Paenisporosarcina sp. TG-14
分子名称: Dihydrodipicolinate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PYRIDINE-2,6-DICARBOXYLIC ACID
著者Lee, J.H, Lee, C.W, Park, S.
登録日2018-01-02
公開日2018-06-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of dihydrodipicolinate reductase (PaDHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor
Sci Rep, 8, 2018
5Z2D
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BU of 5z2d by Molmil
Dihydrodipicolinate reductase from Paenisporosarcina sp. TG-14
分子名称: dihydrodipicolinate reductase
著者Lee, J.H, Lee, C.W, Park, S.
登録日2018-01-02
公開日2019-01-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of dihydrodipicolinate reductase (PaDHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor
Sci Rep, 8, 2018
6AB9
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BU of 6ab9 by Molmil
The crystal structure of the relaxed state of Nonlabens marinus Rhodopsin 3
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.-H, Ohki, M, Park, J.-H, Jin, Z, Lee, W, Liu, H, Tame, J.R.H, Shibayama, N, Park, S.-Y.
登録日2018-07-20
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The pumping mechanism of NM-R3, a light-driven cyanobacterial chloride importer in the rhodopsin family
To Be Published
6ABA
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BU of 6aba by Molmil
The crystal structure of the photoactivated state of Nonlabens marinus Rhodopsin 3
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.-H, Ohki, M, Park, J.-H, Jin, Z, Lee, W, Liu, H, Tame, J.R.H, Shibayama, N, Park, S.-Y.
登録日2018-07-20
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献The pumping mechanism of NM-R3, a light-driven marine bacterial chloride importer in the rhodopsin family
To Be Published
1GDV
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BU of 1gdv by Molmil
CRYSTAL STRUCTURE OF CYTOCHROME C6 FROM RED ALGA PORPHYRA YEZOENSIS AT 1.57 A RESOLUTION
分子名称: CYTOCHROME C6, HEME C
著者Yamada, S, Park, S.-Y, Shimizu, H, Shiro, Y, Oku, T.
登録日2000-10-06
公開日2001-04-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structure of cytochrome c6 from the red alga Porphyra yezoensis at 1. 57 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
7FCI
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BU of 7fci by Molmil
human NTCP in complex with YN69083 Fab
分子名称: Fab Heavy chain, Fab Light chain, Sodium/bile acid cotransporter
著者Park, J.H, Iwamoto, M, Yun, J.H, Uchikubo-Kamo, T, Son, D, Jin, Z, Yoshida, H, Ohki, M, Ishimoto, N, Mizutani, K, Oshima, M, Muramatsu, M, Wakita, T, Shirouzu, M, Liu, K, Uemura, T, Nomura, N, Iwata, S, Watashi, K, Tame, J.R.H, Nishizawa, T, Lee, W, Park, S.Y.
登録日2021-07-14
公開日2022-05-25
最終更新日2022-07-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insights into the HBV receptor and bile acid transporter NTCP.
Nature, 606, 2022
3QJN
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BU of 3qjn by Molmil
Structural flexibility of Shank PDZ domain is important for its binding to different ligands
分子名称: Beta-PIX, SH3 and multiple ankyrin repeat domains protein 1
著者Lee, J.H, Park, H, Park, S.J, Kim, H.J, Eom, S.H.
登録日2011-01-30
公開日2011-04-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献The structural flexibility of the shank1 PDZ domain is important for its binding to different ligands
Biochem.Biophys.Res.Commun., 407, 2011
7Y28
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BU of 7y28 by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-[6-(3-fluorophenyl)benzimidazol-1-yl]-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-09
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y3S
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BU of 7y3s by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-(6-bromanyl-7-methyl-imidazo[4,5-b]pyridin-3-yl)-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-12
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y1W
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BU of 7y1w by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: (2R,3S)-2-[3-[4,5-bis(chloranyl)benzimidazol-1-yl]propyl]piperidin-3-ol, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-09
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y1H
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BU of 7y1h by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
分子名称: 1-(5-chloranyl-4-methyl-benzimidazol-1-yl)-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
著者Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
登録日2022-06-08
公開日2023-07-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
1EHG
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BU of 1ehg by Molmil
CRYSTAL STRUCTURES OF CYTOCHROME P450NOR AND ITS MUTANTS (SER286 VAL, THR) IN THE FERRIC RESTING STATE AT CRYOGENIC TEMPERATURE: A COMPARATIVE ANALYSIS WITH MONOOXYGENASE CYTOCHROME P450S
分子名称: CYTOCHROME P450NOR, PROTOPORPHYRIN IX CONTAINING FE
著者Shimizu, H, Park, S.
登録日2000-02-21
公開日2000-08-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of cytochrome P450nor and its mutants (Ser286-->Val, Thr) in the ferric resting state at cryogenic temperature: a comparative analysis with monooxygenase cytochrome P450s.
J.Inorg.Biochem., 81, 2000
1EHF
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BU of 1ehf by Molmil
CRYSTAL STRUCTURES OF CYTOCHROME P450NOR AND ITS MUTANTS (SER286 VAL, THR) IN THE FERRIC RESTING STATE AT CRYOGENIC TEMPERATURE: A COMPARATIVE ANALYSIS WITH MONOOXYGENASE CYTOCHROME P450S
分子名称: CYTOCHROME P450NOR, PROTOPORPHYRIN IX CONTAINING FE
著者Shimizu, H, Park, S.
登録日2000-02-21
公開日2000-08-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of cytochrome P450nor and its mutants (Ser286-->Val, Thr) in the ferric resting state at cryogenic temperature: a comparative analysis with monooxygenase cytochrome P450s.
J.Inorg.Biochem., 81, 2000
1EHE
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BU of 1ehe by Molmil
CRYSTAL STRUCTURES OF CYTOCHROME P450NOR AND ITS MUTANTS (SER286 VAL, THR) IN THE FERRIC RESTING STATE AT CRYOGENIC TEMPERATURE: A COMPARATIVE ANALYSIS WITH MONOOXYGENASE CYTOCHROME P450S
分子名称: CYTOCHROME P450NOR, PROTOPORPHYRIN IX CONTAINING FE
著者Shimizu, H, Park, S.
登録日2000-02-21
公開日2000-08-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of cytochrome P450nor and its mutants (Ser286-->Val, Thr) in the ferric resting state at cryogenic temperature: a comparative analysis with monooxygenase cytochrome P450s.
J.Inorg.Biochem., 81, 2000
3QJM
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BU of 3qjm by Molmil
Structural flexibility of Shank PDZ domain is important for its binding to different ligands
分子名称: Beta-PIX, SH3 and multiple ankyrin repeat domains protein 1
著者Lee, J.H, Park, H, Park, S.J, Kim, H.J, Eom, S.H.
登録日2011-01-30
公開日2011-04-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.311 Å)
主引用文献The structural flexibility of the shank1 PDZ domain is important for its binding to different ligands
Biochem.Biophys.Res.Commun., 407, 2011
2B9L
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BU of 2b9l by Molmil
Crystal structure of prophenoloxidase activating factor-II from the beetle Holotrichia diomphalia
分子名称: CALCIUM ION, SULFATE ION, alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Piao, S, Song, Y.-L, Park, S.Y, Lee, B.L, Oh, B.-H, Ha, N.-C.
登録日2005-10-12
公開日2006-01-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a clip-domain serine protease and functional roles of the clip domains.
Embo J., 24, 2005
4B04
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BU of 4b04 by Molmil
Crystal structure of the Catalytic Domain of Human DUSP26 (C152S)
分子名称: DUAL SPECIFICITY PROTEIN PHOSPHATASE 26
著者Won, E.-Y, Lee, D.Y, Park, S.G, Yokoyama, S, Kim, S.J, Chi, S.-W.
登録日2012-06-28
公開日2013-05-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献High-Resolution Crystal Structure of the Catalytic Domain of Human Dual-Specificity Phosphatase 26
Acta Crystallogr.,Sect.D, 69, 2013
7DP1
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Crystal structure of FMN and NADPH-dependent nitroreductase NfnB mutant Y88A derived from sphigopyxis sp. strain HMH
分子名称: FLAVIN MONONUCLEOTIDE, Nitroreductase family protein
著者Kim, S.H, Park, S, Rhee, S.
登録日2020-12-17
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.003496 Å)
主引用文献Structure and substrate specificity determinants of NfnB, a dinitroaniline herbicide-catabolizing nitroreductase from Sphingopyxis sp. strain HMH.
J.Biol.Chem., 297, 2021
7DP0
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BU of 7dp0 by Molmil
Crystal structure of FMN and NADPH-dependent nitroreductase NfnB from sphigopyxis sp. strain HMH
分子名称: FLAVIN MONONUCLEOTIDE, Nitroreductase family protein
著者Kim, S.H, Park, S, Rhee, S.
登録日2020-12-17
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.10004139 Å)
主引用文献Structure and substrate specificity determinants of NfnB, a dinitroaniline herbicide-catabolizing nitroreductase from Sphingopyxis sp. strain HMH.
J.Biol.Chem., 297, 2021
7DP2
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Crystal structure of FMN and NADPH-dependent nitroreductase NfnB mutant Y88F derived from sphigopyxis sp. strain HMH
分子名称: FLAVIN MONONUCLEOTIDE, Nitroreductase family protein
著者Kim, S.H, Park, S, Rhee, S.
登録日2020-12-17
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.40008736 Å)
主引用文献Structure and substrate specificity determinants of NfnB, a dinitroaniline herbicide-catabolizing nitroreductase from Sphingopyxis sp. strain HMH.
J.Biol.Chem., 297, 2021

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