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PDB: 172 件

5TUL
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Crystal structure of tetracycline destructase Tet(55)
分子名称: PHOSPHATE ION, Tetracycline destructase Tet(55)
著者Park, J, Tolia, N.H.
登録日2016-11-06
公開日2017-05-10
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
5TUF
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Crystal structure of tetracycline destructase Tet(50) in complex with anhydrotetracycline
分子名称: 5A,6-ANHYDROTETRACYCLINE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
著者Park, J, Tolia, N.H.
登録日2016-11-06
公開日2017-05-10
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
4NFJ
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Crystal structure of human FPPS in complex with magnesium, JDS05120, and sulfate
分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, SULFATE ION, ...
著者Park, J, De Schutter, J.W, Tsantrizos, Y.S, Berghuis, A.M.
登録日2013-10-31
公開日2014-12-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystallographic and thermodynamic characterization of phenylaminopyridine bisphosphonates binding to human farnesyl pyrophosphate synthase.
PLoS ONE, 12, 2017
4NFI
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Crystal structure of human FPPS in complex with magnesium and JDS05120
分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, [({5-[4-(cyclopropyloxy)phenyl]pyridin-3-yl}amino)methanediyl]bis(phosphonic acid)
著者Park, J, De Schutter, J.W, Tsantrizos, Y.S, Berghuis, A.M.
登録日2013-10-31
公開日2014-12-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystallographic and thermodynamic characterization of phenylaminopyridine bisphosphonates binding to human farnesyl pyrophosphate synthase.
PLoS ONE, 12, 2017
4NFK
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Crystal structure of human FPPS in complex with nickel, JDS05120, and sulfate
分子名称: Farnesyl pyrophosphate synthase, NICKEL (II) ION, SULFATE ION, ...
著者Park, J, De schutter, J.W, Tsantrizos, Y.S, Berghuis, A.M.
登録日2013-10-31
公開日2014-12-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystallographic and thermodynamic characterization of phenylaminopyridine bisphosphonates binding to human farnesyl pyrophosphate synthase.
PLoS ONE, 12, 2017
7XQW
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Formate dehydrogenase (FDH) from Methylobacterium extorquens AM1 (MeFDH1)
分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Park, J, Heo, Y.Y, Roh, S.H, Lee, H.H.
登録日2022-05-09
公開日2023-08-09
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Enzymatic conversion of CO2 in real flue gas to molar-scale formate
To Be Published
4QY6
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Crystal structures of chimeric beta-lactamase cTEM-19m showing different conformations
分子名称: Beta-lactamase TEM, Beta-lactamase PSE-4, CHLORIDE ION, ...
著者Park, J, Gobeil, S, Pelletier, J.N, Berghuis, A.M.
登録日2014-07-23
公開日2015-08-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystal structures of chimeric beta-lactamase cTEM-19m showing different conformations
To be Published
4QXS
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Crystal structure of human FPPS in complex with WC01088
分子名称: (2-{2-[(2S)-3-methylbutan-2-yl]-5-phenyl-1H-indol-3-yl}ethane-1,1-diyl)bis(phosphonic acid), Farnesyl pyrophosphate synthase, GLYCEROL, ...
著者Park, J, Zielinski, M, Weiling, C, Tsantrizos, Y.S, Berghuis, A.M.
登録日2014-07-21
公開日2015-02-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Probing the molecular and structural elements of ligands binding to the active site versus an allosteric pocket of the human farnesyl pyrophosphate synthase.
Bioorg.Med.Chem.Lett., 25, 2015
4QY5
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Crystal structures of chimeric beta-lactamase cTEM-19m showing different conformations
分子名称: Beta-lactamase TEM,Beta-lactamase PSE-4, CHLORIDE ION, MAGNESIUM ION
著者Park, J, Gobeil, S, Pelletier, J.N, Berghuis, A.M.
登録日2014-07-23
公開日2015-08-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Crystal structures of chimeric beta-lactamase cTEM-19m showing different conformations
To be Published
6C57
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Crystal structure of mutant human geranylgeranyl pyrophosphate synthase (Y246D) in complex with bisphosphonate inhibitor FV0109
分子名称: Geranylgeranyl pyrophosphate synthase, {[(2-{3-[(4-fluorobenzene-1-carbonyl)amino]phenyl}thieno[2,3-d]pyrimidin-4-yl)amino]methylene}bis(phosphonic acid)
著者Park, J, Bin, X, Vincent, F, Tsantrizos, Y.S, Berghuis, A.M.
登録日2018-01-15
公開日2018-09-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Unraveling the Prenylation-Cancer Paradox in Multiple Myeloma with Novel Geranylgeranyl Pyrophosphate Synthase (GGPPS) Inhibitors.
J. Med. Chem., 61, 2018
6K17
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BU of 6k17 by Molmil
Crystal structure of EXD2 exonuclease domain
分子名称: Exonuclease 3'-5' domain-containing protein 2, SODIUM ION
著者Park, J, Lee, C.
登録日2019-05-10
公開日2019-05-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
6K1E
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BU of 6k1e by Molmil
Crystal structure of EXD2 exonuclease domain soaked in Mg and GMP
分子名称: Exonuclease 3'-5' domain-containing protein 2, MAGNESIUM ION
著者Park, J, Lee, C.
登録日2019-05-10
公開日2019-05-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
6K1B
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BU of 6k1b by Molmil
Crystal structure of EXD2 exonuclease domain soaked in Mn and dGMP
分子名称: Exonuclease 3'-5' domain-containing protein 2, MANGANESE (II) ION
著者Park, J, Lee, C.
登録日2019-05-10
公開日2019-05-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.605 Å)
主引用文献The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
6N82
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Crystal structure of human FPPS in complex with an allosteric inhibitor YF-02037
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Farnesyl pyrophosphate synthase, ...
著者Park, J, Schilling, M.A, Berghuis, A.M.
登録日2018-11-28
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Chirality-Driven Mode of Binding of alpha-Aminophosphonic Acid-Based Allosteric Inhibitors of the Human Farnesyl Pyrophosphate Synthase (hFPPS).
J.Med.Chem., 62, 2019
6N9H
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BU of 6n9h by Molmil
De novo designed homo-trimeric amantadine-binding protein
分子名称: (3S,5S,7S)-tricyclo[3.3.1.1~3,7~]decan-1-amine, SODIUM ION, amantadine-binding protein
著者Park, J, Baker, D.
登録日2018-12-03
公開日2019-12-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.039 Å)
主引用文献De novo design of a homo-trimeric amantadine-binding protein.
Elife, 8, 2019
6N7Y
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Crystal structure of human FPPS in complex with an allosteric inhibitor MIT-01-102
分子名称: Farnesyl pyrophosphate synthase, GLYCEROL, PHOSPHATE ION, ...
著者Park, J, Berghuis, A.M.
登録日2018-11-28
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Chirality-Driven Mode of Binding of alpha-Aminophosphonic Acid-Based Allosteric Inhibitors of the Human Farnesyl Pyrophosphate Synthase (hFPPS).
J.Med.Chem., 62, 2019
6N83
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BU of 6n83 by Molmil
Crystal structure of human FPPS in complex with an allosteric inhibitor YF-02037
分子名称: CHLORIDE ION, Farnesyl pyrophosphate synthase, PHOSPHATE ION, ...
著者Park, J, Schilling, M.A, Berghuis, A.M.
登録日2018-11-28
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Chirality-Driven Mode of Binding of alpha-Aminophosphonic Acid-Based Allosteric Inhibitors of the Human Farnesyl Pyrophosphate Synthase (hFPPS).
J.Med.Chem., 62, 2019
6N7Z
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BU of 6n7z by Molmil
Crystal structure of human FPPS in complex with an allosteric inhibitor YF-02037
分子名称: CHLORIDE ION, Farnesyl pyrophosphate synthase, GLYCEROL, ...
著者Park, J, Berghuis, A.M.
登録日2018-11-28
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Chirality-Driven Mode of Binding of alpha-Aminophosphonic Acid-Based Allosteric Inhibitors of the Human Farnesyl Pyrophosphate Synthase (hFPPS).
J.Med.Chem., 62, 2019
6OAH
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BU of 6oah by Molmil
Crystal structure of human FPPS in complex with an allosteric inhibitor YF-02-78
分子名称: Farnesyl pyrophosphate synthase, GLYCEROL, PHOSPHATE ION, ...
著者Park, J, Berghuis, A.M.
登録日2019-03-16
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Chirality-Driven Mode of Binding of alpha-Aminophosphonic Acid-Based Allosteric Inhibitors of the Human Farnesyl Pyrophosphate Synthase (hFPPS).
J.Med.Chem., 62, 2019
6OAG
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Crystal structure of human FPPS in complex with an allosteric inhibitor YF-02-82
分子名称: Farnesyl pyrophosphate synthase, PHOSPHATE ION, [(1S)-1-{[6-(3-chloro-4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-phenylethyl]phosphonic acid
著者Park, J, Berghuis, A.M.
登録日2019-03-16
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Chirality-Driven Mode of Binding of alpha-Aminophosphonic Acid-Based Allosteric Inhibitors of the Human Farnesyl Pyrophosphate Synthase (hFPPS).
J.Med.Chem., 62, 2019
7CZ3
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Crystal strcuture of Acyl-CoA thioesterase from Bacillus cereus ATCC 14579
分子名称: Acyl-CoA hydrolase, COENZYME A
著者Park, J, Kim, K.-J.
登録日2020-09-07
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for nucleotide-independent regulation of acyl-CoA thioesterase from Bacillus cereus ATCC 14579.
Int.J.Biol.Macromol., 170, 2020
5XHW
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Crystal structure of HddC from Yersinia pseudotuberculosis
分子名称: Putative 6-deoxy-D-mannoheptose pathway protein, SULFATE ION
著者Park, J, Kim, H, Kim, S, Shin, D.H.
登録日2017-04-24
公開日2018-04-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of d-glycero-alpha-d-manno-heptose-1-phosphate guanylyltransferase from Yersinia pseudotuberculosis.
Biochim. Biophys. Acta, 1866, 2018
5X9Q
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Crystal structure of HldC from Burkholderia pseudomallei
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative cytidylyltransferase
著者Park, J, Kim, H, Kim, S, Lee, D, Shin, D.H.
登録日2017-03-08
公開日2017-12-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of D-glycero-Beta-D-manno-heptose-1-phosphate adenylyltransferase from Burkholderia pseudomallei.
Proteins, 86, 2018
5XF2
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Crystal structure of SeMet-HldC from Burkholderia pseudomallei
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Putative cytidylyltransferase
著者Park, J, Kim, H, Kim, S, Lee, D, Shin, D.H.
登録日2017-04-07
公開日2017-07-19
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Expression and crystallographic studies of D-glycero-beta-D-manno-heptose-1-phosphate adenylyltransferase from Burkholderia pseudomallei
Acta Crystallogr F Struct Biol Commun, 73, 2017
5XHP
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Transferase with ligands
分子名称: ARGININE, MANGANESE (II) ION, Putative cytoplasmic protein, ...
著者Park, J, Yoo, Y, Kim, Y.H, Cho, H.S.
登録日2017-04-22
公開日2018-05-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of L-arginine and UDP bounded glycosyltransfease
To Be Published

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件を2024-05-15に公開中

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