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PDB: 408 results

6LTZ
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BU of 6ltz by Molmil
Induced DNA bending by unique dimerization of HigA antitoxin
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Park, J.Y, Lee, B.J.
Deposit date:2020-01-23
Release date:2020-07-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.973 Å)
Cite:Induced DNA bending by unique dimerization of HigA antitoxin.
Iucrj, 7, 2020
5JEB
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BU of 5jeb by Molmil
Crystal structure of EGFR tyrosine kinase domain with novel inhibitor of active state of HER2
Descriptor: 3-(furan-2-yl)-N-[5-(furan-2-yl)-2-methoxyphenyl]-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Epidermal growth factor receptor, SULFATE ION
Authors:Park, J.H, Lemmon, M.A.
Deposit date:2016-04-18
Release date:2016-09-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.298 Å)
Cite:Overcoming resistance to HER2 inhibitors through state-specific kinase binding.
Nat.Chem.Biol., 12, 2016
5JV0
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BU of 5jv0 by Molmil
Crystal structure of human FPPS in complex with an allosteric inhibitor CL-08-038
Descriptor: Farnesyl pyrophosphate synthase, SULFATE ION, [(1R)-2-(3-fluorophenyl)-1-{[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}ethyl]phosphonic acid
Authors:Park, J, Leung, C.Y, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2016-05-10
Release date:2017-03-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Pharmacophore Mapping of Thienopyrimidine-Based Monophosphonate (ThP-MP) Inhibitors of the Human Farnesyl Pyrophosphate Synthase.
J. Med. Chem., 60, 2017
5JV1
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BU of 5jv1 by Molmil
Crystal structure of human FPPS in complex with an allosteric inhibitor CL-08-066
Descriptor: Farnesyl pyrophosphate synthase, SULFATE ION, [(1R)-1-{[6-(3-chloro-4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-(3-fluorophenyl)ethyl]phosphonic acid
Authors:Park, J, Leung, C.Y, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2016-05-10
Release date:2017-03-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Pharmacophore Mapping of Thienopyrimidine-Based Monophosphonate (ThP-MP) Inhibitors of the Human Farnesyl Pyrophosphate Synthase.
J. Med. Chem., 60, 2017
6OAH
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BU of 6oah by Molmil
Crystal structure of human FPPS in complex with an allosteric inhibitor YF-02-78
Descriptor: Farnesyl pyrophosphate synthase, GLYCEROL, PHOSPHATE ION, ...
Authors:Park, J, Berghuis, A.M.
Deposit date:2019-03-16
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Chirality-Driven Mode of Binding of alpha-Aminophosphonic Acid-Based Allosteric Inhibitors of the Human Farnesyl Pyrophosphate Synthase (hFPPS).
J.Med.Chem., 62, 2019
6OAG
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Crystal structure of human FPPS in complex with an allosteric inhibitor YF-02-82
Descriptor: Farnesyl pyrophosphate synthase, PHOSPHATE ION, [(1S)-1-{[6-(3-chloro-4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-phenylethyl]phosphonic acid
Authors:Park, J, Berghuis, A.M.
Deposit date:2019-03-16
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Chirality-Driven Mode of Binding of alpha-Aminophosphonic Acid-Based Allosteric Inhibitors of the Human Farnesyl Pyrophosphate Synthase (hFPPS).
J.Med.Chem., 62, 2019
4DEM
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BU of 4dem by Molmil
Crystal structure of human FPPS in complex with YS_04_70
Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, [({4-[4-(propan-2-yloxy)phenyl]pyridin-2-yl}amino)methanediyl]bis(phosphonic acid)
Authors:Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2012-01-20
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Design and Synthesis of Active Site Inhibitors of the Human Farnesyl Pyrophosphate Synthase: Apoptosis and Inhibition of ERK Phosphorylation in Multiple Myeloma Cells.
J.Med.Chem., 55, 2012
7SVU
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BU of 7svu by Molmil
TnsBctd-TnsC-TniQ complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (28-MER), DNA (29-MER), ...
Authors:Park, J, Tsai, A.W.T, Kellogg, E.H.
Deposit date:2021-11-19
Release date:2022-11-23
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of the holo CRISPR RNA-guided transposon integration complex
Nature, 613, 2023
5TUK
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BU of 5tuk by Molmil
Crystal structure of tetracycline destructase Tet(51)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Tetracycline destructase Tet(51)
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-06
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
5TUF
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BU of 5tuf by Molmil
Crystal structure of tetracycline destructase Tet(50) in complex with anhydrotetracycline
Descriptor: 5A,6-ANHYDROTETRACYCLINE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-06
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
6JCG
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BU of 6jcg by Molmil
Room temperature structure of HIV-1 Integrase catalytic core domain by serial femtosecond crystallography.
Descriptor: CACODYLATE ION, Integrase
Authors:Park, J.H, Shi, Y, Han, J, Li, X, Kim, T.H, Yun, J.H.
Deposit date:2019-01-28
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Non-Cryogenic Structure and Dynamics of HIV-1 Integrase Catalytic Core Domain by X-ray Free-Electron Lasers.
Int J Mol Sci, 20, 2019
6JCF
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BU of 6jcf by Molmil
Cryogenic structure of HIV-1 Integrase catalytic core domain by synchrotron
Descriptor: CACODYLATE ION, Integrase
Authors:Park, J.H, Han, J, Kim, T.H, Yun, J.H, Lee, W.
Deposit date:2019-01-28
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.153 Å)
Cite:Non-Cryogenic Structure and Dynamics of HIV-1 Integrase Catalytic Core Domain by X-ray Free-Electron Lasers.
Int J Mol Sci, 20, 2019
5TUI
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BU of 5tui by Molmil
Crystal structure of tetracycline destructase Tet(50) in complex with chlortetracycline
Descriptor: 7-CHLOROTETRACYCLINE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-06
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
5TUE
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BU of 5tue by Molmil
Crystal structure of tetracycline destructase Tet(50)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, Tetracycline destructase Tet(50)
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-05
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
6AHG
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BU of 6ahg by Molmil
Trimeric structure of concanavalin A from Canavalia ensiformis
Descriptor: CADMIUM ION, CALCIUM ION, Concanavalin-A,Concanavalin-A
Authors:Park, J.H, Kim, D.S, Park, Y.R, Lee, S.J.
Deposit date:2018-08-18
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Cadmium-substituted concanavalin A and its trimeric complexation
J. Microbiol. Biotechnol., 28(12), 2018
5TUL
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BU of 5tul by Molmil
Crystal structure of tetracycline destructase Tet(55)
Descriptor: PHOSPHATE ION, Tetracycline destructase Tet(55)
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-06
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
5TUM
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BU of 5tum by Molmil
Crystal structure of tetracycline destructase Tet(56)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, tetracycline destructase Tet(56)
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-06
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.299 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
6IQ6
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BU of 6iq6 by Molmil
Crystal structure of GAPDH
Descriptor: (2Z)-4-methoxy-4-oxobut-2-enoic acid, Glyceraldehyde-3-phosphate dehydrogenase
Authors:Park, J.B, Park, H.Y.
Deposit date:2018-11-06
Release date:2019-08-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural Study of Monomethyl Fumarate-Bound Human GAPDH.
Mol.Cells, 42, 2019
8UDK
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BU of 8udk by Molmil
Human Mitochondrial DNA Polymerase gamma R853A Ternary Complex
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (24-MER), DNA (28-MER), ...
Authors:Park, J, Herrmann, G.K, Yin, Y.W.
Deposit date:2023-09-28
Release date:2024-06-05
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:An interaction network in the polymerase active site is a prerequisite for Watson-Crick base pairing in Pol gamma.
Sci Adv, 10, 2024
8UDL
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BU of 8udl by Molmil
Human Mitochondrial DNA Polymerase Gamma Binary Complex
Descriptor: DNA (5'-D(P*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*TP*AP*C)-3'), DNA (5'-D(P*AP*GP*GP*TP*AP*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*T)-3'), DNA polymerase subunit gamma-1, ...
Authors:Park, J, Yin, Y.W.
Deposit date:2023-09-28
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (2.37 Å)
Cite:An interaction network in the polymerase active site is a prerequisite for Watson-Crick base pairing in Pol gamma.
Sci Adv, 10, 2024
4GO6
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BU of 4go6 by Molmil
Crystal structure of HCF-1 self-association sequence 1
Descriptor: HCF C-terminal chain 1, HCF N-terminal chain 1, SULFATE ION
Authors:Park, J, Lammers, F, Herr, W, Song, J.
Deposit date:2012-08-18
Release date:2012-10-17
Last modified:2013-07-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:HCF-1 self-association via an interdigitated Fn3 structure facilitates transcriptional regulatory complex formation
Proc.Natl.Acad.Sci.USA, 109, 2012
4XQR
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BU of 4xqr by Molmil
Crystal structure of unliganded human FPPS at 2.15 angstrom resolution
Descriptor: Farnesyl pyrophosphate synthase, PHOSPHATE ION
Authors:Park, J, Berghuis, A.M.
Deposit date:2015-01-20
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of unliganded human FPPS at 2.15 angstrom resolution
To Be Published
5JA0
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BU of 5ja0 by Molmil
Crystal structure of human FPPS with allosterically bound FPP
Descriptor: FARNESYL DIPHOSPHATE, Farnesyl pyrophosphate synthase, PHOSPHATE ION
Authors:Park, J, Zielinski, M, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2016-04-11
Release date:2017-01-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human farnesyl pyrophosphate synthase is allosterically inhibited by its own product.
Nat Commun, 8, 2017
4XQT
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BU of 4xqt by Molmil
Crystal structure of human FPPS in complex with three magnesium ions
Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, SULFATE ION
Authors:Park, J, Berghuis, A.M.
Deposit date:2015-01-20
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human FPPS in complex with three magnesium ions
To Be Published
4XQS
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Crystal structure of human FPPS in complex with one magnesium ion
Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, SULFATE ION
Authors:Park, J, Berghuis, A.M.
Deposit date:2015-01-20
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human FPPS in complex with one magnesium ion
To Be Published

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