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PDB: 29 results

1T2K
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BU of 1t2k by Molmil
Structure Of The DNA Binding Domains Of IRF3, ATF-2 and Jun Bound To DNA
Descriptor: 31-MER, Cyclic-AMP-dependent transcription factor ATF-2, Interferon regulatory factor 3, ...
Authors:Panne, D, Maniatis, T, Harrison, S.C.
Deposit date:2004-04-21
Release date:2004-11-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of ATF-2/c-Jun and IRF-3 bound to the interferon-beta enhancer.
Embo J., 23, 2004
2O6G
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BU of 2o6g by Molmil
Crystal structure of IRF-3 bound to the interferon-b enhancer
Descriptor: Interferon regulatory factor 3, interferon-b enhancer
Authors:Panne, D.
Deposit date:2006-12-07
Release date:2007-07-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:An Atomic Model of the Interferon-beta Enhanceosome.
Cell(Cambridge,Mass.), 129, 2007
2O61
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BU of 2o61 by Molmil
Crystal Structure of NFkB, IRF7, IRF3 bound to the interferon-b enhancer
Descriptor: 34-MER, 36-MER, Nuclear factor NF-kappa-B p105 subunit, ...
Authors:Panne, D.
Deposit date:2006-12-06
Release date:2007-07-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An Atomic Model of the Interferon-beta Enhanceosome.
Cell(Cambridge,Mass.), 129, 2007
6RSR
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BU of 6rsr by Molmil
TBK1 in complex with compound 2
Descriptor: Serine/threonine-protein kinase TBK1, ~{N}-(cyclopropen-1-ylmethyl)-2-[[4-[[4-[3,3,3-tris(fluoranyl)propanoyl]piperazin-1-yl]methyl]pyridin-2-yl]amino]-1~{H}-benzimidazole-5-carboxamide
Authors:Panne, D, Hillig, R.C, Rengachari, S.
Deposit date:2019-05-22
Release date:2020-01-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Discovery of BAY-985, a Highly Selective TBK1/IKK epsilon Inhibitor.
J.Med.Chem., 63, 2020
6RST
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BU of 6rst by Molmil
TBK1 in complex with inhibitor compound 24
Descriptor: 1-[4-[(1~{R})-1-[2-[[5-[1-(cyclopropylmethyl)pyrazol-4-yl]-1~{H}-benzimidazol-2-yl]amino]pyridin-4-yl]ethyl]piperazin-1-yl]-3,3,3-tris(fluoranyl)propan-1-one, Serine/threonine-protein kinase TBK1
Authors:Panne, D, Hillig, R.C, Rengachari, S.
Deposit date:2019-05-22
Release date:2020-01-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Discovery of BAY-985, a Highly Selective TBK1/IKK epsilon Inhibitor.
J.Med.Chem., 63, 2020
6QPW
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BU of 6qpw by Molmil
Structural basis of cohesin ring opening
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Sister chromatid cohesion protein 1, ...
Authors:Panne, D, Muir, K.W, Li, Y, Weis, F.
Deposit date:2019-02-15
Release date:2020-02-05
Last modified:2020-03-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The structure of the cohesin ATPase elucidates the mechanism of SMC-kleisin ring opening.
Nat.Struct.Mol.Biol., 27, 2020
6RSU
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BU of 6rsu by Molmil
TBK1 in complex with Inhibitor compound 35
Descriptor: 3,3,3-tris(fluoranyl)-1-[4-[(1~{R})-1-[2-[[(2~{S})-5-(5-propan-2-yloxypyrimidin-4-yl)-2,3-dihydro-1~{H}-benzimidazol-2-yl]amino]pyridin-4-yl]ethyl]piperazin-1-yl]propan-1-one, Serine/threonine-protein kinase TBK1
Authors:Panne, D, Hillig, R.C, Rengachari, S.
Deposit date:2019-05-22
Release date:2020-04-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Discovery of BAY-985, a Highly Selective TBK1/IKK epsilon Inhibitor.
J.Med.Chem., 63, 2020
6GYT
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BU of 6gyt by Molmil
Transcription factor dimerization activates the p300 acetyltransferase
Descriptor: Histone H4, Histone acetyltransferase p300, ZINC ION
Authors:Panne, D, Ortega, E.
Deposit date:2018-07-01
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Transcription factor dimerization activates the p300 acetyltransferase.
Nature, 562, 2018
6GYR
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BU of 6gyr by Molmil
Transcription factor dimerization activates the p300 acetyltransferase
Descriptor: Histone acetyltransferase p300, ZINC ION, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]methyl (3R,20R)-20-carbamoyl-3-hydroxy-2,2-dimethyl-4,8,14,22-tetraoxo-12-thia-5,9,15,21-tetraazatricos-1-yl dihydrogen diphosphate
Authors:Panne, D, Ortega, E.
Deposit date:2018-07-01
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Transcription factor dimerization activates the p300 acetyltransferase.
Nature, 562, 2018
4IWQ
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BU of 4iwq by Molmil
Crystal structure and mechanism of activation of TBK1
Descriptor: N-{3-[(5-cyclopropyl-2-{[3-(morpholin-4-ylmethyl)phenyl]amino}pyrimidin-4-yl)amino]propyl}cyclobutanecarboxamide, Serine/threonine-protein kinase TBK1
Authors:Panne, D, Larabi, A.
Deposit date:2013-01-24
Release date:2013-03-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure and mechanism of activation of TANK-binding kinase 1.
Cell Rep, 3, 2013
4IWO
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BU of 4iwo by Molmil
Crystal structure and mechanism of activation of TBK1
Descriptor: N-{3-[(5-cyclopropyl-2-{[3-(2-oxopyrrolidin-1-yl)phenyl]amino}pyrimidin-4-yl)amino]propyl}cyclobutanecarboxamide, Serine/threonine-protein kinase TBK1
Authors:Panne, D, Larabi, A.
Deposit date:2013-01-24
Release date:2013-03-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structure and mechanism of activation of TANK-binding kinase 1.
Cell Rep, 3, 2013
4IWP
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BU of 4iwp by Molmil
Crystal structure and mechanism of activation of TBK1
Descriptor: N-(3-{[5-iodo-4-({3-[(thiophen-2-ylcarbonyl)amino]propyl}amino)pyrimidin-2-yl]amino}phenyl)pyrrolidine-1-carboxamide, Serine/threonine-protein kinase TBK1
Authors:Panne, D, Larabi, A.
Deposit date:2013-01-24
Release date:2013-03-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.065 Å)
Cite:Crystal structure and mechanism of activation of TANK-binding kinase 1.
Cell Rep, 3, 2013
7ZJS
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BU of 7zjs by Molmil
Structural basis of centromeric cohesion protection by SGO1
Descriptor: Cohesin subunit SA-2, Double-strand-break repair protein rad21 homolog, Shugoshin 1
Authors:Patel, A, Panne, D.
Deposit date:2022-04-11
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Structural basis of centromeric cohesion protection.
Nat.Struct.Mol.Biol., 30, 2023
5LKX
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BU of 5lkx by Molmil
Crystal structure of the p300 acetyltransferase catalytic core with propionyl-coenzyme A.
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, Histone acetyltransferase p300,Histone acetyltransferase p300, ...
Authors:Kaczmarska, Z, Ortega, E, Marquez, J.A, Panne, D.
Deposit date:2016-07-25
Release date:2016-11-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structure of p300 in complex with acyl-CoA variants.
Nat. Chem. Biol., 13, 2017
6H8Q
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BU of 6h8q by Molmil
Structural basis for Scc3-dependent cohesin recruitment to chromatin
Descriptor: Cohesin subunit SCC3, DNA (5'-D(P*CP*TP*TP*TP*CP*GP*TP*TP*TP*CP*CP*TP*TP*GP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*CP*AP*AP*GP*GP*AP*AP*AP*CP*GP*AP*AP*AP*G)-3'), ...
Authors:Li, Y, Muir, K, Panne, D.
Deposit date:2018-08-03
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.631 Å)
Cite:Structural basis for Scc3-dependent cohesin recruitment to chromatin.
Elife, 7, 2018
3FDQ
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BU of 3fdq by Molmil
Recognition of AT-rich DNA binding sites by the MogR Repressor
Descriptor: 5'-D(*AP*TP*TP*TP*TP*TP*TP*AP*AP*AP*AP*AP*AP*AP*T)-3', 5'-D(*TP*AP*TP*TP*TP*TP*TP*TP*TP*AP*AP*AP*AP*AP*A)-3', Motility gene repressor mogR
Authors:Shen, A, Higgins, D.E, Panne, D.
Deposit date:2008-11-26
Release date:2009-06-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Recognition of AT-Rich DNA Binding Sites by the MogR Repressor.
Structure, 17, 2009
4BHW
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BU of 4bhw by Molmil
Structural basis for autoinhibition of the acetyltransferase activity of p300
Descriptor: HISTONE ACETYLTRANSFERASE P300, ZINC ION, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]methyl (3R,20R)-20-carbamoyl-3-hydroxy-2,2-dimethyl-4,8,14,22-tetraoxo-12-thia-5,9,15,21-tetraazatricos-1-yl dihydrogen diphosphate
Authors:Delvecchio, M, Gaucher, J, Aguilar-Gurrieri, C, Ortega, E, Panne, D.
Deposit date:2013-04-08
Release date:2013-08-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:Structure of the P300 Catalytic Core and Implications for Chromatin Targeting and Hat Regulation
Nat.Struct.Mol.Biol., 20, 2013
6QPQ
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BU of 6qpq by Molmil
The structure of the cohesin head module elucidates the mechanism of ring opening
Descriptor: Sister chromatid cohesion protein 1, Structural maintenance of chromosomes protein,Structural maintenance of chromosomes protein
Authors:Li, Y, Muir, K.W, Panne, D.
Deposit date:2019-02-14
Release date:2020-02-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of the cohesin ATPase elucidates the mechanism of SMC-kleisin ring opening.
Nat.Struct.Mol.Biol., 27, 2020
6QNX
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BU of 6qnx by Molmil
Structure of the SA2/SCC1/CTCF complex
Descriptor: 64-kDa C-terminal product, Cohesin subunit SA-2, Transcriptional repressor CTCF
Authors:Li, Y, Muir, K.W, Panne, D.
Deposit date:2019-02-12
Release date:2020-01-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structural basis for cohesin-CTCF-anchored loops.
Nature, 578, 2020
5FRR
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BU of 5frr by Molmil
Structure of the Pds5-Scc1 complex and implications for cohesin function
Descriptor: SISTER CHROMATID COHESION PROTEIN PDS5
Authors:Muir, K.W, Kschonsak, M, Li, Y, Metz, J, Haering, C.H, Panne, D.
Deposit date:2015-12-22
Release date:2016-03-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (5.8 Å)
Cite:Structure of the Pds5-Scc1 Complex and Implications for Cohesin Function
Cell Rep., 14, 2016
5FRS
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BU of 5frs by Molmil
Structure of the Pds5-Scc1 complex and implications for cohesin function
Descriptor: SISTER CHROMATID COHESION PROTEIN 1, SISTER CHROMATID COHESION PROTEIN PDS5
Authors:Muir, K.W, Kschonsak, M, Li, Y, Metz, J, Haering, C.H, Panne, D.
Deposit date:2015-12-22
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (4.073 Å)
Cite:Structure of the Pds5-Scc1 Complex and Implications for Cohesin Function
Cell Rep., 14, 2016
5FRP
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BU of 5frp by Molmil
Structure of the Pds5-Scc1 complex and implications for cohesin function
Descriptor: MCD1-LIKE PROTEIN, SISTER CHROMATID COHESION PROTEIN PDS5
Authors:Muir, K.W, Kschonsak, M, Li, Y, Metz, J, Haering, C.H, Panne, D.
Deposit date:2015-12-21
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.895 Å)
Cite:Structure of the Pds5-Scc1 Complex and Implications for Cohesin Function
Cell Rep., 14, 2016
5G2E
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BU of 5g2e by Molmil
Structure of the Nap1 H2A H2B complex
Descriptor: HISTONE H2A TYPE 1, HISTONE H2B 1.1, NUCLEOSOME ASSEMBLY PROTEIN
Authors:AguilarGurrieri, C, Larabi, A, Vinayachandran, V, Patel, N.A, Yen, K, Reja, R, Ebong, I.O, Schoehn, G, Robinson, C.V, Pugh, B.F, Panne, D.
Deposit date:2016-04-07
Release date:2016-08-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (6.7 Å)
Cite:Structural Evidence for Nap1-Dependent H2A-H2B Deposition and Nucleosome Assembly.
Embo J., 35, 2016
4IW0
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BU of 4iw0 by Molmil
Crystal structure and mechanism of activation of TBK1
Descriptor: N-(3-{[5-iodo-4-({3-[(thiophen-2-ylcarbonyl)amino]propyl}amino)pyrimidin-2-yl]amino}phenyl)pyrrolidine-1-carboxamide, Serine/threonine-protein kinase TBK1
Authors:Larabi, A, Devos, J.M, Ng, S.-L, Nanao, M.H, Round, A, Maniatis, T, Panne, D.
Deposit date:2013-01-23
Release date:2013-03-13
Last modified:2013-05-22
Method:X-RAY DIFFRACTION (4 Å)
Cite:Crystal structure and mechanism of activation of TANK-binding kinase 1.
Cell Rep, 3, 2013
5LKU
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BU of 5lku by Molmil
Crystal structure of the p300 acetyltransferase catalytic core with coenzyme A.
Descriptor: COENZYME A, Histone acetyltransferase p300,Histone acetyltransferase p300, ZINC ION
Authors:Kaczmarska, Z, Ortega, E, Marquez, J.A, Panne, D.
Deposit date:2016-07-25
Release date:2016-11-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of p300 in complex with acyl-CoA variants.
Nat. Chem. Biol., 13, 2017

 

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