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PDB: 98 results

7WFD
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BU of 7wfd by Molmil
Left PSI in the cyclic electron transport supercomplex NDH-PSI from Arabidopsis
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Pan, X, Li, M.
Deposit date:2021-12-26
Release date:2022-03-16
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Supramolecular assembly of chloroplast NADH dehydrogenase-like complex with photosystem I from Arabidopsis thaliana.
Mol Plant, 15, 2022
4N9L
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crystal structure of beta-lactamse PenP_E166S in complex with meropenem
Descriptor: (2S,3R,4S)-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid, Beta-lactamase
Authors:Pan, X, Wong, W, Zhao, Y.
Deposit date:2013-10-21
Release date:2014-09-10
Last modified:2022-02-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Perturbing the General Base Residue Glu166 in the Active Site of Class A beta-Lactamase Leads to Enhanced Carbapenem Binding and Acylation
Biochemistry, 53, 2014
4N9K
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crystal structure of beta-lactamse PenP_E166S in complex with cephaloridine
Descriptor: 5-METHYL-2-[2-OXO-1-(2-THIOPHEN-2-YL-ACETYLAMINO)-ETHYL]-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, Beta-lactamase
Authors:Pan, X, Wong, W, Zhao, Y.
Deposit date:2013-10-21
Release date:2014-09-10
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Perturbing the General Base Residue Glu166 in the Active Site of Class A beta-Lactamase Leads to Enhanced Carbapenem Binding and Acylation
Biochemistry, 53, 2014
4N92
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Crystal structure of beta-lactamse PenP_E166S
Descriptor: Beta-lactamase
Authors:Pan, X, Wong, W, Zhao, Y.
Deposit date:2013-10-19
Release date:2014-09-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Perturbing the General Base Residue Glu166 in the Active Site of Class A beta-Lactamase Leads to Enhanced Carbapenem Binding and Acylation
Biochemistry, 53, 2014
3JUE
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BU of 3jue by Molmil
Crystal Structure of ArfGAP and ANK repeat domain of ACAP1
Descriptor: ARFGAP with coiled-coil, ANK repeat and PH domain-containing protein 1, SULFATE ION, ...
Authors:Pang, X, Zhang, K, Ma, J, Zhou, Q, Sun, F.
Deposit date:2009-09-15
Release date:2010-09-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanistic insights into regulated cargo binding by ACAP1 protein
J.Biol.Chem., 287, 2012
4NSW
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BU of 4nsw by Molmil
Crystal structure of the BAR-PH domain of ACAP1
Descriptor: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1
Authors:Pang, X, Zhang, K, Ma, J, Zhou, Q, Sun, F.
Deposit date:2013-11-29
Release date:2014-10-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A PH Domain in ACAP1 Possesses Key Features of the BAR Domain in Promoting Membrane Curvature
Dev.Cell, 31, 2014
5X0M
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BU of 5x0m by Molmil
Structure of a eukaryotic voltage-gated sodium channel at near atomic resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Sodium channel protein, ...
Authors:Shen, H, Zhou, Q, Pan, X, Li, Z, Wu, J, Yan, N.
Deposit date:2017-01-21
Release date:2017-03-08
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of a eukaryotic voltage-gated sodium channel at near-atomic resolution.
Science, 355, 2017
7XN4
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BU of 7xn4 by Molmil
Cryo-EM structure of CopC-CaM-caspase-3 with NAD+
Descriptor: Arginine ADP-riboxanase CopC, Calmodulin-1, Caspase-3, ...
Authors:Zhang, K, Peng, T, Tao, X.Y, Tian, M, Li, Y.X, Wang, Z, Ma, S.F, Hu, S.F, Pan, X, Xue, J, Luo, J.W, Wu, Q.L, Fu, Y, Li, S.
Deposit date:2022-04-28
Release date:2022-12-14
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural insights into caspase ADPR deacylization catalyzed by a bacterial effector and host calmodulin.
Mol.Cell, 82, 2022
7XN5
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BU of 7xn5 by Molmil
Cryo-EM structure of CopC-CaM-caspase-3 with ADPR
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Arginine ADP-riboxanase CopC, Calmodulin-1, ...
Authors:Zhang, K, Peng, T, Tao, X.Y, Tian, M, Li, Y.X, Wang, Z, Ma, S.F, Hu, S.F, Pan, X, Xue, J, Luo, J.W, Wu, Q.L, Fu, Y, Li, S.
Deposit date:2022-04-28
Release date:2022-12-14
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Structural insights into caspase ADPR deacylization catalyzed by a bacterial effector and host calmodulin.
Mol.Cell, 82, 2022
7XN6
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Cryo-EM structure of CopC-CaM-caspase-3 with ADPR-deacylization
Descriptor: Arginine ADP-riboxanase CopC, Calmodulin-1, Caspase-3, ...
Authors:Zhang, K, Peng, T, Tao, X.Y, Tian, M, Li, Y.X, Wang, Z, Ma, S.F, Hu, S.F, Pan, X, Xue, J, Luo, J.W, Wu, Q.L, Fu, Y, Li, S.
Deposit date:2022-04-28
Release date:2022-12-14
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structural insights into caspase ADPR deacylization catalyzed by a bacterial effector and host calmodulin.
Mol.Cell, 82, 2022
6PE0
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BU of 6pe0 by Molmil
Msp1 (E214Q)-substrate complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Membrane-spanning ATPase-like protein, ...
Authors:Wang, L, Myasnikov, A, Pan, X, Walter, P.
Deposit date:2019-06-19
Release date:2020-02-12
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of the AAA protein Msp1 reveals mechanism of mislocalized membrane protein extraction.
Elife, 9, 2020
6PDY
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BU of 6pdy by Molmil
Msp1-substrate complex in open conformation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Wang, L, Myasnikov, A, Pan, X, Walter, P.
Deposit date:2019-06-19
Release date:2020-02-12
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the AAA protein Msp1 reveals mechanism of mislocalized membrane protein extraction.
Elife, 9, 2020
6PDW
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BU of 6pdw by Molmil
Msp1-substrate complex in closed conformation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Wang, L, Myasnikov, A, Pan, X, Walter, P.
Deposit date:2019-06-19
Release date:2020-02-12
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the AAA protein Msp1 reveals mechanism of mislocalized membrane protein extraction.
Elife, 9, 2020
4IX3
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BU of 4ix3 by Molmil
Crystal structure of a Stt7 homolog from Micromonas algae
Descriptor: MAGNESIUM ION, MsStt7d protein
Authors:Guo, J, Wei, X, Li, M, Pan, X, Chang, W, Liu, Z.
Deposit date:2013-01-24
Release date:2013-10-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of the catalytic domain of a state transition kinase homolog from Micromonas algae
Protein Cell, 4, 2013
4IX5
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BU of 4ix5 by Molmil
Crystal structure of a Stt7 homolog from Micromonas algae in complex with AMP-PNP
Descriptor: MAGNESIUM ION, MsStt7d protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Guo, J, Wei, X, Li, M, Pan, X, Chang, W, Liu, Z.
Deposit date:2013-01-24
Release date:2013-10-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the catalytic domain of a state transition kinase homolog from Micromonas algae
Protein Cell, 4, 2013
4IX6
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BU of 4ix6 by Molmil
Crystal structure of a Stt7 homolog from Micromonas algae soaked with ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MsStt7d protein
Authors:Guo, J, Wei, X, Li, M, Pan, X, Chang, W, Liu, Z.
Deposit date:2013-01-24
Release date:2013-10-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the catalytic domain of a state transition kinase homolog from Micromonas algae
Protein Cell, 4, 2013
6W90
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BU of 6w90 by Molmil
De novo designed NTF2 fold protein NT-9
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, NTF2 fold protein loop-helix-loop design NT-9
Authors:Thompson, M.C, Pan, X, Liu, L, Fraser, J.S, Kortemme, T.
Deposit date:2020-03-21
Release date:2020-08-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Expanding the space of protein geometries by computational design of de novo fold families.
Science, 369, 2020
3QQ3
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BU of 3qq3 by Molmil
Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides
Descriptor: 9-mer peptide from Neuraminidase, Beta-2-microglobulin, MHC class I antigen
Authors:Zhang, N, Qi, J, Gao, F, Pan, X, Chen, R, Li, Q, Chen, Z, Li, X, Xia, C, Gao, G.F.
Deposit date:2011-02-15
Release date:2011-12-28
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides.
J.Virol., 85, 2011
4IX4
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BU of 4ix4 by Molmil
Crystal structure of a Stt7 homolog from Micromonas algae in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MsStt7d protein
Authors:Guo, J, Wei, X, Li, M, Pan, X, Chang, W, Liu, Z.
Deposit date:2013-01-24
Release date:2013-10-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Structure of the catalytic domain of a state transition kinase homolog from Micromonas algae
Protein Cell, 4, 2013
3QQ4
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BU of 3qq4 by Molmil
Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides
Descriptor: Beta-2-microglobulin, MHC class I antigen, VP35
Authors:Zhang, N, Qi, J, Gao, F, Pan, X, Chen, R, Li, Q, Chen, Z, Li, X, Xia, C, Gao, G.F.
Deposit date:2011-02-15
Release date:2011-12-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides.
J.Virol., 85, 2011
4J1L
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BU of 4j1l by Molmil
Mutant Endotoxin TeNT
Descriptor: Tetanus toxin, ZINC ION
Authors:Guo, J, Pan, X, Zhao, Y, Chen, S.
Deposit date:2013-02-01
Release date:2014-02-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Engineering Clostridia Neurotoxins with elevated catalytic activity
Toxicon, 74, 2013
6LQA
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BU of 6lqa by Molmil
voltage-gated sodium channel Nav1.5 with quinidine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Quinidine, Sodium channel protein type 5 subunit alpha
Authors:Yan, N, Li, Z, Pan, X, Huang, G.
Deposit date:2020-01-13
Release date:2021-03-24
Last modified:2021-05-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural Basis for Pore Blockade of the Human Cardiac Sodium Channel Na v 1.5 by the Antiarrhythmic Drug Quinidine*.
Angew.Chem.Int.Ed.Engl., 60, 2021
1Z07
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BU of 1z07 by Molmil
GppNHp-Bound Rab5c G55Q mutant GTPase
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein Rab-5C
Authors:Eathiraj, S, Pan, X, Ritacco, C, Lambright, D.G.
Deposit date:2005-03-01
Release date:2005-07-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural basis of family-wide Rab GTPase recognition by rabenosyn-5.
Nature, 436, 2005
1YZL
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BU of 1yzl by Molmil
GppNHp-Bound Rab9 GTPase
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein Rab-9A
Authors:Eathiraj, S, Pan, X, Ritacco, C, Lambright, D.G.
Deposit date:2005-02-28
Release date:2005-07-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis of family-wide Rab GTPase recognition by rabenosyn-5.
Nature, 436, 2005
1Z0I
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BU of 1z0i by Molmil
GDP-Bound Rab21 GTPase
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-21
Authors:Eathiraj, S, Pan, X, Ritacco, C, Lambright, D.G.
Deposit date:2005-03-01
Release date:2005-07-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural basis of family-wide Rab GTPase recognition by rabenosyn-5.
Nature, 436, 2005

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