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PDB: 314 件

2ZZ4
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Covalent complex of orotidine monophosphate decarboxylase D75N mutant from M. thermoautotrophicum with 6-cyano-UMP
分子名称: 6-cyanouridine 5'-phosphate, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
3R41
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Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - His280Asn/apo
分子名称: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase
著者Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
登録日2011-03-17
公開日2011-05-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
2ZZ1
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Snapshot of the reaction from 6-CN-UMP to BMP catalyzed by Orotidine Monophosphate Deacarboxylase from M. thermoautotrophicum
分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, 6-cyanouridine 5'-phosphate, GLYCEROL, ...
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
2ZZ2
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Orotidine Monophosphate Decarboxylase K72A mutant from M. thermoautotrophicum complexed with 6-cyano-UMP
分子名称: 6-cyanouridine 5'-phosphate, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
3S9Y
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Crystal Structure of P. falciparum orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP in space group P21, produced from 5-fluoro-6-azido-UMP
分子名称: 6-amino-5-fluorouridine 5'-(dihydrogen phosphate), DI(HYDROXYETHYL)ETHER, HEXAETHYLENE GLYCOL, ...
著者Liu, Y, Kotra, L.P, Pai, E.F.
登録日2011-06-02
公開日2012-04-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-activity relationships of orotidine-5'-monophosphate decarboxylase inhibitors as anticancer agents.
J.Med.Chem., 52, 2009
3RHU
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Epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins
分子名称: SC_1wnu
著者Azoitei, M.L, Ban, Y.A, Julien, J.P, Bryson, S, Schroeter, A, Kalyuzhniy, O, Porter, J.R, Adachi, Y, Baker, D, Szabo, E, Pai, E.F, Schief, W.R.
登録日2011-04-12
公開日2011-11-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Computational design of high-affinity epitope scaffolds by backbone grafting of a linear epitope.
J.Mol.Biol., 415, 2012
3R40
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Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/apo
分子名称: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase
著者Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
登録日2011-03-16
公開日2011-05-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3R3X
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Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/Bromoacetate
分子名称: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase, ...
著者Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
登録日2011-03-16
公開日2011-05-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3AN1
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Crystal structure of rat D428A mutant, urate bound form
分子名称: BICARBONATE ION, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Okamoto, K, Kawaguchi, Y, Eger, B.T, Pai, E.F, Nishino, T.
登録日2010-08-27
公開日2010-12-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal Structures of Urate Bound Form of Xanthine Oxidoreductase: Substrate Orientation and Structure of the Key Reaction Intermediate
J.Am.Chem.Soc., 132, 2010
3AMZ
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Bovine Xanthine Oxidoreductase urate bound form
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, BICARBONATE ION, CALCIUM ION, ...
著者Okamoto, K, Eger, B.T, Pai, E.F, Nishino, T.
登録日2010-08-27
公開日2010-12-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of Urate Bound Form of Xanthine Oxidoreductase: Substrate Orientation and Structure of the Key Reaction Intermediate
J.Am.Chem.Soc., 132, 2010
3R3V
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BU of 3r3v by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/Fluoroacetate
分子名称: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase, ...
著者Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
登録日2011-03-16
公開日2011-05-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3RFN
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BU of 3rfn by Molmil
Epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins
分子名称: BB_1wnu_001, ZINC ION
著者Azoitei, M.L, Ban, Y.A, Julien, J.P, Bryson, S, Schroeter, A, Kalyuzhniy, O, Porter, J.R, Adachi, Y, Baker, D, Szabo, E, Pai, E.F, Schief, W.R.
登録日2011-04-06
公開日2011-11-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Computational design of high-affinity epitope scaffolds by backbone grafting of a linear epitope.
J.Mol.Biol., 415, 2012
2ZZ6
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BU of 2zz6 by Molmil
Covalent complex of orotidine monophosphate decarboxylase from M. thermoautotrophicum with 6-azido-UMP
分子名称: 6-azidouridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
3SZE
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BU of 3sze by Molmil
Crystal structure of the passenger domain of the E. coli autotransporter EspP
分子名称: Serine protease espP
著者Khan, S, Mian, H.S, Sandercock, L.E, Battaile, K.P, Lam, R, Chirgadze, N.Y, Pai, E.F.
登録日2011-07-18
公開日2011-10-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of the Passenger Domain of the Escherichia coli Autotransporter EspP.
J.Mol.Biol., 413, 2011
3R3Z
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Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - WT/Glycolate
分子名称: Fluoroacetate dehalogenase, GLYCOLIC ACID, NICKEL (II) ION
著者Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
登録日2011-03-16
公開日2011-05-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3BGJ
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BU of 3bgj by Molmil
Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Covalently Modified by 6-iodo-UMP
分子名称: GLYCEROL, URIDINE-5'-MONOPHOSPHATE, Uridine 5'-monophosphate synthase
著者Liu, Y, Tang, H.L, Bello, A.M, Devalla, S, Kotra, L.P, Pai, E.F.
登録日2007-11-26
公開日2008-11-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Covalently Modified by 6-iodo-UMP
To be Published
3R3W
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Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/Chloroacetate
分子名称: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase, ...
著者Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
登録日2011-03-16
公開日2011-05-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3BPW
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BU of 3bpw by Molmil
Crystal Structure of P. falciparum Orotidine 5'-monophosphate Decarboxylase Complexed with XMP
分子名称: DI(HYDROXYETHYL)ETHER, Orotidine 5'-phosphate decarboxylase, PHOSPHATE ION, ...
著者Liu, Y, Lau, W, Pai, E.F.
登録日2007-12-19
公開日2008-11-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of P. falciparum Orotidine 5'-monophosphate Decarboxylase Complexed with XMP
To be Published
1KM0
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BU of 1km0 by Molmil
Crystal structure of orotidine monophosphate decarboxylase mutant D70N complexed with 6-azaUMP
分子名称: 6-AZA URIDINE 5'-MONOPHOSPHATE, OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
著者Wu, N, Gillon, W, Pai, E.F.
登録日2001-12-13
公開日2002-06-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mapping the active site-ligand interactions of orotidine 5'-monophosphate decarboxylase by crystallography.
Biochemistry, 41, 2002
1KM1
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Orotidine monophosphate decarboxylase mutant S127A crystal structure
分子名称: 6-AZA URIDINE 5'-MONOPHOSPHATE, OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
著者Wu, N, Gillon, W, Pai, E.F.
登録日2001-12-13
公開日2002-06-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Mapping the active site-ligand interactions of orotidine 5'-monophosphate decarboxylase by crystallography.
Biochemistry, 41, 2002
1KLZ
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BU of 1klz by Molmil
Crystal structure of orotidine monophosphate decarboxylase mutant D70A complexed with UMP
分子名称: CHLORIDE ION, OROTIDINE 5'-PHOSPHATE DECARBOXYLASE, URIDINE-5'-MONOPHOSPHATE
著者Wu, N, Gillon, W, Pai, E.F.
登録日2001-12-13
公開日2002-06-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mapping the active site-ligand interactions of orotidine 5'-monophosphate decarboxylase by crystallography.
Biochemistry, 41, 2002
1V97
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Crystal Structure of Bovine Milk Xanthine Dehydrogenase FYX-051 bound form
分子名称: 4-(5-PYRIDIN-4-YL-1H-1,2,4-TRIAZOL-3-YL)PYRIDINE-2-CARBONITRILE, ACETIC ACID, CALCIUM ION, ...
著者Okamoto, K, Matsumoto, K, Hille, R, Eger, B.T, Pai, E.F, Nishino, T.
登録日2004-01-21
公開日2004-06-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献The crystal structure of xanthine oxidoreductase during catalysis: Implications for reaction mechanism and enzyme inhibition.
Proc.Natl.Acad.Sci.USA, 101, 2004
2F5A
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BU of 2f5a by Molmil
CRYSTAL STRUCTURE OF FAB' FROM THE HIV-1 NEUTRALIZING ANTIBODY 2F5
分子名称: PROTEIN (ANTIBODY 2F5 (HEAVY CHAIN)), PROTEIN (ANTIBODY 2F5 (LIGHT CHAIN))
著者Bryson, S, Julien, J.P, Hynes, R.C, Pai, E.F.
登録日1999-04-08
公開日2003-07-15
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystallographic definition of the epitope promiscuity of the broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2F5: vaccine design implications.
J.Virol., 83, 2009
1VDV
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BU of 1vdv by Molmil
Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
分子名称: 1-[3-CYANO-4-(NEOPENTYLOXY)PHENYL]-1H-PYRAZOLE-4-CARBOXYLIC ACID, ACETIC ACID, CALCIUM ION, ...
著者Fukunari, A, Okamoto, K, Nishino, T, Eger, B.T, Pai, E.F, Kamezawa, M, Yamada, I, Kato, N.
登録日2004-03-25
公開日2004-12-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Y-700 [1-[3-Cyano-4-(2,2-dimethylpropoxy)phenyl]-1H-pyrazole-4-carboxylic acid]: a potent xanthine oxidoreductase inhibitor with hepatic excretion
J.Pharmacol.Exp.Ther., 311, 2004
4PAU
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BU of 4pau by Molmil
Hypothetical protein SA1058 from S. aureus.
分子名称: CHLORIDE ION, Nitrogen regulatory protein A
著者Battaile, K.P, Wu-Brown, J, Romanov, V, Jones, K, Lam, R, Pai, E.F, Chirgadze, N.Y.
登録日2014-04-10
公開日2015-05-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Hypothetical protein SA1058 from S. aureus.
To Be Published

221051

件を2024-06-12に公開中

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