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PDB: 46130 results

1K4Q
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Human Glutathione Reductase Inactivated by Peroxynitrite
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Glutathione Reductase
Authors:Savvides, S.N, Scheiwein, M, Boehme, C.C, Arteel, G.E, Karplus, P.A, Becker, K, Schirmer, R.H.
Deposit date:2001-10-08
Release date:2002-01-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the antioxidant enzyme glutathione reductase inactivated by peroxynitrite.
J.Biol.Chem., 277, 2002
7O9O
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Crystal structure of the Awp3b (adhesin-like wall protein 3b) A-domain from Candida glabrata
Descriptor: AWP3b, CHLORIDE ION, SODIUM ION
Authors:Reithofer, V, de Groot, P, Essen, L.-O.
Deposit date:2021-04-16
Release date:2021-12-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A novel class of Candida glabrata cell wall proteins with beta-helix fold mediates adhesion in clinical isolates.
Plos Pathog., 17, 2021
8XOL
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Cryo-EM structure of human ABCC4 with ANP bound in NBD1
Descriptor: 2-[2-[(1~{S},2~{S},4~{S},5'~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{R},16~{S})-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-ene-6,2'-oxane]-16-yl]oxyethyl]propane-1,3-diol, ATP-binding cassette sub-family C member 4, MAGNESIUM ION, ...
Authors:Zhang, P.F, Liu, Z.
Deposit date:2024-01-01
Release date:2024-07-17
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:The ATP-bound inward-open conformation of ABCC4 reveals asymmetric ATP binding for substrate transport.
Febs Lett., 598, 2024
1K8D
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BU of 1k8d by Molmil
crystal structure of the non-classical MHC class Ib Qa-2 complexed with a self peptide
Descriptor: 60S RIBOSOMAL PROTEIN, BETA-2-MICROGLOBULIN, QA-2 antigen
Authors:He, X, Tabaczewski, P, Ho, J, Stroynowski, I, Garcia, K.C.
Deposit date:2001-10-23
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Promiscuous antigen presentation by the nonclassical MHC Ib Qa-2 is enabled by a shallow, hydrophobic groove and self-stabilized peptide conformation.
Structure, 9, 2001
3NF5
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Crystal structure of the C-terminal domain of nuclear pore complex component NUP116 from Candida glabrata
Descriptor: GLYCEROL, Nucleoporin NUP116
Authors:Sampathkumar, P, Manglicmot, D, Bain, K, Gilmore, J, Gheyi, T, Rout, M, Sali, A, Atwell, S, Thompson, D.A, Emtage, J.S, Wasserman, S, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-06-09
Release date:2010-08-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Atomic structure of the nuclear pore complex targeting domain of a Nup116 homologue from the yeast, Candida glabrata.
Proteins, 80, 2012
4LW6
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Crystal structure of catalytic domain of Drosophila beta1,4galactosyltransferase 7 complex with xylobiose
Descriptor: 2-AMINO-1,3-PROPANEDIOL, Beta-4-galactosyltransferase 7, MANGANESE (II) ION, ...
Authors:Qasba, P.K, Ramakrishnan, B.
Deposit date:2013-07-26
Release date:2013-09-25
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of beta-1,4-Galactosyltransferase 7 Enzyme Reveal Conformational Changes and Substrate Binding.
J.Biol.Chem., 288, 2013
6NOI
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Crystal structure of Tsn15 in apo form
Descriptor: DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, TRIETHYLENE GLYCOL, ...
Authors:Little, R, Paiva, F.C.R, Dias, M.V.B, Leadlay, P.
Deposit date:2019-01-16
Release date:2019-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Unexpected enzyme-catalysed [4+2] cycloaddition and rearrangement in polyether antibiotic biosynthesis
Nat Catal, 2019
1Y4F
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T-To-T(High) quaternary transitions in human hemoglobin: betaW37A deoxy low-salt (10 test sets)
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kavanaugh, J.S, Rogers, P.H, Arnone, A.
Deposit date:2004-11-30
Release date:2004-12-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
3NN2
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Structure of chlorite dismutase from Candidatus Nitrospira defluvii in complex with cyanide
Descriptor: CYANIDE ION, Chlorite dismutase, GLYCEROL, ...
Authors:Kostan, J, Sjoeblom, B, Maixner, F, Mlynek, G, Furtmueller, P.G, Obinger, C, Wagner, M, Daims, H, Djinovic-Carugo, K.
Deposit date:2010-06-23
Release date:2010-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural and functional characterisation of the chlorite dismutase from the nitrite-oxidizing bacterium "Candidatus Nitrospira defluvii": Identification of a catalytically important amino acid residue
J.Struct.Biol., 172, 2010
1Y2A
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Structure of mammalian importin bound to the non-classical PLSCR1-NLS
Descriptor: Importin alpha-2 Subunit, decamer fragment of Phospholipid scramblase 1
Authors:Chen, M.-H, Ben-Efraim, I, Mitrousis, G, Walker-Kopp, N, Sims, P.J, Cingolani, G.
Deposit date:2004-11-22
Release date:2005-02-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Phospholipid Scramblase 1 Contains a Nonclassical Nuclear Localization Signal with Unique Binding Site in Importin alpha
J.Biol.Chem., 280, 2005
6NW4
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Evolution of a computationally designed Kemp eliminase
Descriptor: 6-NITROBENZOTRIAZOLE, Indole-3-glycerol phosphate synthase, SULFATE ION
Authors:Bunzel, A, Mittl, P, Hilvert, D.
Deposit date:2019-02-06
Release date:2019-07-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Emergence of a Negative Activation Heat Capacity during Evolution of a Designed Enzyme.
J.Am.Chem.Soc., 141, 2019
1Y4P
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T-To-T(high) quaternary transitions in human hemoglobin: betaW37E deoxy low-salt (10 test sets)
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kavanaugh, J.S, Rogers, P.H, Arnone, A.
Deposit date:2004-12-01
Release date:2004-12-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
3NDA
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BU of 3nda by Molmil
Crystal structure of serpin from tick Ixodes ricinus
Descriptor: PENTAETHYLENE GLYCOL, Serpin-2
Authors:Rezacova, P, Kovarova, Z, Chmelar, J, Mares, M.
Deposit date:2010-06-07
Release date:2010-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A tick salivary protein targets cathepsin G and chymase and inhibits host inflammation and platelet aggregation.
Blood, 117, 2011
4M6L
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Crystal structure of human dihydrofolate reductase (DHFR) bound to NADP+ and 5,10-dideazatetrahydrofolic acid
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Dihydrofolate reductase, N-(4-{2-[(6S)-2-amino-4-oxo-1,4,5,6,7,8-hexahydropyrido[2,3-d]pyrimidin-6-yl]ethyl}benzoyl)-L-glutamic acid, ...
Authors:Bhabha, G, Ekiert, D.C, Wright, P.E, Wilson, I.A.
Deposit date:2013-08-09
Release date:2013-09-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Divergent evolution of protein conformational dynamics in dihydrofolate reductase.
Nat.Struct.Mol.Biol., 20, 2013
4M85
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Crystal structure of N-acetyltransferase from Staphylococcus aureus Mu50
Descriptor: N-acetyltransferase
Authors:Srivastava, P, Khandokar, Y, Forwood, J.K.
Deposit date:2013-08-12
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Expression,purification and X-ray crystallography of N-acetyltransferase from Staphylococcus aureus
To be Published
4M9O
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Crystal Structure of monomeric zebrafish beta-2-microglobulin
Descriptor: Beta-2-microglobulin
Authors:Wu, P.H, Lai, M.H, Li, C.H, Chang, C.C, Chen, C.J.
Deposit date:2013-08-15
Release date:2014-09-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal Structure of monomeric zebrafish beta-2-microglobulin
To be Published
6NLO
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BU of 6nlo by Molmil
Human ABCC6 NBD1 H812A in Apo state
Descriptor: Multidrug resistance-associated protein 6, SULFATE ION
Authors:Zheng, A, Thibodeau, P.H.
Deposit date:2019-01-08
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.85021973 Å)
Cite:Structures of human ABCC6 NBD1 and NBD2
To be published
1K7Y
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BU of 1k7y by Molmil
E. coli MetH C-terminal fragment (649-1227)
Descriptor: COBALAMIN, SULFATE ION, methionine synthase
Authors:Bandarian, V, Pattridge, K.A, Lennon, B.W, Huddler, D.P, Matthews, R.G, Ludwig, M.L.
Deposit date:2001-10-22
Release date:2001-12-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Domain alternation switches B(12)-dependent methionine synthase to the activation conformation.
Nat.Struct.Biol., 9, 2002
1K8R
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Crystal structure of Ras-Bry2RBD complex
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Protein kinase byr2, ...
Authors:Scheffzek, K, Gruenewald, P, Wohlgemuth, S, Kabsch, W, Tu, H, Wigler, M, Wittinghofer, A, Herrmann, C.
Deposit date:2001-10-25
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Ras-Byr2RBD complex: structural basis for Ras effector recognition in yeast.
Structure, 9, 2001
7OIN
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BU of 7oin by Molmil
Crystal structure of LSSmScarlet - a genetically encoded red fluorescent protein with a large Stokes shift
Descriptor: LSSmScarlet - Genetically Encoded Red Fluorescent Proteins with a Large Stokes Shift, SODIUM ION, SULFATE ION
Authors:Boyko, K.M, Nikolaeva, A.Y, Dorovatovskii, P.V, Subach, O.M, Vlaskina, A.V, Agapova, Y.K, Ivashkina, O.I, Popov, V.O, Subach, F.V.
Deposit date:2021-05-12
Release date:2022-02-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:LSSmScarlet, dCyRFP2s, dCyOFP2s and CRISPRed2s, Genetically Encoded Red Fluorescent Proteins with a Large Stokes Shift.
Int J Mol Sci, 22, 2021
4LQR
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Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens
Descriptor: CALCIUM ION, Glycosyl hydrolase, family 31/fibronectin type III domain protein
Authors:Grondin, J.M, Furness, H.S, Duan, D, Spencer, C.A, Allingham, J.S, Smith, S.P.
Deposit date:2013-07-19
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
Plos One, 12, 2017
3NJS
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BU of 3njs by Molmil
Crystal structure of the complex formed between typeI ribosome inactivating protein and lactose at 2.1A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein, ...
Authors:Pandey, N, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-06-18
Release date:2010-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the complex formed between typeI ribosome inactivating protein and lactose at 2.1A resolution
To be Published
1Y46
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T-To-T(High) quaternary transitions in human hemoglobin: betaW37Y deoxy low-salt (10 test sets)
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kavanaugh, J.S, Rogers, P.H, Arnone, A.
Deposit date:2004-11-30
Release date:2004-12-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
8X4I
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Crystal structure of the D117A mutant of DIMT1 in complex with 5'-methylthioadenosine from Pyrococcus horikoshii
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Probable ribosomal RNA small subunit methyltransferase A, ZINC ION
Authors:Saha, S, Dutta, A, Kanaujia, S.P.
Deposit date:2023-11-15
Release date:2024-08-28
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural and functional characterization of archaeal DIMT1 unveils distinct protein dynamics essential for efficient catalysis.
Structure, 2024
4LUV
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Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions
Descriptor: 1-(3-methylphenyl)-5-phenyl-1H-pyrazole-3-carboxylic acid, 5-(3-chloro-4-fluorophenyl)furan-2-carboxylic acid, Replication protein A 70 kDa DNA-binding subunit
Authors:Feldkamp, M.D, Frank, A.O, Kennedy, J.P, Waterson, A.G, Olejnczak, E.O, Pelz, N.F, Patrone, J.D, Vangamudi, B, Camper, D.V, Rossanese, O.W, Fesik, S.W, Chazin, W.J.
Deposit date:2013-07-25
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Discovery of a potent inhibitor of replication protein a protein-protein interactions using a fragment-linking approach.
J.Med.Chem., 56, 2013

224931

PDB entries from 2024-09-11

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